prot_F-serratus_M_contig1337.2500.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1337.2500.1
Unique Nameprot_F-serratus_M_contig1337.2500.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length194
Homology
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BLAST of mRNA_F-serratus_M_contig1337.2500.1 vs. uniprot
Match: A0A6H5LGX5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGX5_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 5.700e-65
Identity = 108/200 (54.00%), Postives = 134/200 (67.00%), Query Frame = 0 
Query:    1 MHPEKHPEVVAGRLSARQIKDDFCDFFGGREGGSPRHTGKATTIPSGVTLEGFREYYRDVGVCEPYDAVFIPTVEVLWGVREPRSQGDKRSHLAQTLRTKLLQHSRTAETPAEIFKKTLQYYSQP--GRAGLHHGG------VIGASGVERALNNFGLYPDKNDIQDVFSALGSSTAELHPVDSVVAILCPPEAPMTTMF 192
            M+ + HPEV AGR+  +++KDDFC+FF  R G   R +G A      V+LEGFREYYRDVGVCEPYD VFIP +E LWGVREP     +RS L + L  KL QHSR AET  E+ +KTL+YYS+   G  G  H G      V+G SGVER+LN+FGLYPDK ++QD+F+ALGS   +   VD V+  LCPPE  +  MF
Sbjct:  161 MNADGHPEVAAGRIGPQEVKDDFCEFFIDRAG--ERGSGGAAAGAPTVSLEGFREYYRDVGVCEPYDTVFIPMIEALWGVREPHPGDIRRSELTKLLLPKLKQHSRGAETAGEVLRKTLRYYSEDDKGERGAKHSGXXXXXXVVGPSGVERSLNSFGLYPDKREVQDIFAALGSPKGQPQDVDKVLVYLCPPEPVLAPMF 358
[Close]
BLAST of mRNA_F-serratus_M_contig1337.2500.1 vs. uniprot
Match: D7FPT6_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT6_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 1.470e-49
Identity = 91/171 (53.22%), Postives = 115/171 (67.25%), Query Frame = 0 
Query:    1 MHPEKHPEVVAGRLSARQIKDDFCDFFGGREGGSPRHTGKATTIPSGVTLEGFREYYRDVGVCEPYDAVFIPTVEVLWGVREPRSQGDKRSHLAQTLRTKLLQHSRTAETPAEIFKKTLQYYSQP--GRAGLHHGG-----------VIGASGVERALNNFGLYPDKNDIQ 158
            M+ + HPEV AGR+  +++KDDFC+FF  R G   R +G A      V+LEGFREYYRDVGVCEPYD VF+P +E LWGVREP    ++RS L + L  KL QHSR AET  E+ +KTL+YYS+   G  G  HGG           V+G SGVER+LN+FGLYPDK +++
Sbjct:  117 MNADGHPEVAAGRIGPQEVKDDFCEFFIDRAG--ERGSGGAAAGALAVSLEGFREYYRDVGVCEPYDTVFVPMIEALWGVREPHPGDNRRSELTKLLLPKLKQHSRGAETTGEVLRKTLRYYSEDDNGERGARHGGXXXXXXXXXXXVVGPSGVERSLNSFGLYPDKREVE 285
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1337.2500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LGX5_9PHAE5.700e-6554.00EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FPT6_ECTSI1.470e-4953.22Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..81
e-value: 9.8E-8
score: 34.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1337contigF-serratus_M_contig1337:8119..27149 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1337.2500.1mRNA_F-serratus_M_contig1337.2500.1Fucus serratus malemRNAF-serratus_M_contig1337 7878..27229 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1337.2500.1 ID=prot_F-serratus_M_contig1337.2500.1|Name=mRNA_F-serratus_M_contig1337.2500.1|organism=Fucus serratus male|type=polypeptide|length=194bp
MHPEKHPEVVAGRLSARQIKDDFCDFFGGREGGSPRHTGKATTIPSGVTL
EGFREYYRDVGVCEPYDAVFIPTVEVLWGVREPRSQGDKRSHLAQTLRTK
LLQHSRTAETPAEIFKKTLQYYSQPGRAGLHHGGVIGASGVERALNNFGL
YPDKNDIQDVFSALGSSTAELHPVDSVVAILCPPEAPMTTMFS*
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