prot_F-serratus_M_contig1327.2426.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1327.2426.1
Unique Nameprot_F-serratus_M_contig1327.2426.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1483
Homology
BLAST of mRNA_F-serratus_M_contig1327.2426.1 vs. uniprot
Match: D8LLZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLZ1_ECTSI)

HSP 1 Score: 741 bits (1912), Expect = 5.270e-236
Identity = 566/1551 (36.49%), Postives = 755/1551 (48.68%), Query Frame = 0
Query:   36 NRP-PDRPSTQ--TARGPRTENLASRGRHSSETKDGNCIGKERLELTSLQQKVAERDLAKNQGQEQFKRQDAEVAKLEYYIRQLVDERGGIDENIMKSIVSDLEKSALVRRTQKQFADLKDELIRKEEQLSSLKAMLNSNHVLRTVEANDSLVDKSEKLIAQSNQHATRD--GNSEVLRSLHENTRPERAE--------LEKLWAQNSAMRAEIARLRSELHAVHSREKKSNNHSGEGGDSRSFSSASEIERTGSCRRSRDHASNGEVVQRTFNPKSRHESNNGPMFYEGQTVECRTVGSGTWKPAVVDSVHLLSDTAGSSR------------DRGS-KAYAYTVWFDNG--GSEDNVPEVRIRSARGYELDDGGSPGAAHQ------SGGTIIRMRAFRPGEIVFARDSGS------KGKWSRAEVVRKDTKGMYCVLFDG-KTEEHVLHPTMLRSTNDLKQNTAGGHHIDGGDVIGIDEDSRGEYTKSVMASPAEKAELRYAEQRETRLEAARSALPEPVKVGHEVLARYLGREAWGAGTVVGQGKDELHLSVDFDSGNFTENLPFIFTTPRLTGNLSSDQTHVFPGDAVLAQK---DDTSSSD--DWYPARFKRYENDGY--CSLVFVGEGAITSIRAERAQLLHGKTMNGGLVEIPGVPPPP----------TKPVRAKKHREGDLVLACIPKIKAWTPALVTGSKGRGRYSVEWADGEKSDSLLFMFMATLGYCGKGDRSTTVAGRHPSSRDRHGGSSSVRHNDGALEGDNVVEGAPNVLNPQSRVEGDVDDGTSKSAKTYVRLRQPQLKVGEPVLAKSLHDN-VWAPGSIKKIIGDGRYDVLFEDGSSAEGLSFIYIRPLDLMALS--DNGG-----------DSPEMACPANRDEHKVGDTVYVLKRGQSPESTPLNMRNRELWRAGVIAGVSNDRYTVVYDGEEGRPQESRIPAGRIRPRQRIRQKAAEKGDAVLALSKKPGRGWVMGTVAGRTGNGLYKIEFSDGSEEDGVRFANLRHVESNDGEDDKQNKTDKPVMRAIRQRRFYAGELALARHPESRKWSMAKVLEARPDGRYDLKLFGDGDPVVRGLSFQSLRHIDRAQIPANNPHLAGCETRGDGDESQPLQNGACIGDRTLDRSTSAKTEEDQPTNHRDVNDKKGDTQKSSSDMG----------------------------DSVP-----------ALGTRAGLNAGSDVYVLRRGKCADTEVEDTSAWRTGKIVSIRGNGSLAVEYDEPGRPKEDRVAVNRVRQRYVVADRCV-----------------------------DARSGDNSAHSHRHE-RFSEGDVVVAHTQE--SDGVSLVEVEANLGLSAYRVSFLDGSGTTEVASHQLRYKIPRFCFRGLHVSKQHSREIIIFRENVVKMRKLRLGELVLAQRDCA----GGKARSWFAATVLESEGRGIYSLLFEGDEDPTRIHFARIRPLKMGDEGGETTERAGLESLVLYVSEVSFNLSTAASAARRTLPYLLLATGERGEPWDAPWL 1439
            NRP P RPST   T   PR    A+R R S +  D   +GK RLE+ +L+ K++E DLA                                   +++SIV D+EKS+ ++   +Q ADLK +L  KE+Q+++L+      + L+  E  ++L  + E+LIA+SN        G +    S   + + + A                            +EL  V  R        G+ G  R   S S+         +RD+   G   Q        H  ++G  FYEGQ VECR  GS +W PA VDSV L  +  G                RGS + Y Y V+FD    G  ++VPE RIR+A      DG  PG           G T+IR R F  G++V  RD G         KW+  EV+R++  G Y VL  G + E    HPTMLR+ +  K +   G  +   D  G  +      TK+   SPAE+AE+RYAE+RE  LE AR  LP P+ VG EV+A+  G   W +G VV    D L   V+FDSG+  +NLP IF  PR  G+L+        GDAVLAQK    DT S D  DW+ ARF+ Y+ D    C + F GE A + ++A R + L+     G                      TKPVRAKKHREGD+VLACIP +K WTPA++TG KG GRYSVEWAD  +   LLFM +A++   G   +     G   SS D     S+  H+       +   G  +  + + R      + ++      VRLRQ  L VGEPVLAK   D   W+PGS+ +  G GRYD+ F DG++AE LSF+++R L     S  D GG           D+ EM     RD   VGD+VYVLKRG S E T  +M NR+LWR   +  V++ RYTV Y+GEEG+P+ESR+ A R+R R  IRQKA + GDAVLALSK PGRGWVMG V  R  +G Y I F+DG+E D +RF NLR V  +   ++K +  DKP  RAIRQRRF  GELAL +H E+RKW + KVLEA P GRYDL+   +G P   G+ FQ +RH+D A    ++    G          +  ++   +G+R    S +   E     N  D +   G   +  S+ G                            D  P           A      L  GSDVYVLRRGK  D +++D ++WR+GK+V +R NG+ AVEYDE G PKEDR+A NR+R+R    D+                               D   GD+    HR + +F  GD+  A T+       + V V+A LG   YRV F DGSGT E+ S +L +  P       H SK  +R          K R L  G+ V+A+R  +    G   R W AA V++      YS+LF GD +P R+HF  ++PL   ++      R     L L V+E SF+L  AASAAR T P L+LATGER    DA WL
Sbjct:   37 NRPAPVRPSTHRATKSTPRAAAEAAR-RLSVDPVDERAMGKVRLEVEALRDKLSEADLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCVLESIVKDIEKSSRMKHAMEQVADLKADLSLKEKQVAALRKSQAVEYTLKLAEEKEALQVRVERLIAESNSKHDSGIRGRTTSFNSASSSQKEQSAASXXXXXXXXXXXXXXXXXXXXXXXXXXAELELVEMR--------GDSGSGREHGSRSQ---------NRDNMDRGRARQ--------HCHSDGARFYEGQAVECRKQGSDSWLPATVDSVRLTIEPLGGXXXXXXXXXXXXXDSRGSHRTYMYGVYFDGEETGRREDVPEFRIRAAAS---GDGNGPGLGSSRVVRDCDGETVIRSRVFGAGDLVLVRDGGGGRTNQDNKKWTLGEVIRRNDNGTYRVLVSGGQAEGKDFHPTMLRAQDGPKNSFDSGCDVH--DQPGASQ------TKTKATSPAEEAEIRYAERREELLELARGDLPAPLHVGQEVIAKSGGSTVWSSGVVVATDSDNLRCRVEFDSGDVEDNLPCIFVRPRRGGDLAPGGD-ARTGDAVLAQKTRKQDTRSGDRGDWFAARFRSYDEDDADSCYVTFDGERASSRLQATRVRFLYPSARGGXXXXXXXXXXXXXXXXXXXXXXTKPVRAKKHREGDIVLACIPTVKKWTPAVITGVKGHGRYSVEWADFVREKPLLFMHIASMQ--GPSRKRAISVGHKKSSDD-----SADSHHATTRAPASGASGGGDTGSDERRSRVLSAESSAGGITPSVRLRQRALNVGEPVLAKKAPDQGFWSPGSVTRADGGGRYDIRFTDGTTAEDLSFLFVRGLSAEQSSGDDRGGEVDTRSGRITSDTSEMHPSGERDP-VVGDSVYVLKRGHSVEITSQDMHNRDLWRVATVTAVASGRYTVQYNGEEGKPKESRVVAERLRVRNVIRQKAVQMGDAVLALSKTPGRGWVMGAVTARGSDGKYTISFTDGTESDQIRFVNLRRVVGHAEGEEKDDHNDKPSPRAIRQRRFKKGELALTKHSETRKWVIVKVLEALPSGRYDLQFLEEGSPNALGVPFQHIRHLDLACFAGDSQGATGNGXXXXXXXKRSPRDDMAVGERIPTESHTMSDEGWDGNNGHDYHAHSGHRSRGGSEEGYHQEKRVEKPRQQREASAGGGSTDYDERDETPRNRREGDGNRGASSETRPLTIGSDVYVLRRGKRQDADLQDKTSWRSGKVVFVRSNGTFAVEYDEDGSPKEDRIAENRLRRRLNNNDKDXXXXXXXXXXXXXXXXSNNDFGRYQDRVGSDEEYGDDF---HRQDNKFEAGDMAFAQTRGWGRKNWTRVTVDAYLGKGLYRVEFADGSGTKELDSKKLSHTDPSGT---THKSKSSARAKTD--PQSTKSRWLDAGDPVVARRAASSNDDGASGRKWEAAKVVKVIDEEYYSVLFSGDPEPVRVHFTEVKPL---EDHAADNSRLVTTGLFLRVTEPSFDLKIAASAARHTSPRLILATGERANEHDALWL 1530          
BLAST of mRNA_F-serratus_M_contig1327.2426.1 vs. uniprot
Match: H3GKU4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKU4_PHYRM)

HSP 1 Score: 69.3 bits (168), Expect = 7.110e-8
Identity = 87/361 (24.10%), Postives = 146/361 (40.44%), Query Frame = 0
Query:  734 RDRHGGSSSVRHNDGALEGDNVVEGAPNVLNPQSRVEGDVDDGTSKSAKTYVRLRQPQLKVGEPVLAKSLHDNVWAPGSIKKIIGDGRYDVLFEDGSSAEGLSFIYIRPLDLMALSDNGGDSPEMACPANRDEHKVGDTVYVLKRGQSPESTPLNMRNRELWRAGVIAGVSNDRYTVVYDGEEGRPQESRIPAGRIR---------PRQRIRQKAAEK--------GDAVLALSKKPGRGWVMGTVAGRTGNGLYKIEFSDGSEEDGVRFANLRHVESNDGEDDKQNKTD-----KPVMRAIRQRRFYAGELALARHPESRKWSMAKVLEARPDGRYDLKLFGDGDPVVRGLSFQSLRHID 1072
            R R  G+  V ++DG +E       A  ++ P+ R +   D+  ++     ++ +    +V + V A+         G IK+I GDG YDV++EDG   + +   +I      A +D   DS E   P  +    VG  V    +           + + L+   +    S+  Y + YD  E    E+R+ A +I               ++K A K        GD V A   K G+    G +A    NG Y +++ DG  E  V  + +   ES+  + DK   T      K   ++  QR    G+   A++    +    K+   R DG YD+K + DGD V   +    ++ +D
Sbjct:  191 RVRSDGTYDVNYDDGDVE----TRVAKELIEPEVRKQDSGDEAPAR-----MKAKSGGFRVDQSVKARYKGGKKLFSGRIKRIHGDGTYDVVYEDGDEEKRVKAEHIE-----ASADPKADSDEERAPTKK--LTVGKKVKARYK-----------KGKRLFPGKISRVRSDGTYDIDYDDGES---EARVEANQIEVSDTEDMFADSDEDQKKPATKKKTGKWGVGDRVKAYYGK-GKRLFPGKIAKVHMNGTYDVKYDDGDSEARVEASLIEDAESDKTDADKLRSTKAQDSPKTSSKSSTQRPLRVGDAVKAKYKGGARLFAGKITRERMDGTYDVK-YEDGD-VEERVEVDFIQRVD 518          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1327.2426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLZ1_ECTSI5.270e-23636.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H3GKU4_PHYRM7.110e-824.10Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..168
NoneNo IPR availableGENE3D2.30.30.140coord: 787..849
e-value: 6.1E-9
score: 37.5
NoneNo IPR availablePANTHERPTHR31917:SF25AGENET DOMAIN-CONTAINING PROTEINcoord: 793..1005
NoneNo IPR availablePANTHERPTHR31917FAMILY NOT NAMEDcoord: 793..1005
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 579..640
e-value: 13.0
score: 7.1
coord: 1323..1385
e-value: 47.0
score: 2.2
coord: 790..848
e-value: 0.0094
score: 25.1
coord: 399..458
e-value: 0.092
score: 21.9
coord: 1240..1298
e-value: 7.6
score: 9.0
coord: 1016..1076
e-value: 4.8
score: 10.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1327contigF-serratus_M_contig1327:38297..46114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1327.2426.1mRNA_F-serratus_M_contig1327.2426.1Fucus serratus malemRNAF-serratus_M_contig1327 38252..46326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1327.2426.1 ID=prot_F-serratus_M_contig1327.2426.1|Name=mRNA_F-serratus_M_contig1327.2426.1|organism=Fucus serratus male|type=polypeptide|length=1483bp
MKDPHDYPSTVLESSERSRSFLGGIQVRNDEPPIFNRPPDRPSTQTARGP
RTENLASRGRHSSETKDGNCIGKERLELTSLQQKVAERDLAKNQGQEQFK
RQDAEVAKLEYYIRQLVDERGGIDENIMKSIVSDLEKSALVRRTQKQFAD
LKDELIRKEEQLSSLKAMLNSNHVLRTVEANDSLVDKSEKLIAQSNQHAT
RDGNSEVLRSLHENTRPERAELEKLWAQNSAMRAEIARLRSELHAVHSRE
KKSNNHSGEGGDSRSFSSASEIERTGSCRRSRDHASNGEVVQRTFNPKSR
HESNNGPMFYEGQTVECRTVGSGTWKPAVVDSVHLLSDTAGSSRDRGSKA
YAYTVWFDNGGSEDNVPEVRIRSARGYELDDGGSPGAAHQSGGTIIRMRA
FRPGEIVFARDSGSKGKWSRAEVVRKDTKGMYCVLFDGKTEEHVLHPTML
RSTNDLKQNTAGGHHIDGGDVIGIDEDSRGEYTKSVMASPAEKAELRYAE
QRETRLEAARSALPEPVKVGHEVLARYLGREAWGAGTVVGQGKDELHLSV
DFDSGNFTENLPFIFTTPRLTGNLSSDQTHVFPGDAVLAQKDDTSSSDDW
YPARFKRYENDGYCSLVFVGEGAITSIRAERAQLLHGKTMNGGLVEIPGV
PPPPTKPVRAKKHREGDLVLACIPKIKAWTPALVTGSKGRGRYSVEWADG
EKSDSLLFMFMATLGYCGKGDRSTTVAGRHPSSRDRHGGSSSVRHNDGAL
EGDNVVEGAPNVLNPQSRVEGDVDDGTSKSAKTYVRLRQPQLKVGEPVLA
KSLHDNVWAPGSIKKIIGDGRYDVLFEDGSSAEGLSFIYIRPLDLMALSD
NGGDSPEMACPANRDEHKVGDTVYVLKRGQSPESTPLNMRNRELWRAGVI
AGVSNDRYTVVYDGEEGRPQESRIPAGRIRPRQRIRQKAAEKGDAVLALS
KKPGRGWVMGTVAGRTGNGLYKIEFSDGSEEDGVRFANLRHVESNDGEDD
KQNKTDKPVMRAIRQRRFYAGELALARHPESRKWSMAKVLEARPDGRYDL
KLFGDGDPVVRGLSFQSLRHIDRAQIPANNPHLAGCETRGDGDESQPLQN
GACIGDRTLDRSTSAKTEEDQPTNHRDVNDKKGDTQKSSSDMGDSVPALG
TRAGLNAGSDVYVLRRGKCADTEVEDTSAWRTGKIVSIRGNGSLAVEYDE
PGRPKEDRVAVNRVRQRYVVADRCVDARSGDNSAHSHRHERFSEGDVVVA
HTQESDGVSLVEVEANLGLSAYRVSFLDGSGTTEVASHQLRYKIPRFCFR
GLHVSKQHSREIIIFRENVVKMRKLRLGELVLAQRDCAGGKARSWFAATV
LESEGRGIYSLLFEGDEDPTRIHFARIRPLKMGDEGGETTERAGLESLVL
YVSEVSFNLSTAASAARRTLPYLLLATGERGEPWDAPWLTAMISGPAVTK
RGLSCAGGRARGPATPPGWTRTKMCSGSLSRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor