prot_F-serratus_M_contig1346.2562.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1346.2562.1
Unique Nameprot_F-serratus_M_contig1346.2562.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length364
Homology
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BLAST of mRNA_F-serratus_M_contig1346.2562.1 vs. uniprot
Match: D7FPD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD0_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 1.350e-41
Identity = 80/194 (41.24%), Postives = 118/194 (60.82%), Query Frame = 0 
Query:   90 PLMRRIFWVSAGQGWVVWIFSVSSAGDQNWMTSYDGSGYGIEDVNNNCDGTRSNDSACAAYEAFVATQIFATITCSVAVVIYTFAFFQPFEAQLGSTKVLGLAGGILMALATFFQMLAFIFAAKRVQENVEEWGEGYFER-GPTYGIGVATFVFGLIQATLIFLSFWAAGDGPLLSLAQELTAPKEVNIPVSSP 282
            P  R+++W   G GWVVW+ +  +AGD+NW     G GYG+      CD    NDS C A+  F A Q  AT+ CSVAV+++T +FF+P +A+ GS+K LGL GG+ MAL TF QM++ +F  K +QE     G+ +  + G TYG+G+  FVFGLIQ  ++   F  A +GPLLS  + ++   ++    ++P
Sbjct:   20 PTCRKVYWFGCGFGWVVWVLTTPAAGDENWGELPAGDGYGVA-TGFACDEGDVNDSFCTAHRNFAAAQKAATVMCSVAVLLFTVSFFRPSQARYGSSKGLGLVGGVFMALFTFCQMVSILFLVKSIQEYNRYGGDAFMAKTGDTYGLGITAFVFGLIQVIIVLGFFGQAANGPLLSCTRRISEADDMGAGSATP 212
[Close]
BLAST of mRNA_F-serratus_M_contig1346.2562.1 vs. uniprot
Match: D7FWH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH1_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.760e-8
Identity = 60/195 (30.77%), Postives = 90/195 (46.15%), Query Frame = 0 
Query:   77 PGSSPQVQVGSYAPLMRRIF---WVSAGQGWVVWIFSVSSAGDQNWMTSYDGSGYGIEDVNNNCDGTRSNDSACAAYEAFVATQIFATITCSVAVVIYTFAFFQPFEAQLGSTKVLGLAGGILMALATFFQMLAF-IFAAKRVQENVEEWGEGYFE--RGPTYGIGVATFVFGLIQATLIFL---SFWAAGDGPL 262
            P S+P  +  +  P  R++F   W       + W+F+V++A D  W+      GY +  +   C+ + S    C  Y+   A Q FA I  S  VV+   A F+P  A    T  LG A G ++ + +  Q+ AF I AA   + N +   + YF+   GPT G+ V  +VFGL   + I L         DGPL
Sbjct:   27 PPSTPASRARNDQPKQRKVFLVYWAVCFATAITWLFAVAAASDDAWLQF---EGYPLLKLGERCEFSAS---FCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPA----TGRLGAAAGTMLLVFSVLQLAAFSIMAASAGRLNRDN--DNYFQIKAGPTIGVAVIAWVFGLAGGSAILLLRPHATPGQDGPL 209
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1346.2562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPD0_ECTSI1.350e-4141.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWH1_ECTSI1.760e-830.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 7..39
e-value: 4.1E-11
score: 52.9
IPR001202WW domainPFAMPF00397WWcoord: 8..37
e-value: 5.2E-11
score: 42.4
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 12..37
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 6..39
score: 16.589
NoneNo IPR availableGENE3D2.20.70.10coord: 2..42
e-value: 1.8E-14
score: 55.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..257
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 258..363
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 177..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..212
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..176
NoneNo IPR availableTMHMMTMhelixcoord: 190..212
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 233..255
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 3..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1346contigF-serratus_M_contig1346:70283..86265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1346.2562.1mRNA_F-serratus_M_contig1346.2562.1Fucus serratus malemRNAF-serratus_M_contig1346 69574..86365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1346.2562.1 ID=prot_F-serratus_M_contig1346.2562.1|Name=mRNA_F-serratus_M_contig1346.2562.1|organism=Fucus serratus male|type=polypeptide|length=364bp
MTNGAGTLPQGWTTGQSKDGRTFFINHNSKTTTWEHPENAAPPPDYFEAT
TNLPAPASVYPVAGVAAFRPPQAVALPGSSPQVQVGSYAPLMRRIFWVSA
GQGWVVWIFSVSSAGDQNWMTSYDGSGYGIEDVNNNCDGTRSNDSACAAY
EAFVATQIFATITCSVAVVIYTFAFFQPFEAQLGSTKVLGLAGGILMALA
TFFQMLAFIFAAKRVQENVEEWGEGYFERGPTYGIGVATFVFGLIQATLI
FLSFWAAGDGPLLSLAQELTAPKEVNIPVSSPQIVASKPQGTQPVANMSQ
VPRPEASGGEGAIAANPPQLNNSNAVPPPYESPKLGPNPSQPTSTSEGPP
PAYHSADIESTTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf