prot_F-serratus_M_contig1327.2429.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1327.2429.1
Unique Nameprot_F-serratus_M_contig1327.2429.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length280
Homology
BLAST of mRNA_F-serratus_M_contig1327.2429.1 vs. uniprot
Match: D8LLZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ3_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 8.730e-65
Identity = 115/221 (52.04%), Postives = 142/221 (64.25%), Query Frame = 0
Query:   58 IRRREFLRTASVGAAAGVLTWTGYGFPNHAEADVSRPAARGLAEASIQLLGTDKKPIEVSVLYPKQWTVTKTPGKQISIQDYKYTDRAFSLSTPFPTGKKSLGDLPVSFYTDVLFDLNGPYGNFGRVEDFKVIKSQTVDKGKRVYRYVDLKFAAPTQTVMQVQRRVCIASTIVGEDVVIFTASVLASRWDKISAVVAEMVESYRAEEPQKTPDPSSFSFNR 278
            + RR  L  ASV A AG +  TG      A A  +RP+AR LAE SI+L G+ ++PI VSVLYPKQWTVTKT GK I+IQD KYTDRAFSL+ P P+G KS+GD+P+SF+TD LF L+GPYG FG+V+DFKVI +++  KGKR YRYVDLKF+APTQ ++Q                                       ES+RA+  QKTPDPSSF+FNR
Sbjct:   43 VSRRALLEKASVAAVAGAVALTGVA--GEASAGTARPSARNLAETSIELNGSGQQPIAVSVLYPKQWTVTKTAGKSINIQDMKYTDRAFSLAMPLPSGTKSVGDIPLSFFTDALFSLDGPYGTFGKVDDFKVIGAKSEAKGKRDYRYVDLKFSAPTQGLLQ---------------------------------------ESFRADVAQKTPDPSSFAFNR 222          
BLAST of mRNA_F-serratus_M_contig1327.2429.1 vs. uniprot
Match: A0A7S0M0T2_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M0T2_9CRYP)

HSP 1 Score: 107 bits (266), Expect = 1.540e-23
Identity = 57/165 (34.55%), Postives = 94/165 (56.97%), Query Frame = 0
Query:  103 SIQLLGTDKKPIEVSVLYPKQWTVTKTPGKQISIQDYKYTDRAFSL-----STPFPTGKKSLGDLPVSFYTDVLFDLNGPYGNFGRVEDFKVIKSQTVDKGKRVYRYVDLKFAAPTQTVMQVQRRVCIASTIVGEDVVIFTASVLASRWDKISAVVAEMVESYRA 262
            +++L+  + KP+ +S + PK W ++   G  I+IQDY   D A+ +       P  T      +L  S+    +FD+NG YG FG+++D +V+KS    +G  +YRYVD KF++ +    Q++R  C+ +  V  D +I  AS  A+RW K+ A +A+M+ SY A
Sbjct:  111 AVELVNGNGKPVLISFVRPKDWKISTNTG--IAIQDYITADSAYVIVCPASEKPAATDAADASELDPSYLLSKVFDINGRYGAFGKIDDVRVLKSDARREGGGIYRYVDFKFSSLSPGGRQIERLGCLKAARVDGDAIILVASARATRWKKVGATIADMLASYAA 273          
BLAST of mRNA_F-serratus_M_contig1327.2429.1 vs. uniprot
Match: A0A8J5XFB9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XFB9_DIALT)

HSP 1 Score: 99.0 bits (245), Expect = 1.150e-20
Identity = 53/168 (31.55%), Postives = 101/168 (60.12%), Query Frame = 0
Query:   95 AARGLAEASIQLLGTDKKPIEVSVLYPKQWTVTKTPGKQISIQDYKYTDRAFSLSTPFPTGKKSLGDLPVSFYTDVLFDLNGPYGNFGRVEDFKVIKSQTVDKGKRVYRYVDLKFAAPTQTVMQVQRRVCIASTIVGEDVVIFTASVLASRWDKISAVVAEMVESYRA 262
            A+ G+    ++  G     + V+  +PK WT  +  G+ + +++ + +D AF L+   P G +S+  LP +F+T  LF  +G +G +G V+DF+V+ S+ V++    Y  +D++F+A +     V+RR+ +++ +VG+ V +  AS  A+R+  +SA + ++VESYRA
Sbjct:  117 ASPGIFSDELRGAGDPSAIVGVTFTFPKAWTPAR--GQNVDVRNIRTSDGAFLLALRAPDGAQSVRALPDAFFTRALFAPDGKFGQYGAVDDFRVLSSRVVERDGVPYATLDVRFSALSFNYNLVERRLLLSAVVVGDSVYMLAASAFATRFKTVSAQLRDVVESYRA 282          
BLAST of mRNA_F-serratus_M_contig1327.2429.1 vs. uniprot
Match: A0A7S3TCW7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TCW7_EMIHU)

HSP 1 Score: 83.6 bits (205), Expect = 3.500e-15
Identity = 53/153 (34.64%), Postives = 86/153 (56.21%), Query Frame = 0
Query:  115 EVSVLYPKQWTVTKTPGKQISIQDYKYTDRAFSLSTPFPTGKKSLGDLPVSFYTDVLFDLNGPYGNFGRVEDFKVIK----SQTVDKG-KRVYRYVDLKFAAPTQTVMQVQRRVCIASTIVGEDVVIFTASVLASRWDKISAVVAEMVESYRA 262
            EV+  +P  WT+   P   + ++D + +D AF L    P G+ +   LP +F+ D+LFD  G YG +G+VED KV+     + T+  G K+ YR + LKFA  +     V+RR  +++T VG  V +  +  LA+R+  +   + E+ ES+RA
Sbjct:  109 EVAFAFPAAWTLAGGPN--LDVRDVRQSDSAFLLVGALPAGQ-AFESLPDNFFLDLLFDPAGKYGQYGQVEDRKVLSCTLTALTLPNGRKQQYRRMALKFAPLSYNANTVERRALLSATAVGGSVFVMVSGSLATRYKAVKEDLLEVQESFRA 258          
BLAST of mRNA_F-serratus_M_contig1327.2429.1 vs. uniprot
Match: A0A7S2C8B0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C8B0_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 9.050e-15
Identity = 52/144 (36.11%), Postives = 79/144 (54.86%), Query Frame = 0
Query:  123 QWTVTKTPGKQISIQDYKYTDRAFSLSTPFPTGKKSLGDLPVSFYTDVLFDLNGPYGNFGRVEDFKVIKSQTVD-----KGKRVYRYVDLKFAAPTQTVMQVQRRVCIASTIVGEDVVIFTASVLASRWDKISAVVAEMVESYR 261
            QWT+   P   + +++ + +D AF L  P P G+   G LP  ++ DV+FD  G YG +G+V+D KV+KS+         G + YR + LKFA  +     VQRR  I++T VG  V I  A  LA+R+  +   +  + ES+R
Sbjct:    2 QWTLATGPN--LDVRNVRESDSAFVLVAPLPPGQTFAG-LPNDWFLDVIFDPMGKYGQYGQVDDRKVVKSELESITLPSGGNQQYRRMVLKFAPLSYNQNTVQRRALISATSVGGSVFICMAGCLATRYKALQPDLMNVQESFR 142          
BLAST of mRNA_F-serratus_M_contig1327.2429.1 vs. uniprot
Match: A0A0M0K5K4_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K5K4_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 8.300e-6
Identity = 28/72 (38.89%), Postives = 45/72 (62.50%), Query Frame = 0
Query:  120 YPKQWTVTKTPGKQISIQDYKYTDRAFSLSTPFPTGKKSLGDLPVSFYTDVLFDLNGPYGNFGRVEDFKVIK 191
            YP++WT+   P   + +++ K +D AF L+ P P GK ++  L   F+ +V+FD  G YG +G V+D KVI+
Sbjct:   41 YPEEWTLAGGPN--LDVRNVKESDSAFVLAAPLPLGK-TIEILDEEFFLNVIFDPQGKYGQYGAVDDRKVIE 109          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1327.2429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LLZ3_ECTSI8.730e-6552.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0M0T2_9CRYP1.540e-2334.55Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A8J5XFB9_DIALT1.150e-2031.55Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S3TCW7_EMIHU3.500e-1534.64Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S2C8B0_9EUKA9.050e-1536.11Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A0M0K5K4_9EUKA8.300e-638.89Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019546Twin-arginine translocation pathway, signal sequence, bacterial/archaealTIGRFAMTIGR01409TIGR01409coord: 60..85
e-value: 0.0016
score: 16.8
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 112..262
e-value: 2.8E-5
score: 25.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..279
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.469

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1327contigF-serratus_M_contig1327:109755..126269 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1327.2429.1mRNA_F-serratus_M_contig1327.2429.1Fucus serratus malemRNAF-serratus_M_contig1327 109225..126366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1327.2429.1 ID=prot_F-serratus_M_contig1327.2429.1|Name=mRNA_F-serratus_M_contig1327.2429.1|organism=Fucus serratus male|type=polypeptide|length=280bp
MRLYTFLVAFCATNCNAFTVRSDLSRSSSQRRRAAAKHDVEPGVSEAAVE
SNGRDGIIRRREFLRTASVGAAAGVLTWTGYGFPNHAEADVSRPAARGLA
EASIQLLGTDKKPIEVSVLYPKQWTVTKTPGKQISIQDYKYTDRAFSLST
PFPTGKKSLGDLPVSFYTDVLFDLNGPYGNFGRVEDFKVIKSQTVDKGKR
VYRYVDLKFAAPTQTVMQVQRRVCIASTIVGEDVVIFTASVLASRWDKIS
AVVAEMVESYRAEEPQKTPDPSSFSFNRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019546TAT_signal_bac_arc
IPR016123Mog1/PsbP_a/b/a-sand