prot_F-serratus_M_contig1320.2397.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1320.2397.1
Unique Name	prot_F-serratus_M_contig1320.2397.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	116

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig1320.2397.1 vs. uniprot
Match: D8LB60_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB60_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 6.920e-35
Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 0

Query:    2 VLEAMQGPIGVALAAVAGAFATVGIVALFRRFCCKPTATYTAVNHGLDEEEMAFKKSMEQQH--GDEIDELFNFSGHEELDFDTNDLDHFEMLEVRPGRHRGGASAAGGVETGLGKD 116
            V+EAMQGPIGVA   +      VG VA+ RR  CK    YTAVNH LDEEE+AFK S+E Q+  GD+IDELFNFSG +EL+FDTNDLD+ EML++        A+  GGVETGLGKD
Sbjct:    4 VMEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLLCKTAVNYTAVNHSLDEEEIAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMLQMYRSNLGFPANPRGGVETGLGKD 120

[Close]

BLAST of mRNA_F-serratus_M_contig1320.2397.1 vs. uniprot
Match: A0A6H5K9N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9N2_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 3.860e-33
Identity = 69/117 (58.97%), Postives = 83/117 (70.94%), Query Frame = 0

Query:    2 VLEAMQGPIGVALAAVAGAFATVGIVALFRRFCCKPTATYTAVNHGLDEEEMAFKKSMEQQH--GDEIDELFNFSGHEELDFDTNDLDHFEMLEVRPGRHRGGASAAGGVETGLGKD 116
            V+EAMQGPIGVA   +      VG VA+ RR CCK    YTAVNH LDEEE AFK S+E Q+  GD+IDELFNFSG +EL+FDTNDLD+ EM+++    + G  +   GVETGLGKD
Sbjct:    4 VIEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLCCKTAVNYTAVNHSLDEEETAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMMQMYRS-NLGVPANPRGVETGLGKD 119

[Close]

BLAST of mRNA_F-serratus_M_contig1320.2397.1 vs. uniprot
Match: A0A836C8T1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8T1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.410e-13
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 0

Query:   25 GIVALFRRFCCKPTATYTAVNHGLDEEEMAFKKSMEQQHGDEIDELFNFSGHEELDFDTNDLDHFEMLEV 94
            GIV   RR      A+Y AVNHGLD+EE+ FKK M++ H +EIDELFNFS  ++L FD  +L   EML+ 
Sbjct:   28 GIVRFVRRRLLN--ASYQAVNHGLDDEELQFKKRMDEMHAEEIDELFNFSPDDDLAFDAEELGQIEMLDA 95

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1320.2397.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1320.2397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LB60_ECTSI	6.920e-35	59.83	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K9N2_9PHAE	3.860e-33	58.97	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836C8T1_9STRA	2.410e-13	52.86	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..30
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 31..116
None	No IPR available	TMHMM	TMhelix		coord: 10..30

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1320	contig	F-serratus_M_contig1320:50934..61999 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1320.2397.1	mRNA_F-serratus_M_contig1320.2397.1	Fucus serratus male	mRNA	F-serratus_M_contig1320 50934..61999 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1320.2397.1 ID=prot_F-serratus_M_contig1320.2397.1|Name=mRNA_F-serratus_M_contig1320.2397.1|organism=Fucus serratus male|type=polypeptide|length=116bp
MVLEAMQGPIGVALAAVAGAFATVGIVALFRRFCCKPTATYTAVNHGLDE
EEMAFKKSMEQQHGDEIDELFNFSGHEELDFDTNDLDHFEMLEVRPGRHR
GGASAAGGVETGLGKD