prot_F-serratus_M_contig1321.2409.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1321.2409.1
Unique Nameprot_F-serratus_M_contig1321.2409.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length171
Homology
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BLAST of mRNA_F-serratus_M_contig1321.2409.1 vs. uniprot
Match: D7G8D6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D6_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 1.400e-44
Identity = 75/122 (61.48%), Postives = 99/122 (81.15%), Query Frame = 0 
Query:    4 QPKVPKFRVPAAFVSPAALCLIAGTIWFFAMDSTSKEDAEATVQKEFPHVVRTSHEVDDRMKEFFRRVNNNDPREEERMRNLLNKGKGANYDAKRHHATSKDIQNFGFVPESSSPAIAAGSK 125
            +P+VP+FRVPAA VSPA+L L+ G +++F++D  S+++  + + KEFP VVR  HEVDDRMKEFF+RVNNNDPREEERMR+LLNKGKG++Y AKR HAT+KDI+ FGF+   S PA  + S+
Sbjct:    3 EPRVPRFRVPAALVSPASLFLVGGIVYYFSLDKPSEDELNSNIGKEFPDVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHATTKDIEEFGFI---SKPAGTSSSQ 121
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1321.2409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8D6_ECTSI1.400e-4461.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1321contigF-serratus_M_contig1321:158166..160495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1321.2409.1mRNA_F-serratus_M_contig1321.2409.1Fucus serratus malemRNAF-serratus_M_contig1321 153684..160854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1321.2409.1 ID=prot_F-serratus_M_contig1321.2409.1|Name=mRNA_F-serratus_M_contig1321.2409.1|organism=Fucus serratus male|type=polypeptide|length=171bp
MSEQPKVPKFRVPAAFVSPAALCLIAGTIWFFAMDSTSKEDAEATVQKEF
PHVVRTSHEVDDRMKEFFRRVNNNDPREEERMRNLLNKGKGANYDAKRHH
ATSKDIQNFGFVPESSSPAIAAGSKKVATAAETKSRSTAAESARGNDGAG
APDTGSGMGERKPGRKGWFW*
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