prot_F-serratus_M_contig1349.2597.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1349.2597.1
Unique Nameprot_F-serratus_M_contig1349.2597.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length286
Homology
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: D7FJK8_ECTSI (rRNA biogenesis protein RRP36 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK8_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 4.580e-88
Identity = 175/273 (64.10%), Postives = 201/273 (73.63%), Query Frame = 0
Query:   21 DDSDMREIK---EEQP-------LGDRIERLSHGAGPSRRRGR-RTAVGDIVQLARIKDKTTVVETRASGEGAKTRCMEEENGTGTATEKRSSSKPQKRANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKRQ 282
            DD D+ E +   EEQP       +G+R+ +LSHGAGPSRR+   R + G   + A    KT    TR SG  A  +     +G+G         K   RANKNRPQE SS R VGRFREVVV+KRK SRDPRFEGGGGSSKLNYDIFRKAYGFL  YQDSEIEELKKSLKKEK+QE S R+ +LLTRLQQE RAER +GDR R A+R++K KER+AVA GKKP++LK S+KKRLS EQRYEGLKE GKL KFMEKKRK+NAAKDHRWLP+KRQ
Sbjct:   30 DDEDLDENEAATEEQPNKEQGESIGERLIKLSHGAGPSRRKRHIRDSTGGEQKQANAA-KTARDRTR-SGIAAHQQARGGNSGSGRT-------KVPSRANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQE-RAERSQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKRQ 292          
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: A0A835YP85_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP85_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.830e-45
Identity = 100/185 (54.05%), Postives = 131/185 (70.81%), Query Frame = 0
Query:  107 KRANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQ------ELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKRQDKG 285
            KRANKN+P E+SS R VGR REVV  +R+ +RDPRF+   G+  LNYD+FRK+Y FLE YQD EI+ L+K   K K +      E ++   +LLT++QQE RAER R D  R AL Q +  E +AVA GK PY++K  D++ L+ E RYE L+ +GK+ KF++KKRKRNAAKD RW+PAKRQ+ G
Sbjct:  176 KRANKNQPMEMSSKRAVGRHREVVEVRRRRARDPRFDAATGT--LNYDMFRKSYEFLEGYQDGEIDALRKEAAKAKKRRGDGSAERAAAAKALLTKMQQE-RAERKRADATRAALSQRRKAEAEAVAKGKAPYFMKARDRRALALETRYEELRREGKVQKFVQKKRKRNAAKDRRWMPAKRQNTG 357          
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: T0S1H5_SAPDV (rRNA biogenesis protein RRP36 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S1H5_SAPDV)

HSP 1 Score: 159 bits (403), Expect = 1.400e-44
Identity = 92/177 (51.98%), Postives = 129/177 (72.88%), Query Frame = 0
Query:  107 KRANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKRQD 283
            KRANKN P+E++S R V RFREV+  ++KASRDPRF+   G  KLN D+F+KAY FLE Y+D+E++E+KK LKK K     + +   L   +QE RAE +R D+ REA ++ K +ER+AVA+GK  +YLK  DKK++  + +Y+ L+E G+L KFM K+RK+NA KDHRWLP +R++
Sbjct:   45 KRANKNCPREMTSKRPVARFREVLQIRKKASRDPRFDAASG--KLNEDLFKKAYTFLEDYKDAELDEVKKQLKKAKSATRKAALKEELASRKQE-RAETHRADKIREATQKRKREEREAVANGKSAFYLKRKDKKQVELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQRKE 218          
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: A0A1V9YXH6_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YXH6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 5.190e-43
Identity = 89/175 (50.86%), Postives = 126/175 (72.00%), Query Frame = 0
Query:  107 KRANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKR 281
            KRANKN P+E++S R V RFREV+  ++K SRDPRF+   G  KLN D+F+K+Y FLE Y+D+E++++KK L+K K +     + + L   +QE RAE +R DR REA  + K +ER+AVA+GK  +YLK  DKK++  + +Y+ L+E G+L KFM K+RK+NA KDHRWLP +R
Sbjct:   41 KRANKNCPREMTSKRPVARFREVLQIRKKGSRDPRFDNASG--KLNEDLFKKSYAFLEDYKDAELDDVKKQLRKAKSKTRREELKADLATRKQE-RAESHRADRIREATLKRKREEREAVANGKSAFYLKRKDKKQIELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQR 212          
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: A0A1V9YU59_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YU59_9STRA)

HSP 1 Score: 150 bits (378), Expect = 6.060e-41
Identity = 89/175 (50.86%), Postives = 119/175 (68.00%), Query Frame = 0
Query:  107 KRANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKR 281
            KRANKN P+E++S + V RF+EV+  K+K +RDPRF G  G  KLN D+FRK+Y F+E Y++ E+E++KK LKK K           L   +QE RAE  R  R REA  + K +ER+AVA GK  +YLK  DKK++  + +YE L+E G+L KFM K+RK+NA KDHRWLP +R
Sbjct:   37 KRANKNCPREMTSKKPVARFKEVIQVKKKGTRDPRFSGASG--KLNEDLFRKSYAFVEDYKNQELEQVKKQLKKAKXXXXXXXXXXELVTRKQE-RAETKRAGRIREATHKRKREEREAVAQGKNAFYLKRKDKKQVELKAKYEELQESGRLSKFMAKRRKKNANKDHRWLPTQR 208          
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: A0A7S2Y0G1_9STRA (rRNA biogenesis protein RRP36 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G1_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.370e-40
Identity = 104/190 (54.74%), Postives = 125/190 (65.79%), Query Frame = 0
Query:  107 KRANKNRPQEVSSSRGVGRFREVVV---------SKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIE----ELKKSLKKEKD-QELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKP-YYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKR 281
            KR NKNRP E SS   VGR+R+V V         +++   RDPRFEG  G  K+NYD+FRK Y FLE YQDSEI+    ELKK+ KK K   E  S V   L +L+QE R++R RGDR R  L   K  ER+AV  GKK  +YLK   KK +  EQRY+ LKE+G+L KFMEKKRK+NA+KDHRWLPA R
Sbjct:   33 KRENKNRPVERSSKVPVGRYRDVAVRPGDGSQSTAQKYQPRDPRFEGVSG--KMNYDLFRKTYQFLEQYQDSEIQALEAELKKAQKKSKSGAERVSEVQLALQKLRQE-RSQRVRGDRVRGVLGAHKKLERRAVQQGKKKAFYLKGKAKKEIVLEQRYQELKEKGQLKKFMEKKRKKNASKDHRWLPAAR 219          
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: A0A662WCQ7_9STRA (rRNA biogenesis protein RRP36 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WCQ7_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.160e-39
Identity = 82/174 (47.13%), Postives = 120/174 (68.97%), Query Frame = 0
Query:  108 RANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKR 281
            RANKNRP E++S R VGRF++VV  K++   DPRFE   G  +LN D+F K+Y FL+ Y+  E+ ELK+ LK  K       +   ++ L+ + R+E+ + ++ R+AL + K +ER+AVA GK P+YLK  DKK+L  + +++ L+E G+L KFM KKRK+NA+KDHRWLP +R
Sbjct:   58 RANKNRPMELTSKRAVGRFKQVVEVKKRRVLDPRFEAQSG--RLNEDLFAKSYSFLDEYKQRELGELKRQLKSAKSTTRKEEIKHEIS-LRSQERSEKQKTEKIRDALTKRKREEREAVASGKNPFYLKRKDKKKLELQAKFQNLQETGRLSKFMAKKRKKNASKDHRWLPTQR 228          
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: G4YS32_PHYSP (rRNA biogenesis protein RRP36 n=4 Tax=Phytophthora TaxID=4783 RepID=G4YS32_PHYSP)

HSP 1 Score: 145 bits (366), Expect = 4.080e-39
Identity = 85/181 (46.96%), Postives = 123/181 (67.96%), Query Frame = 0
Query:  101 SSSKPQKRANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKR 281
            S S P +RANKN+P E+SS R VGRFR+VV  K++ + DPRFE   G  +LN D+F K+Y FL+ Y+  E++ELK+ LKK K       +   +  L+Q+   E+ + ++ + AL + K +ER+AVA GK  +YLK  DKK+L  + +++ L+E G+L KFM KKRK+NA+KDHRWLP +R
Sbjct:   37 SESGPARRANKNQPLELSSKRAVGRFRQVVEVKKRRALDPRFEAQSG--RLNEDLFNKSYAFLDDYKQRELQELKQQLKKTKSVTKKDELKHEIA-LRQQEMTEKQKTEKIKSALTKRKREEREAVASGKGAFYLKRKDKKKLELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQR 214          
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: A0A3R7A8U5_9STRA (rRNA biogenesis protein RRP36 n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7A8U5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.840e-39
Identity = 85/175 (48.57%), Postives = 124/175 (70.86%), Query Frame = 0
Query:  107 KRANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKR 281
            KRANKNRP+E++S R VGRFREV+  ++K +RDPRF+   G  KLN D+F+K+Y FL+  +++E++E KK LK  K +   + +   ++  +QE  AE  R DR R+A  + K +ER+AV +GK  +YLK  DKK+L  + +++ L+E G+L KFMEK+RK+NA KDHRWLP +R
Sbjct:   80 KRANKNRPREITSKRPVGRFREVLQVRKKTTRDPRFDHASG--KLNEDLFKKSYAFLDDIKEAELQEAKKQLKHAKSKTRKTELQQDISSRKQEL-AEAKRADRIRDANLKRKREEREAVENGKGAFYLKRKDKKQLELKAKFDELQESGRLSKFMEKRRKKNANKDHRWLPTQR 251          
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Match: H3G8J4_PHYRM (rRNA biogenesis protein RRP36 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8J4_PHYRM)

HSP 1 Score: 144 bits (362), Expect = 1.320e-38
Identity = 85/181 (46.96%), Postives = 122/181 (67.40%), Query Frame = 0
Query:  101 SSSKPQKRANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSKLNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQELSSRVGSLLTRLQQESRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYEGLKEQGKLGKFMEKKRKRNAAKDHRWLPAKR 281
            S+S P +RANKN+P E+SS R VGRFR+VV  K+K S DPRFE   G  +LN D+F K+Y F++ Y+  E++ELK   +K K  +    +   +  L+Q+   E+ + D+ R AL + K +ER+AVA GK  +YLK  DKK+L    +++ L++ G+L KFM KKRK+NA+KDHRWLP +R
Sbjct:   30 SASGPARRANKNQPLELSSKRAVGRFRQVVDVKKKRSLDPRFEAQSG--RLNEDLFAKSYAFVDEYKQRELQELKSQFQKTKGGDKKDELKHEIA-LRQQEMTEKKKQDKIRSALTKRKREEREAVATGKGAFYLKRKDKKKLELHAKFQDLQDTGRLSKFMAKKRKKNASKDHRWLPTQR 207          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1349.2597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK8_ECTSI4.580e-8864.10rRNA biogenesis protein RRP36 n=2 Tax=Ectocarpus T... [more]
A0A835YP85_9STRA3.830e-4554.05rRNA biogenesis protein RRP36 n=1 Tax=Tribonema mi... [more]
T0S1H5_SAPDV1.400e-4451.98rRNA biogenesis protein RRP36 n=2 Tax=Saprolegnia ... [more]
A0A1V9YXH6_9STRA5.190e-4350.86rRNA biogenesis protein RRP36 n=1 Tax=Achlya hypog... [more]
A0A1V9YU59_9STRA6.060e-4150.86rRNA biogenesis protein RRP36 n=1 Tax=Thraustothec... [more]
A0A7S2Y0G1_9STRA4.370e-4054.74rRNA biogenesis protein RRP36 (Fragment) n=1 Tax=F... [more]
A0A662WCQ7_9STRA2.160e-3947.13rRNA biogenesis protein RRP36 n=2 Tax=Nothophytoph... [more]
G4YS32_PHYSP4.080e-3946.96rRNA biogenesis protein RRP36 n=4 Tax=Phytophthora... [more]
A0A3R7A8U5_9STRA5.840e-3948.57rRNA biogenesis protein RRP36 n=6 Tax=Aphanomyces ... [more]
H3G8J4_PHYRM1.320e-3846.96rRNA biogenesis protein RRP36 n=1 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 235..255
IPR009292rRNA biogenesis protein RRP36PFAMPF06102RRP36coord: 108..275
e-value: 6.8E-44
score: 149.8
IPR009292rRNA biogenesis protein RRP36PANTHERPTHR21738UNCHARACTERIZEDcoord: 85..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1349contigF-serratus_M_contig1349:176954..194271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1349.2597.1mRNA_F-serratus_M_contig1349.2597.1Fucus serratus malemRNAF-serratus_M_contig1349 176866..195033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1349.2597.1 ID=prot_F-serratus_M_contig1349.2597.1|Name=mRNA_F-serratus_M_contig1349.2597.1|organism=Fucus serratus male|type=polypeptide|length=286bp
MDGLNEGHDQDADMEAFSFQDDSDMREIKEEQPLGDRIERLSHGAGPSRR
RGRRTAVGDIVQLARIKDKTTVVETRASGEGAKTRCMEEENGTGTATEKR
SSSKPQKRANKNRPQEVSSSRGVGRFREVVVSKRKASRDPRFEGGGGSSK
LNYDIFRKAYGFLEAYQDSEIEELKKSLKKEKDQELSSRVGSLLTRLQQE
SRAERYRGDRAREALRQSKTKERQAVADGKKPYYLKNSDKKRLSQEQRYE
GLKEQGKLGKFMEKKRKRNAAKDHRWLPAKRQDKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009292RRP36