prot_F-serratus_M_contig1337.2506.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1337.2506.1
Unique Nameprot_F-serratus_M_contig1337.2506.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length343
Homology
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: A0A6H5L0B7_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B7_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 9.180e-87
Identity = 171/285 (60.00%), Postives = 205/285 (71.93%), Query Frame = 0
Query:   58 DGGFGSMGPLRTGGVGLSGPASGSLHQGGVSFGPGGRQTDTTPATGGRTLGSSGGGKVGNHLMSYSQNVSMLNGLVQQLGTTRDTAELRGQCRCQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVNAIALDLRSQTERRMREVDTERRRLEXXXSERARAAFSGVGGERQQSGLAEVQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKASDYQTTCSIS 342
            +GGFGS GPLRTGG+G                                     GGGKVG++L+ YSQNV++L+ +VQQLGT RDT ELRGQCRCQ++VIDELREKIQ ++R+ QQQAEGASR +AARL+AM+SKLTKDFNRVNAIALDL +Q ERRMREVD +R    XXX                  G+ +VQQRR   E+++ +EEA+NTAIIQETEEEL QINKSLYKVNEIYRDLA++V+QQQEAV+ IETNTEGAH RAQEGL+QVQKA+DYQ +C +S
Sbjct:   68 EGGFGSAGPLRTGGIGAGXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXGGGKVGDYLVIYSQNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIDELREKIQGQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXX-XGMRQVQQRR---ERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 346          
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: D7FPU1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU1_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 1.590e-77
Identity = 145/223 (65.02%), Postives = 172/223 (77.13%), Query Frame = 0
Query:  120 MSYSQNVSMLNGLVQQLGTTRDTAELRGQCRCQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVNAIALDLRSQTERRMREVDTERRRLEXXXSERARAAFSGVGGERQQSGLAEVQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKASDYQTTCSIS 342
            M YSQNV++L+ +VQQLGT RDT ELRGQCRCQ++VI ELREKIQ ++R+ QQQAEGASR +AARL+AM+SKLTKDFNRVNAIALDL +Q ERRMREVD +R    XXX                              E+++ +EEA+NTAIIQETEEEL QINKSLYKVNEIYRDLA++V+QQQEAV+ IETNTEGAH RAQEGL+QVQKA+DYQ +C +S
Sbjct:    1 MIYSQNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 219          
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: A0A835ZJ40_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ40_9STRA)

HSP 1 Score: 114 bits (285), Expect = 5.270e-27
Identity = 79/162 (48.77%), Postives = 106/162 (65.43%), Query Frame = 0
Query:  182 AARLTAMSSKLTKDFNRVNAIALDLRSQTERRMREVDTERRRLEXXXSERARAA-FSGVGGERQQSGLAEVQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKASDYQTTCSIS 342
            AARL+    +  +D+NRV+ +A DL  +  RR  ++D  RRR     +E A AA   GV      +G   ++  +QQ+ Q +  EEA+N AII+ETE EL  INKSL+ V+EI++DLAS+V QQQE V+ IE  TE AH RAQ+GL QVQ+AS YQ +CSIS
Sbjct:   20 AARLSVCCVR-EQDYNRVSRLAKDLEVEAARRAEDLD--RRRRGTAAAEAAVAARIFGVEDNADSAGGGALRGPQQQQLQAQMAEEAINQAIIEETEAELGAINKSLHAVHEIFKDLASMVSQQQEQVEHIEEQTEAAHQRAQQGLAQVQQASHYQPSCSIS 178          
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: F0Y8W0_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8W0_AURAN)

HSP 1 Score: 95.5 bits (236), Expect = 7.310e-19
Identity = 87/259 (33.59%), Postives = 133/259 (51.35%), Query Frame = 0
Query:  115 VGNHLMSYSQNVSMLNGLVQQL-GTTRDTAELRGQCRCQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVNAI---ALDLRSQTERRMREVD----------------TERRRLEXXXSERARAAFSG---VGGERQQSGLAE--------VQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKASDYQTTCSIS 342
            +  +L  +S NVS+L  L   L G  R + EL  Q   Q +V++EL   ++     L ++ + A R E  R  A  +KL KDF+RV      A+D    + R                       + R L    ++R  ++  G   VG  R Q G ++        + + R Q  Q+  +EEA+N AI++E EEE+ +IN++++KVNEI+RDLA+LVD+QQ  VD I    E +H  A++GL QVQKA+  Q +C +S
Sbjct:   44 IAENLRQFSHNVSLLERLADHLAGAPRASEELLRQIAAQQDVVEELARVLRKAFGDLVRRVDAAPRAEQGRARAAHAKLRKDFDRVQGTVGRAVDKIKSSRRAALGAXXXXXXXXXXXXXXXXAVDHRDLRVAVNDRPSSSSGGPHRVG--RAQFGPSDAPGDLDVMIGEERVQL-QVAMQEEAINDAILREREEEIREINQNVHKVNEIFRDLATLVDKQQGEVDQIGELVEKSHAHAEKGLDQVQKAAKLQPSCVVS 299          
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: A0A7S3JXJ1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXJ1_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.270e-18
Identity = 89/262 (33.97%), Postives = 132/262 (50.38%), Query Frame = 0
Query:  114 KVGNHLMSYSQNVSMLNGLVQQLGTTRDTA-ELRGQCRCQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVNAIALDLRSQTER--RMREVDTERRRLEXXXSER-----------------ARAAFSGVGGE----RQQSGLAEV---------QQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKASDYQTTCSIS 342
            ++ + L  + QN+ +L+ L   +GT  D   E   Q   Q +V+ EL   ++  +  L ++ E   R+E  R  A  +KL KDF RV +   DLR   ++    R +     R E   S                   +R+A + VG      R Q G ++           QR Q   Q+  +EEA+N AI++E EEE+ +IN+S++KVNEI+RDLA +VD+QQ  VD I    E +H  A++GL QVQKA+  Q TC IS
Sbjct:   58 QISDWLRQFQQNLLILDRLGDTVGTDPDPGDEFLRQVAAQQDVVSELASTVRRALNDLPRRIEALPRIEQGRPKAAMAKLRKDFERVGS---DLRRVLDKIKNARRLALTNARAEKGGSLSGQASTASSQQMNGSNLYSRSANAAVGAPHRVGRAQFGPSDAPGDLDVVIGNQRVQL--QVAMQEEAINDAILREREEEIREINQSVHKVNEIFRDLALIVDKQQTEVDQIGDLVEKSHNHAEKGLDQVQKAAKLQPTCLIS 314          
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: B8LCN4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCN4_THAPS)

HSP 1 Score: 93.2 bits (230), Expect = 1.770e-17
Identity = 78/233 (33.48%), Postives = 124/233 (53.22%), Query Frame = 0
Query:  118 HLMSYSQNVSMLNGLVQQLGTTRDTAELRGQCRCQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVNA----IALDL---RSQTERRMREVDTERRRLEXXXSERARAAFSGVGGERQQSGLAEVQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKASD-YQTTCSIS 342
            H M   +NV++L  + + +GT  D + L+ Q   Q++VI +L  +I+ +++  + +     R EAA+      KL++D+  V      + LD+   RS  E R RE+     R+EXXX         G G     S   EV +R     Q++ +E+ +N  I++E E E+  I+K +++VNEIY+DLA LVD QQE VD IET  E        GL  ++KA++  Q+ C +S
Sbjct:  197 HTMDSQRNVALLEKMARSVGTKNDNSVLQTQYNLQLDVIRQLGTRIEKQLQSQESRLSTLPRTEAAQSRTTHVKLSRDYRLVEQQFKNVQLDVKKKRSLAEARQREI-----RIEXXXXXXXXVNGGGEG-----SAGDEVMRR-----QMQIQEDRINEEIMREREAEIRNIHKGMHQVNEIYKDLAHLVDNQQEGVDQIETQMENTKENTASGLKHIEKANESQQSQCVVS 414          
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: A0A7S4JYM9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JYM9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.890e-16
Identity = 72/232 (31.03%), Postives = 120/232 (51.72%), Query Frame = 0
Query:  114 KVGNHLMSYSQNVSMLNGLVQQLGTTRDTAELRGQCRCQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVNAIALDLRSQTERRMREVDTERRRLEXXXSERARAAFSGVGGERQQSGLAEVQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKAS---DYQTTCSIS 342
            +V + ++ + +N+ +L  +V Q GT  D   L+ Q   Q++V+ +L E+I+ ++R  +++    SR E  +  +  +KLT+D+ RV     +++ +  RR R +        XXX         G G E  Q+ L E               + +   I++E EEE+  INK ++ VNEIY+DLA +V +QQE +D +ET+ E A    + GL QV+KA+   D    C IS
Sbjct:   53 QVSDGIVQFRRNIGILEKIVSQFGTKADGPMLQKQYATQLDVVRQLGERIEGQLRRAEEEMRTMSRTEREKSRSTHAKLTRDYRRVEQAFKNVQLEV-RRKRGLAEAXXXXXXXXXXXXXXXGEGAGDELLQAQLQE---------------DRLAEEIMREREEEIRNINKGMHTVNEIYKDLAHVVGRQQEQIDQVETHMEDAKDNTEAGLKQVEKANEKADSPYQCVIS 268          
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: A0A7R9W8L2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8L2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.110e-16
Identity = 73/232 (31.47%), Postives = 119/232 (51.29%), Query Frame = 0
Query:  114 KVGNHLMSYSQNVSMLNGLVQQLGTTRDTAELRGQCRCQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVNAIALDLRSQTERRMREVDTERRRLEXXXSERARAAFSGVGGERQQSGLAEVQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKAS---DYQTTCSIS 342
            +V + ++ + +N+ +L  +V Q GT  D   L+ Q   Q++V+ +L E+I+ ++R  +++    SR E  +  A  +KLT+D+ RV     +++ +  RR R +        XXX         G G E  ++ L E               + +   I++E EEE+  INK ++ VNEIY+DLA +V  QQE +D +E N E A    +EGL QV+KA+   D    C IS
Sbjct:  110 QVSDGIVQFRKNIGILEKIVAQFGTKGDGPMLQKQYATQLDVVRQLGERIEGQLRRAEEEMRTMSRTEREKSRATHAKLTRDYRRVAQAFKNVQLEV-RRKRGLAEAXXXXXXXXXXXXXXXGEGAGDELLRAQLQE---------------DRLAEEIMREREEEIRNINKGMHTVNEIYKDLAHIVGNQQEQIDQVEANMEDAKVTTEEGLKQVEKANEKADSPYQCLIS 325          
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: A0A8J2T2B1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2B1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.130e-14
Identity = 80/240 (33.33%), Postives = 117/240 (48.75%), Query Frame = 0
Query:  114 KVGNHLMSYSQNVSMLNGL---VQQLGTTRDTAELRGQCRCQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVNAIALDLRSQTERRMREVDTERRRLEXXXSERARAAFSGVGGERQQS---------GLAEVQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKASDYQTTCSI 341
            +  N L    QNV++L  L   V   G     AELR Q   Q  V+++L    +  +  L + AE +    A R  A  ++L  DF RV     D   Q  RR+  V              AR    G    R +S          L   +QR Q   Q+  ++E ++ A+++E E EL  IN  ++KVNEI+RDLA+LVD+QQ+ VD I    E +H  A++GL QVQKA+  Q++C++
Sbjct:   19 RAANALRQLRQNVALLERLCDMVDSAGAAGADAELRQQVAVQRGVVEDLTRATRRHLTELLRDAENSPPATAPRRRAAHARLRTDFERVE----DRIRQATRRLGRVAA------APPVPPARPPPVGAAAGRDRSPPRPPPGDVDLLVGEQRVQL--QVAMQDEDIDEALVREREAELRNINADVHKVNEIFRDLATLVDKQQDDVDKIGELVERSHAHAEKGLDQVQKAAANQSSCAL 246          
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Match: UPI000719B57E (syntaxin-12-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719B57E)

HSP 1 Score: 81.3 bits (199), Expect = 7.050e-14
Identity = 73/227 (32.16%), Postives = 117/227 (51.54%), Query Frame = 0
Query:  114 KVGNHLMSYSQNVSMLNGLVQQLGTTRDTAELR----GQCRCQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVNAIALDLRSQTERRMREVDTERRRLEXXXSERARAAFSGVGGERQQSGLAEVQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASLVDQQQEAVDMIETNTEGAHTRAQEGLIQVQKASDYQ 336
            +V  H+ + S N S L   ++Q+GT++D+  LR    G  +    +I +  E ++  + M+ +Q++ + RL+  RL    ++L     R + I    + +T  +MRE    +R L    +   +    G         L E Q+RRQQ  Q++ E      A+ +E +E + QI   +  VNEI+R+LASLV +Q E VD IE N E A T  +EG  Q+Q+AS YQ
Sbjct:   37 EVSTHIFTISNNASGLERALKQVGTSQDSLRLRQKIHGTQQTTNAIITQCHELLKN-LAMVARQSDKSKRLQVERLR---NELKDTIKRYSLI----QKKTAEKMRETMPTKRPLLAPPASEEQLIGWGADXXXXXXRLVEDQRRRQQL-QIQKEHVDFEIALYEERDERIRQIEADILDVNEIFRELASLVHEQGEVVDTIEANVEKAATEVEEGATQLQRASKYQ 254          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1337.2506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0B7_9PHAE9.180e-8760.00t-SNARE coiled-coil homology domain-containing pro... [more]
D7FPU1_ECTSI1.590e-7765.02Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835ZJ40_9STRA5.270e-2748.77t-SNARE coiled-coil homology domain-containing pro... [more]
F0Y8W0_AURAN7.310e-1933.59t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3JXJ1_9STRA3.270e-1833.97Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
B8LCN4_THAPS1.770e-1733.48Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S4JYM9_9STRA1.890e-1631.03Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7R9W8L2_9STRA3.110e-1631.47Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8J2T2B1_9STRA2.130e-1433.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI000719B57E7.050e-1432.16syntaxin-12-like n=1 Tax=Priapulus caudatus TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 248..268
NoneNo IPR availableCOILSCoilCoilcoord: 153..180
NoneNo IPR availableCOILSCoilCoilcoord: 207..227
NoneNo IPR availableGENE3D1.20.5.110coord: 275..340
e-value: 4.9E-15
score: 57.1
NoneNo IPR availableGENE3D1.20.58.70coord: 113..202
e-value: 1.8E-8
score: 36.1
NoneNo IPR availablePANTHERPTHR19957:SF38LD23667Pcoord: 117..337
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 117..337
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 265..332
e-value: 8.0E-7
score: 38.7
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 270..332
score: 15.46
IPR006011Syntaxin, N-terminal domainPFAMPF14523Syntaxin_2coord: 117..199
e-value: 9.7E-10
score: 38.7
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 114..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1337contigF-serratus_M_contig1337:198948..213818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1337.2506.1mRNA_F-serratus_M_contig1337.2506.1Fucus serratus malemRNAF-serratus_M_contig1337 198820..214889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1337.2506.1 ID=prot_F-serratus_M_contig1337.2506.1|Name=mRNA_F-serratus_M_contig1337.2506.1|organism=Fucus serratus male|type=polypeptide|length=343bp
MSFQDVRPGQGRRQQTMASSAGSHYSYNGGRSTNTAGASRATASSSRTGV
AKTGSRSDGGFGSMGPLRTGGVGLSGPASGSLHQGGVSFGPGGRQTDTTP
ATGGRTLGSSGGGKVGNHLMSYSQNVSMLNGLVQQLGTTRDTAELRGQCR
CQVEVIDELREKIQTEIRMLQQQAEGASRLEAARLTAMSSKLTKDFNRVN
AIALDLRSQTERRMREVDTERRRLEEEDSERARAAFSGVGGERQQSGLAE
VQQRRQQREQLRAEEEAVNTAIIQETEEELHQINKSLYKVNEIYRDLASL
VDQQQEAVDMIETNTEGAHTRAQEGLIQVQKASDYQTTCSIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR006011Syntaxin_N
IPR010989SNARE