prot_F-serratus_M_contig1340.2544.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1340.2544.1
Unique Nameprot_F-serratus_M_contig1340.2544.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length94
Homology
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BLAST of mRNA_F-serratus_M_contig1340.2544.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 8.220e-10
Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:    2 GTTTTVKEKALLEKILAEKQAAGIQRWLNFTLVGVGELWKCACHHDGGWVADGDYSMAPEEILRDKGGVDDGSSSPLKAMVALRREARQRTQA 94
            G+  T+  K+L +K  AEKQ AG   WLNFTLVG  +L   A   D G   DG        +  + GGV   SSSPLKAMVA+R EARQR +A
Sbjct:  147 GSKATLLRKSLSDKGWAEKQTAGFTNWLNFTLVGAEQLRHGA--GDDGEEEDGG-------VTAEIGGV---SSSPLKAMVAMRHEARQRVRA 227
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BLAST of mRNA_F-serratus_M_contig1340.2544.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 9.970e-9
Identity = 46/89 (51.69%), Postives = 53/89 (59.55%), Query Frame = 0 
Query:    6 TVKEKALLEKILAEKQAAGIQRWLNFTLVGVGELWKCACHHDGGWVADGDYSMAPEEILRDKGGVDDGSSSPLKAMVALRREARQRTQA 94
            T+  K+L +K  AEKQ AG   WLNFTLVG  +L   A   D G   DG  +    EI    GGV   SSSPLKAMVA+R EARQR +A
Sbjct:  264 TLLRKSLSDKGWAEKQTAGFTNWLNFTLVGAEQLRHGA--GDDGEEEDGGLTA---EI----GGV---SSSPLKAMVAMRHEARQRMRA 340
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1340.2544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRH5_9PHAE8.220e-1048.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLN9_ECTSI9.970e-951.69Similar to asp (Abnormal spindle)-like, microcepha... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1340contigF-serratus_M_contig1340:139065..153867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1340.2544.1mRNA_F-serratus_M_contig1340.2544.1Fucus serratus malemRNAF-serratus_M_contig1340 139047..153867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1340.2544.1 ID=prot_F-serratus_M_contig1340.2544.1|Name=mRNA_F-serratus_M_contig1340.2544.1|organism=Fucus serratus male|type=polypeptide|length=94bp
MGTTTTVKEKALLEKILAEKQAAGIQRWLNFTLVGVGELWKCACHHDGGW
VADGDYSMAPEEILRDKGGVDDGSSSPLKAMVALRREARQRTQA
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