prot_F-serratus_M_contig134.2534.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig134.2534.1
Unique Nameprot_F-serratus_M_contig134.2534.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length129
Homology
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BLAST of mRNA_F-serratus_M_contig134.2534.1 vs. uniprot
Match: D7G2H7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H7_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 1.040e-47
Identity = 100/127 (78.74%), Postives = 109/127 (85.83%), Query Frame = 0 
Query:    1 MAFKAFVLLMALCLVSMASGFVAPTGFARSVAIKQAVQMSXXXXXXXXXXXXXXXXXXX-VCAPLASYAAEQSSVLAQLPTELLADNGTATLAIVVGMFIPCSFLITLYFGTEQKKAGLIEGQNMPK 126
            MAFKAF +L+ALCLVS+ASGFVAPT  AR+VA+KQAVQMS        XXXXXXXXXX  VC+PLAS+AA+ SS LAQLPTELLADNGTATLAIVVGMFIPCSFLITLYFGTEQKK G+IEGQ M K
Sbjct:    1 MAFKAFAVLVALCLVSLASGFVAPTAVARNVAMKQAVQMSAKSSLPAAXXXXXXXXXXAAVCSPLASFAADPSSALAQLPTELLADNGTATLAIVVGMFIPCSFLITLYFGTEQKKKGVIEGQEMNK 127
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig134.2534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2H7_ECTSI1.040e-4778.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..109
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.832
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig134contigF-serratus_M_contig134:552653..560463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig134.2534.1mRNA_F-serratus_M_contig134.2534.1Fucus serratus malemRNAF-serratus_M_contig134 552653..560463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig134.2534.1 ID=prot_F-serratus_M_contig134.2534.1|Name=mRNA_F-serratus_M_contig134.2534.1|organism=Fucus serratus male|type=polypeptide|length=129bp
MAFKAFVLLMALCLVSMASGFVAPTGFARSVAIKQAVQMSAQSGLPTAVP
AAAAVAAASVCAPLASYAAEQSSVLAQLPTELLADNGTATLAIVVGMFIP
CSFLITLYFGTEQKKAGLIEGQNMPKKK*
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