prot_F-serratus_M_contig132.2379.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig132.2379.1
Unique Name	prot_F-serratus_M_contig132.2379.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	201

Homology

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 9.370e-118
Identity = 174/200 (87.00%), Postives = 188/200 (94.00%), Query Frame = 0

Query:    1 MSRRTALDSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKREPAQPAADT-LHLDSTGGASSMC 199
            MSRR ++DS+SREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDG PMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKM+SFRTLKEWINELQAQGPQDIAIA+AGNKRDLES+REVESS+A+AYA+EIGAMFVETSAK  T VQD+FVELSKRLPKREP  PA+   L+LDS+G +SS C
Sbjct:    1 MSRRGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQREVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 200

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA)

HSP 1 Score: 263 bits (673), Expect = 5.050e-87
Identity = 129/193 (66.84%), Postives = 161/193 (83.42%), Query Frame = 0

Query:    8 DSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKREPAQPAADTLHLDSTGGASSMCC 200
            D ++REVKVVLLGDTGVGKSSLV RF+TN FK Y ESTIGASFMSK+IMVDG P+KFQIWDTAGQEKYHSLAPMYY+GA AAIVVYDITK ++F+TLK+W+ EL++QGP++I IA+AGNK DLESEREV+++ A++YA  IGA F+ETSAKT   V ++F  +SK+LP++E A    + L+L +  G+S  CC
Sbjct:    6 DQRAREVKVVLLGDTGVGKSSLVLRFITNEFKQYQESTIGASFMSKLIMVDGSPIKFQIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESEREVDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYHNKLNLKAGKGSSGGCC 198

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA)

HSP 1 Score: 258 bits (658), Expect = 9.660e-85
Identity = 132/193 (68.39%), Postives = 154/193 (79.79%), Query Frame = 0

Query:   10 KSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKREPAQPAADTLHLDSTGGAS--SMCC 200
            K+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKMIMV+  P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP++I IAIAGNK DLE +REV S+ A+AYA+EIGA+F+ETSAK DT V D+F+ +SK+LP       A   + LD  GG    + CC
Sbjct:    7 KAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKREVPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLPTAAAETNALPEI-LDPYGGVQQKNRCC 198

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: D8LEW7_ECTSI (Rab22, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW7_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 9.730e-85
Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = 0

Query:    1 MSRRTALDSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESER 134
            MSRR ++DS+SREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDG PMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKM+SFRTLKEWINELQAQGPQDIAIA+AGNKRDLES+R
Sbjct:    1 MSRRGSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 134

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT)

HSP 1 Score: 256 bits (653), Expect = 5.950e-84
Identity = 133/196 (67.86%), Postives = 155/196 (79.08%), Query Frame = 0

Query:    8 DSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKREPAQPAADTLHLDSTGGA---SSMCC 200
            +SK+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+  P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DLE +REV +S ARAYA EIGA+F+ETSAK DT V D+F+++S+ LP       A   + +D  GG    SS CC
Sbjct:    6 NSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAESNALPEI-VDPYGGGKKKSSGCC 200

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD)

HSP 1 Score: 254 bits (648), Expect = 3.310e-83
Identity = 132/195 (67.69%), Postives = 153/195 (78.46%), Query Frame = 0

Query:    9 SKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKREPAQPAADTLHLDSTGGA---SSMCC 200
            SK+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+  P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DLE +REV +S ARAYAEEIGA+F+ETSAK D  V D+F+++S+ LP       A   + +D  GG    S  CC
Sbjct:    6 SKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALPTASNESNALPEI-VDPYGGGKKKSGGCC 199

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: A0A067CI89_SAPPC (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CI89_SAPPC)

HSP 1 Score: 244 bits (624), Expect = 1.380e-79
Identity = 129/198 (65.15%), Postives = 151/198 (76.26%), Query Frame = 0

Query:    9 SKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKREPAQPAADTLHL----DSTGGASSM--CC 200
            +K+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S +TLK W+ EL+  GP +I IAIAGNK DL+ +REV S  A+AYA+EIGA+F+ETSAK DT V D+F  +S++LP      PA D   L    D  GG      CC
Sbjct:    5 TKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLQTLKNWVKELKQLGPDNIVIAIAGNKSDLKDKREVSSETAKAYADEIGAVFIETSAKEDTNVSDLFKTISQQLPS-----PAGDNNALPEIVDPYGGGKKKGGCC 197

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: A0A7S1CIP5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIP5_9STRA)

HSP 1 Score: 246 bits (629), Expect = 3.870e-79
Identity = 120/167 (71.86%), Postives = 143/167 (85.63%), Query Frame = 0

Query:    9 SKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLP 175
            +++REVKVVLLGDTGVGKSSLV RFVTNNFKPYSESTIGASFM+KM+++D  P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  SF TLK W+ EL+  GP+DI IAIAGNK DL  +REVE   AR YA  IGA+++ETSAKTD+ V+ +FV+++ RLP
Sbjct:   87 AEAREVKVVLLGDTGVGKSSLVLRFVTNNFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQREVEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLP 253

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: A0A3R7AA57_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AA57_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.130e-76
Identity = 128/198 (64.65%), Postives = 151/198 (76.26%), Query Frame = 0

Query:    9 SKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKREPAQPAADTLHLDS------TGGASSMCC 200
            +K+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DL+ +REV S+ A+AYA+EIGA+F+ETSAK DT V D+F  +S++LP      PA D   L        +G A   CC
Sbjct:  197 TKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLVTLKNWVKELKQLGPDNIVIAIAGNKSDLDDKREVSSATAKAYADEIGAVFIETSAKEDTNVLDLFKTISQQLPS-----PAGDNHALPEIVDPYGSGKAKGGCC 389

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BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Match: F0Y0I1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0I1_AURAN)

HSP 1 Score: 229 bits (585), Expect = 1.210e-73
Identity = 119/195 (61.03%), Postives = 140/195 (71.79%), Query Frame = 0

Query:    6 ALDSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKREPAQPAADTLHLDSTGGASSMCC 200
            A  +++RE KVVLLGDTGVGKSSL  R+VTN FKPYSESTIGASFMSKMI+VDG P K QIWDTAGQEKYHSLAPMYYRGA AAI+V+DITK  S   LK W+ ELQ QGP+ +A+AIAGNK DL   R V +  A+A+A +IGA++ ETSAK DT V  +F +L +R P    A+   D   L         CC
Sbjct:    3 AQPTRTRECKVVLLGDTGVGKSSLAQRYVTNTFKPYSESTIGASFMSKMILVDGAPCKCQIWDTAGQEKYHSLAPMYYRGAAAAILVFDITKPASLDKLKAWVRELQTQGPERLALAIAGNKADLADRRAVPADDAKAFAADIGALYCETSAKDDTNVSQLFADLVRRAPAGGAAR-TDDAFDLGHDAAPRRGCC 196

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig132.2379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KE80_9PHAE	9.370e-118	87.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2SUM8_9STRA	5.050e-87	66.84	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
F0WNT1_9STRA	9.660e-85	68.39	Rab5 family GTPase putative n=3 Tax=Albugo TaxID=6...	[more]
D8LEW7_ECTSI	9.730e-85	94.03	Rab22, RAB family GTPase n=1 Tax=Ectocarpus silicu...	[more]
D0N0I0_PHYIT	5.950e-84	67.86	Rab5 family GTPase, putative n=2 Tax=Phytophthora ...	[more]
K3X978_GLOUD	3.310e-83	67.69	Uncharacterized protein n=22 Tax=Oomycota TaxID=47...	[more]
A0A067CI89_SAPPC	1.380e-79	65.15	Uncharacterized protein n=7 Tax=Saprolegniaceae Ta...	[more]
A0A7S1CIP5_9STRA	3.870e-79	71.86	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
A0A3R7AA57_9STRA	1.130e-76	64.65	Uncharacterized protein n=4 Tax=Aphanomyces astaci...	[more]
F0Y0I1_AURAN	1.210e-73	61.03	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 48.92 coord: 152..174 score: 37.21 coord: 117..130 score: 39.45 coord: 55..77 score: 47.83 coord: 37..53 score: 30.04
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..172 e-value: 2.0E-10 score: 14.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 4.5E-74 score: 262.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..196 e-value: 2.3E-4 score: 13.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 8.2E-32 score: 121.7
None	No IPR available	GENE3D	3.40.50.300		coord: 8..200 e-value: 1.9E-64 score: 218.7
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 11..177
None	No IPR available	PANTHER	PTHR24073:SF366	RAS-RELATED PROTEIN RAB-5C	coord: 11..177
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..200 score: 31.909
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..167 e-value: 7.2E-30 score: 101.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..174 e-value: 7.3E-57 score: 191.5
IPR025662	Sigma-54 interaction domain, ATP-binding site 1	PROSITE	PS00675	SIGMA54_INTERACT_1	coord: 16..29
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..179

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig132	contig	F-serratus_M_contig132:176188..180879 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig132.2379.1	mRNA_F-serratus_M_contig132.2379.1	Fucus serratus male	mRNA	F-serratus_M_contig132 175876..181612 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig132.2379.1 ID=prot_F-serratus_M_contig132.2379.1|Name=mRNA_F-serratus_M_contig132.2379.1|organism=Fucus serratus male|type=polypeptide|length=201bp
MSRRTALDSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASF
MSKMIMVDGVPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNS
FRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVARAYAEEIGA
MFVETSAKTDTQVQDVFVELSKRLPKREPAQPAADTLHLDSTGGASSMCC
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR025662	Sigma_54_int_dom_ATP-bd_1
IPR027417	P-loop_NTPase