prot_F-serratus_M_contig135.2612.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig135.2612.1
Unique Nameprot_F-serratus_M_contig135.2612.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length874
Homology
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: D7FMM0_ECTSI (DNA repair protein RadA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM0_ECTSI)

HSP 1 Score: 817 bits (2110), Expect = 7.230e-285
Identity = 456/642 (71.03%), Postives = 499/642 (77.73%), Query Frame = 0
Query:  152 PMPRMVSWGLNSRSQPSARKALGSSSKTHTIVHVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHG---ISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLPMEGFSTPTRLSDVVEAEGQDRLPLPGTELPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFGFQGVDPAS----ADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSPGSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVPFTPRRRSSAGAAAGHRKDKESGAKRAEASESVASSGSGRGRIEVVECRTLKDAVVAGLTSSAMPKRRRGRSSSTSSRRSSIEGEG 786
            PMPRMVSWGLNSRSQPSARKALGS+ KTHTIV+VCEVCGSEH+QWVGRCPTCKEWN VKPFKVRREQ GSSPSR ++     ++ G    G G+SG D EF GL G  FG  S G GWLP EGF+ PT LS+V EAE Q R+PLPGTELPRVLGGGLV GS+ MLGGDPGVGKSTLLLQLAGQL                               + A+ V + ++ R GTVVY+SGEENNSQVAARAARMGI  VDL+LYCETD+DVI+DQ      M+ M+P+PALVMVDSIQTMRT DS SSPGSVTQVKECASRLVRLAK SG+TV IVGHV KSG+IAGPKVVEHMVDTVLYLEGDRF+SYRLLRSVKNRFGPSNEIGVFQM + GL+DVADPSMLFLS K+   D          MDGSAVCVYMEGSRPILCELQSLVTY+RLPSPRRTSDGLPI RLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETA+DLAVALA+VSSY T+PVR DTCF+GEIGLGGELRPVQQL RRIQEAETFGFSRVVVPFT + RS+     G      +G  R  A  S A +   RG IEV+ECR LKDAV AGLT  A+PK+R G      SRRS  +G G
Sbjct:  111 PMPRMVSWGLNSRSQPSARKALGSNKKTHTIVYVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQ-GSSPSRVSRAAAASVTAGARGGGRGASGGDPEFSGLGGGAFGG-SGGAGWLPEEGFAAPTLLSEVGEAEKQGRMPLPGTELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDATPVTEAERCRAGTVVYISGEENNSQVAARAARMGIGGVDLFLYCETDIDVIIDQ------MLVMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMEAGGLDDVADPSMLFLSDKNVDDDDH-----AEHMDGSAVCVYMEGSRPILCELQSLVTYTRLPSPRRTSDGLPIPRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRPDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSARSRGGGR-----AGKARVAAGVSEAGNDGRRGAIEVIECRNLKDAVAAGLT--AVPKKRGG-----GSRRSGGKGRG 727          
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: A0A836CK68_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK68_9STRA)

HSP 1 Score: 442 bits (1137), Expect = 5.990e-141
Identity = 270/576 (46.88%), Postives = 334/576 (57.99%), Query Frame = 0
Query:  151 GPMPRMVSWGLNSRSQPSARKALGSSSKTHTIVHVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLP--MEGFSTPTRLSDVVEAEGQDRLPLPGT-ELPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVD----------------------FGFQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSPGSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVP 701
            G  PR +S+GL SRS PS RKALGS SKTH  V+VCEVCG+E +QWVGRCPTCKEWNSV+  KVRR+                  G                            GWL    +G+   TRL+D+   E Q R+ LPG  E  RVLGGGLV GS+ M+GGDPGVGKSTLLLQLAG+LA              D                                              +G+VVYVSGEE+  Q+AARA R+G+   +LYL  ETD+ +I D     C      P PALV++DSIQTM++ D +S+ GS TQV++ AS L+RLAK + + V+I+GHV KSG IAGP+ VEHMVDTVLYLEGD  ++YRLLRSVKNRFG  +EIGVF+M S GL++VA+PS+LF S      D E+ +GG +  DG+AV V MEG+RP+LCE  +LVT SR+ +PRR ++G+  QRL LLLAVLQ+RL Y  SSREVY+N+VGGL++Q                                  GELR VQQL RRI EA  +GF RVVVP
Sbjct:   82 GTRPRFISYGLQSRSAPSTRKALGSGSKTHATVYVCEVCGAEQVQWVGRCPTCKEWNSVREHKVRRD------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXAGWLVPGADGYGIATRLTDITSEEAQRRVELPGAAEFARVLGGGLVPGSMVMIGGDPGVGKSTLLLQLAGRLAGXXXXXXXXXXXXSDTEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGSVVYVSGEESTGQIAARAQRLGLQSPNLYLLAETDIHMICDGLEAMC------PPPALVVIDSIQTMQSPDLSSAAGSTTQVRDTASCLLRLAKSTDIAVVIIGHVTKSGDIAGPRTVEHMVDTVLYLEGDPLNAYRLLRSVKNRFGSCHEIGVFEMTSLGLQEVANPSLLFTSTA-LGDDDEDGEGGGQAPDGTAVLVAMEGTRPLLCE--ALVTPSRMVAPRRAAEGVGQQRLQLLLAVLQRRLRYPTSSREVYVNVVGGLRLQ----------------------------------GELRMVQQLQRRIAEAGKYGFKRVVVP 596          
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: A0A7S4HL01_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HL01_9STRA)

HSP 1 Score: 407 bits (1045), Expect = 1.340e-126
Identity = 281/660 (42.58%), Postives = 361/660 (54.70%), Query Frame = 0
Query:  154 PRMVSWGLN-SRSQPSARKALGSSSKTHTIVHVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLPMEGFST---PTRLSDVVEAEGQD------------RLPLPGTE-LPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFGFQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMD------------------QAREGCLMVAMEPRPALVMVDSIQTMRTADSASSP-GSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSS-----YRLLRSVKNRFGPSNEIGVFQMLST--GLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLP----SPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKV-----QETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVPFTPRRRSSAGAAAGHRKDKESGAKRAEASESVASSGSGRGRIEVVECRTLKDAVVAGLTS 761
            P M+S+GL   RS PS RKA+G S  + T VHVC  CGSE+++W+GRCPTCKEWN+++ F+V R   G +      +G S   GS+ +  S D         D      R   WL      T   P R++D+ E  G D            RL +PG E L  VLGGG++ GSL +LGGDPGVGKSTLLLQ AG +AS            +    +G+     D +      Q  + G V+YVSGEEN  QVA+RAAR+GI E +L   CET+ D I D                  +  E       +  P LV++DSIQTM      SS  G VTQV+EC    +RLAK +G  +++VGHV KSG +AGP+ VEHMVD VLYLEGDR SS      R+LRS KNRFG S E+GV++M      L  V+DPS LFLS +            T D DG A+ V +EG R I  E+Q+LV  S +     S RRT DG+   RLLL+LAVLQKR G   S  +V++N+VGG+++     Q + SD+A A+A+VSS   + VR+DTCFVGE+GL GELR V  L +R+ EA   GFSR+V P   RR      + G R               V   G+    IE V+C  L DA+ AGL S
Sbjct:   79 PGMMSFGLGRGRSAPSHRKAVGRSGSSSTSVHVCTNCGSEYVKWIGRCPTCKEWNTIQEFRVNRGGPGGA------NGSS--FGSIRSRPSFDGES------DVRVGHPRKTTWLDGVEIGTSHKPVRMTDIYEEMGFDSENPSSFRPGDNRLCVPGDEELNNVLGGGIMPGSLTLLGGDPGVGKSTLLLQTAGAVAS------------LSLPSRGIGMGKDDNS------QDKQCGPVIYVSGEENAMQVASRAARLGIRETELLFLCETNADFISDTVASYYDRTLGESIDFSSEKEEASYQAGPQRPPCLVVIDSIQTMICDSGGSSAAGGVTQVRECVGVFLRLAKITGTPIVLVGHVTKSGGVAGPRTVEHMVDCVLYLEGDRSSSGGLNHLRMLRSAKNRFGSSEEVGVYEMHQRYGKLVPVSDPSSLFLSNRF----------DTFDSDGCAITVVLEGMRAITVEVQALVAPSSIGGKSFSGRRTVDGISTARLLLILAVLQKRCGVSFSRFDVFINVVGGIRLSNGSRQGSESDVATAVALVSSLTGIAVRADTCFVGEVGLLGELRQVSSLEKRVNEARRMGFSRIVTPDLGRR------SRGRR---------------VREKGNYVDGIEWVKCENLLDAISAGLVS 675          
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: A0A838RJB1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RJB1_9CHLR)

HSP 1 Score: 390 bits (1002), Expect = 1.360e-123
Identity = 232/524 (44.27%), Postives = 318/524 (60.69%), Query Frame = 0
Query:  183 VHVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLPMEGFSTPTRLSDVVEAEGQDRLPLPGTELPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFGFQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSPGSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVPFTPRR 706
            V++C  CG+EH +WVGRC  C EWN++       E+    P         R  GS G                 FG ++R  G L +   + P ++ D+ EA   +R+PLP  E  RVLGGG+V GSL ++GGDPG+GKSTLL Q++G LA                                       +G V+Y+SGEE+  QV  RA R+G+++ DLYL  ET++D+ ++             RP  V++DSIQT+   D +SS GS++QV+ECA+RL++LAK   + + +VGHV K GAIAGP+V+EH+VDTVLYLEGDRF+++RLLR+ KNRFG +NE+GVF+M+  G+ +V +PS  FL+   A        G T    GSAV V MEG+RPIL E+QSLVT S    PRRT++G+ + RL LLLAVL KR+G  + +++V++N+VGGL++ E A+DLA+A AI SSY    +  D   VGEIGLGGELRPV QL +R+ EA   GF+R VVP + RR
Sbjct:    7 VYLCRECGAEHAKWVGRCRDCGEWNTL-------EETVQEP---------RASGSFG-----------------FGRQAR-AGTL-VASNNLPLKIGDI-EANAYERIPLPMEEFTRVLGGGVVPGSLVLVGGDPGIGKSTLLSQVSGMLAEA-------------------------------------LGPVLYLSGEESVYQVKMRAERLGMADKDLYLLSETNLDIAIEHINTL--------RPKAVIIDSIQTVYLQDLSSSAGSISQVRECAARLMQLAKGENLPIFLVGHVTKEGAIAGPRVLEHIVDTVLYLEGDRFNTFRLLRAQKNRFGSTNEVGVFEMVEGGMVEVPNPSEAFLADYQA--------GAT----GSAVAVTMEGTRPILVEMQSLVTQSAFSQPRRTANGVDMNRLHLLLAVLGKRVGLQLFNQDVFVNVVGGLRISEPAADLAIAAAITSSYREKSIPRDLALVGEIGLGGELRPVSQLDKRLNEAAKLGFTRCVVPKSGRR 437          
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: A0A1W9UIT2_9CHLR (DNA repair protein RadA (Fragment) n=1 Tax=Anaerolineaceae bacterium 4572_32.1 TaxID=1971623 RepID=A0A1W9UIT2_9CHLR)

HSP 1 Score: 384 bits (987), Expect = 7.270e-122
Identity = 228/527 (43.26%), Postives = 318/527 (60.34%), Query Frame = 0
Query:  175 SSSKTHTIVHVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLPMEGFSTPTRLSDVVEAEGQDRLPLPGTELPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFGFQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSPGSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVP 701
            S S+T T+ ++C+ CGS  L+W+GRCP C EWN++    V R+       R A H     L                      GAES+            P RL+DV   +  +R+ LP  E  RVLGGG+VRGSL ++GGDPG+GKSTLLLQ+A                                    L TQ+   G V+YVSGEE+  Q+  R+ R+GI    LYL  ET++DVI    ++         +P +V+VDSIQT+   D  S+ GSV+QV+E AS+L+RLAK  G+++ +VGHV K+G+IAGP+V+EH+VDTVLYLEGDRF +YRLLRSVKNRFGP++E+GVF+M   G+++VA+PS  FL+ +              +  GSA+ V MEG+RP+L E+Q+L + +    PRRT++G+ + RLLLL+AVL KR+G  +S ++V+ N+VGGL++ E A+DLA+A A+ SS+  +PV +D   VGEIGL GELR V Q+ RR+ EA   GF R ++P
Sbjct:    2 SKSRTKTV-YLCQECGSSQLKWMGRCPDCGEWNTLVETIVERD-------RRAPHSSQMSLS---------------------GAESK------------PQRLADV-GTDNMERITLPMPEFSRVLGGGVVRGSLVLIGGDPGIGKSTLLLQVAS-----------------------------------LLTQK---GDVLYVSGEESAQQIKMRSQRLGIESNSLYLLTETNLDVISAHIQQL--------KPHVVVVDSIQTVYIEDLNSAAGSVSQVRESASQLMRLAKSQGVSIFLVGHVTKTGSIAGPRVLEHIVDTVLYLEGDRFHTYRLLRSVKNRFGPTSEVGVFEMAQQGMKEVANPSEAFLAERWP------------NAAGSAIAVTMEGTRPLLVEIQALSSATSFRLPRRTANGIDLNRLLLLVAVLSKRVGLQLSDQDVFANVVGGLRIAEPAADLALATAVASSFQNIPVAADMVVVGEIGLSGELRMVGQVERRLNEASKLGFRRCLMP 428          
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: A0A800BRF5_9CHLR (DNA repair protein RadA n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A800BRF5_9CHLR)

HSP 1 Score: 384 bits (985), Expect = 3.470e-121
Identity = 230/527 (43.64%), Postives = 309/527 (58.63%), Query Frame = 0
Query:  184 HVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLPMEGFSTPTRLSDVVEAEGQDRLPLPGTELPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFGFQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSPGSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVPFTPRRRSSA 710
            ++C+ CG    +W+GRCP C EWN++    V RE+              R   SV                            +P    S P  L  +  AEG +R+P+P  EL RVLGGG+V GS+ ++GGDPG+GKSTLLLQL+  LASP                                      G V+Y+SGEE+  Q+  RA R+GI+   LY+  E ++D I++              P +V+VDSIQ++ + +  S+ GSV QVKECAS L+RLAK +G+ + +VGHV K+GAIAGPKV+EH+VD VLYLEGDRF +YRLLRSVKNRFG +NE+GVF+M   GL +VA+PS  FL+ +              +  GSA+ V MEG+RP+L E+Q+L + +    PRRT++G+   RLLLL+AVL KR+G  +S +++++N+VGGLKV E A+DLA+A+AI SSY  VPV +D   VGEIGL GELR V QL RR+ EA   GF R VVP + RRR  A
Sbjct:   10 YICQNCGYSSPKWMGRCPNCGEWNTLVETVVEREE--------------RPRPSV----------------------------MPT---SEPQPLPQI-SAEGFERIPVPIGELSRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLSSLLASPD-------------------------------------GAVLYISGEESPQQIKMRADRLGIANQALYILAEVNLDQIINHIERL--------NPKMVVVDSIQSVYSEELMSAAGSVGQVKECASTLLRLAKATGIPIFLVGHVTKAGAIAGPKVLEHIVDAVLYLEGDRFHAYRLLRSVKNRFGSTNEVGVFEMGDRGLAEVANPSEAFLAER------------LPNASGSAIAVTMEGTRPLLVEIQALTSTTSFGHPRRTANGVDFNRLLLLVAVLSKRVGLRLSDQDIFVNVVGGLKVNEPAADLAIAVAIASSYKNVPVAADMAIVGEIGLSGELRAVSQLERRLSEAAKLGFRRCVVPKSLRRRVKA 433          
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: A0A0N0RFU1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0N0RFU1_9CHLR)

HSP 1 Score: 381 bits (978), Expect = 4.730e-120
Identity = 228/528 (43.18%), Postives = 306/528 (57.95%), Query Frame = 0
Query:  178 KTHTIVHVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLPMEGFSTPTRLSDVVEAEGQDRLPLPGTELPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFGFQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSPGSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVPFTPR 705
            K    V+VCE CG+EH +W GRC TC  +NS+K FK+       +P    +H     LG+                                   + P RL++V EAE   R+PL   E  RVLGGG+V GSL ++GGDPG+GKSTLLLQ+AG+LA                                      R G V+YVSGEE+  Q+  RA R+GI   DLYL  ET+++ I+   +       + PR   V+VDSIQT+     ASS GSVTQV+ECA+RL++ AK   + + +VGHV KSG IAGP+V+EH+VD VLYLEGDR  +YRLLRSVKNRFG ++E+GVF+M   G+ +VA+PS LFL    A            D  G+A+ V +EG+R +L E+Q+L T +    PRRT+ G  + RL LL+AVL KR+G  + ++++++N+VGGL++ E A+DLAVALAI SSY   P+      +GEIGLGGELRPV QL +R+ EA   GF+  +VP T R
Sbjct:    4 KKARTVYVCEECGAEHPKWGGRCLTCGAYNSLKEFKI-------APEPSTRHTAQTWLGAS---------------------------------DNPPRRLTEV-EAEAMQRIPLTNREFARVLGGGIVPGSLVLIGGDPGIGKSTLLLQVAGELAE-------------------------------------RQGVVLYVSGEESTHQIRMRAERLGIHAADLYLLSETNLERIVAHIQH------LHPRA--VIVDSIQTVYLDSLASSAGSVTQVRECAARLLQTAKILNIPIFLVGHVTKSGDIAGPRVLEHIVDAVLYLEGDRLHAYRLLRSVKNRFGSTHEVGVFEMAERGMLEVANPSELFLGDHRA------------DPTGAAIAVTLEGTRALLVEIQALSTTTAFSQPRRTATGFDLNRLYLLIAVLTKRVGLKLHNQDIFVNVVGGLRIAEPAADLAVALAIASSYREKPISRRMAAIGEIGLGGELRPVGQLEKRLSEAAKLGFTHCLVPKTSR 433          
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: A0A482SXN0_9ARCH (DNA repair protein RadA n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXN0_9ARCH)

HSP 1 Score: 384 bits (985), Expect = 1.300e-119
Identity = 227/559 (40.61%), Postives = 330/559 (59.03%), Query Frame = 0
Query:  148 AGVGPMPRMVSWGLNSRSQPSARKALGSSSKTHTIVHVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLPMEGFSTPTR--LSDVVEAEGQDRLPLPGTELPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFGFQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSPGSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSR---LPSPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVP 701
            AG+  + R   +G+  R      KALG   K     +VCEVCG+EH++W GRC +CKEWN++K FKV R    S                         L+ R     +   ++R   W+ ++  +  T   +S +   + + RL +   E+ RVLGGGLV+GS+ +L G+PGVGKST+LLQLA  +A                                      +   VVY+SGEEN  Q+A R  R+ ++  ++YL C+ ++D ++D      ++      P+L++VDSIQTMRTAD   S GSV+Q+++ A+RLV+ AK +  ++I+VGHV K G +AGP+V+EHMVDT+LYLEG   + +R+LR+VKNRFG +NE+GV  M   G++DV++PS LF+          NS   T   +GSAV V MEGSR +L E+Q LV++S      + RR +DG PIQRLLL+ AV++KRL   + SR+VYLN+VGGL++ E  +DLAVA+AIVSS  ++ ++  T F+GE+GLGGELR  +++ +RI EA   GF RV++P
Sbjct:   23 AGLSKLSRKHIYGVAVRHSQLFAKALG--FKASAEAYVCEVCGTEHVKWQGRCNSCKEWNTIKAFKVARASSNSYL---------------------PPLDSRVSAAQSSSTKAR---WINVDVVTNSTLQPMSSIETEDSKQRLTMYSQEVNRVLGGGLVKGSVTLLAGEPGVGKSTILLQLASDIAK-------------------------------------KYTNVVYISGEENQFQLAMRGKRLHLNTDNIYLICDVEMDRVLD------MVSTFHTSPSLLIVDSIQTMRTADCQGSIGSVSQIRDTAARLVQFAKSTSTSIILVGHVTKMGDVAGPRVLEHMVDTLLYLEGSDSADHRILRTVKNRFGSANEVGVLTMTEDGMQDVSNPSALFI----------NSRTLTEAQEGSAVMVAMEGSRALLAEVQCLVSFSYGSGKVAARRAADGFPIQRLLLICAVIEKRLRLSLGSRDVYLNVVGGLRISEPTADLAVAMAIVSSLTSIAIQPATVFIGELGLGGELRGGKRVEQRIGEAIARGFKRVILP 502          
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: A0A7C3B6J2_9CHLR (DNA repair protein RadA n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3B6J2_9CHLR)

HSP 1 Score: 377 bits (967), Expect = 1.600e-118
Identity = 221/524 (42.18%), Postives = 312/524 (59.54%), Query Frame = 0
Query:  184 HVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLPMEGFSTPTRLSDVVEAEGQDRLPLPGTELPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFGFQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSPGSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVPFTPRRR 707
            +VC+ CGS H++W+GRCP C EWN++    +  ++    P+R A+              +  D+                          +P  L D+  A+G +R+P+P  EL RVLGGG+V GS+ ++GGDPG+GKSTLLLQL   LA            D D                           V+Y+SGEE+ +Q+  RAAR+GI+   LY+  +T ++ I+ Q         M PR  + +VDSIQ + T    S+ GSV+QV+ECA++L+RLAK   + + +VGHV K G IAGP+V+EHMVDTVLYLEG+RF +YR+LRSVKNRFG +NE+GVF+M+  G+++V +PS  FL+ +              +  GSA+ V +EG+RP+L E+Q+L + +  PSPRRT +G+   RLLLL+AVL KR+G  +S ++V++N+VGGL V+E A+DLAVA AI SS   VPV +D   +GE+GL GELR V QLARR+ EA   GF R +VP +  RR
Sbjct:    8 YVCQQCGSAHMKWMGRCPDCGEWNTLVETVIEEDR---GPARRAR--------------ATSDV--------------------------SPVPLPDIA-ADGFERIPVPMGELSRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLCALLAE-----------DQD---------------------------VLYISGEESATQIKMRAARLGINNPHLYILADTHLETILAQIEH------MNPR--IAVVDSIQAIYTDALTSAAGSVSQVRECAAQLLRLAKAQAIPIFLVGHVTKEGTIAGPRVLEHMVDTVLYLEGERFHTYRILRSVKNRFGSTNEVGVFEMVECGMQEVPNPSEAFLAERMP------------NAAGSAIAVTLEGTRPLLVEIQALSSTTSFPSPRRTGNGVDFNRLLLLVAVLSKRVGLRLSDQDVFVNVVGGLTVREPAADLAVACAIASSVRNVPVAADLAIIGEVGLSGELRSVHQLARRLSEAGQLGFRRCLVPKSGLRR 429          
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Match: UPI0019DAC4F5 (DNA repair protein RadA n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019DAC4F5)

HSP 1 Score: 375 bits (963), Expect = 6.470e-118
Identity = 222/521 (42.61%), Postives = 309/521 (59.31%), Query Frame = 0
Query:  183 VHVCEVCGSEHLQWVGRCPTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFRGLRGDTFGAESRGVGWLPMEGFSTPTRLSDVVEAEGQDRLPLPGTELPRVLGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFGFQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEVDLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSPGSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVLYLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPKHASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVALAIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVVPFT 703
            V++C+ CG+ H +W+GRCP C  W+S+     R++             ISR                  L+ +T  A +R +             LS+V   E   RLP+ GTEL RVLGGGLV GS+ ++GGDPG+GKSTLL Q+A Q A+                                     ++G  +YVS EE+  Q+  R+ RMG++  +LY+  ET++D+I+ Q            RP L +VDSIQT+   D +S+ GSV+QV+E A RL+RLAK SG+ + IVGHV K GAIAGP+V+EH+VDTVLYLEGDRF  YRLLRSVKNRFG +NE+GVF+M   G+ +V++PS +FLS ++A            D  GS V V +EG+RPIL E+Q+L   +    PRRT +G  + RLL+++AVL KR G+ + S++VY+N+VGGL++ E A+DLAVA+AI SSY    V+S+   VGE+GL GELR + Q+ RR+ EA   GF+  ++P T
Sbjct:    7 VYICQQCGAHHTRWMGRCPECNTWDSLVEHVERKDS------------ISRSK----------------LKSNT--AANRAI------------PLSEVASGEFA-RLPVLGTELTRVLGGGLVPGSVVLIGGDPGIGKSTLLTQVAAQFAN-------------------------------------QIGQSLYVSAEESPQQIKLRSDRMGLTSKELYVLGETNLDIILQQIDTL--------RPRLAIVDSIQTVYLEDISSAAGSVSQVREGALRLLRLAKESGIPIFIVGHVTKEGAIAGPRVLEHIVDTVLYLEGDRFHQYRLLRSVKNRFGSTNEVGVFEMTQDGMAEVSNPSQVFLSERNA------------DTPGSTVAVTLEGTRPILVEVQALTANTASAQPRRTVNGFDMNRLLVIIAVLSKRAGFPLFSQDVYVNVVGGLRITEPAADLAVAVAIASSYRNQRVKSNLVLVGEVGLSGELRNISQIERRMGEAAKLGFTMSLIPST 427          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig135.2612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMM0_ECTSI7.230e-28571.03DNA repair protein RadA n=1 Tax=Ectocarpus silicul... [more]
A0A836CK68_9STRA5.990e-14146.88P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4HL01_9STRA1.340e-12642.58Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A838RJB1_9CHLR1.360e-12344.27DNA repair protein RadA n=1 Tax=Ardenticatenales b... [more]
A0A1W9UIT2_9CHLR7.270e-12243.26DNA repair protein RadA (Fragment) n=1 Tax=Anaerol... [more]
A0A800BRF5_9CHLR3.470e-12143.64DNA repair protein RadA n=1 Tax=Anaerolineae bacte... [more]
A0A0N0RFU1_9CHLR4.730e-12043.18DNA repair protein RadA n=1 Tax=Ardenticatena mari... [more]
A0A482SXN0_9ARCH1.300e-11940.61DNA repair protein RadA n=1 Tax=archaeon TaxID=190... [more]
A0A7C3B6J2_9CHLR1.600e-11842.18DNA repair protein RadA n=1 Tax=Caldilineae bacter... [more]
UPI0019DAC4F56.470e-11842.61DNA repair protein RadA n=1 Tax=Chloroflexi bacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 307..506
e-value: 3.8E-7
score: 39.8
IPR041166LapB, rubredoxin metal binding domainPFAMPF18073Rubredoxin_2coord: 184..211
e-value: 2.2E-10
score: 40.0
NoneNo IPR availablePFAMPF13481AAA_25coord: 370..484
e-value: 4.4E-10
score: 39.5
NoneNo IPR availableGENE3D3.40.50.300coord: 288..544
e-value: 3.8E-35
score: 123.2
NoneNo IPR availablePFAMPF13541ChlIcoord: 619..702
e-value: 4.8E-11
score: 42.6
NoneNo IPR availablePANTHERPTHR32472:SF10DNA REPAIR PROTEIN RADA-LIKE PROTEINcoord: 183..755
NoneNo IPR availablePANTHERPTHR32472FAMILY NOT NAMEDcoord: 183..755
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..873
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 607..757
e-value: 5.0E-13
score: 51.2
IPR004504DNA repair protein RadAHAMAPMF_01498RadA_bactcoord: 197..759
score: 39.165
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 276..529
score: 8.97
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 286..480
score: 19.552
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 280..532
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 517..707

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig135contigF-serratus_M_contig135:518698..538902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig135.2612.1mRNA_F-serratus_M_contig135.2612.1Fucus serratus malemRNAF-serratus_M_contig135 518460..538902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig135.2612.1 ID=prot_F-serratus_M_contig135.2612.1|Name=mRNA_F-serratus_M_contig135.2612.1|organism=Fucus serratus male|type=polypeptide|length=874bp
MKPCIARTPFLAAATAAAMMAETCSESHSPSNLEVGVRLQHFKLFNDGYT
CNHGYVHGGTERVSSFVLTTGRWGTKPHSMARRGFFRHNTRHCPGRRFSA
GSRRVPPTSARSSSSESEIEGPYPDDHDHDHDAGGFEGAGGRGVTSGAGV
GPMPRMVSWGLNSRSQPSARKALGSSSKTHTIVHVCEVCGSEHLQWVGRC
PTCKEWNSVKPFKVRREQQGSSPSRFAKHGISRGLGSVGAGSSGDDLEFR
GLRGDTFGAESRGVGWLPMEGFSTPTRLSDVVEAEGQDRLPLPGTELPRV
LGGGLVRGSLAMLGGDPGVGKSTLLLQLAGQLASPRAGVSEREAADVDFG
FQGVDPASADTASAVLKTQQPRVGTVVYVSGEENNSQVAARAARMGISEV
DLYLYCETDVDVIMDQAREGCLMVAMEPRPALVMVDSIQTMRTADSASSP
GSVTQVKECASRLVRLAKRSGMTVIIVGHVNKSGAIAGPKVVEHMVDTVL
YLEGDRFSSYRLLRSVKNRFGPSNEIGVFQMLSTGLEDVADPSMLFLSPK
HASQDSENSDGGTRDMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRT
SDGLPIQRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETASDLAVAL
AIVSSYATVPVRSDTCFVGEIGLGGELRPVQQLARRIQEAETFGFSRVVV
PFTPRRRSSAGAAAGHRKDKESGAKRAEASESVASSGSGRGRIEVVECRT
LKDAVVAGLTSSAMPKRRRGRSSSTSSRRSSIEGEGTDGGEPEFGWQRKK
SRGEESRIELEAGSGRGLFSSGVVDDHEVDSSSLEEGGWGSRAGMGEGDG
VEDHEGFRDYGDLQEEEGERGWD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR041166Rubredoxin_2
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR004504DNA_repair_RadA
IPR003439ABC_transporter-like
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase
IPR020568Ribosomal_S5_D2-typ_fold