prot_F-serratus_M_contig1316.2354.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1316.2354.1
Unique Nameprot_F-serratus_M_contig1316.2354.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length150
Homology
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BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.900e-30
Identity = 65/145 (44.83%), Postives = 90/145 (62.07%), Query Frame = 0 
Query:    3 NAQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQALASLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAY 147
            +A LWHRR+GH++ RSL+++++  GNGV ++G +  CDVCAVG S Q    K+A + + + PFQLV  DLMGPF P A  G+ Y+ +  D   KW  V L+  K   + +LQLF  S + P   R+   R +KGGEYTS  F  Y
Sbjct:  265 SAALWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASY-DASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLMKEKSATVDALQLFNQSVLTPHELRLECVRADKGGEYTSWAFCKY 408
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BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 7.330e-27
Identity = 58/148 (39.19%), Postives = 90/148 (60.81%), Query Frame = 0 
Query:    3 NAQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQALASLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAYFQE 150
            +A LWHRR+GH+N +SL+++++   NGV     +  C  CA+G S Q    K+A + ++  PFQLV+ D +GPF P A  G++Y ++  D  TKW  + L+  K  ++ SL LF   TV+P G  I   R + G E+TS +F+ Y+Q+
Sbjct:  525 SANLWHRRMGHINSKSLDILRKAPNNGVDHTEDVKDCGPCALGKSTQQPHPKEATY-DVKRPFQLVFVDTLGPFTPTALGGFKYATKFVDQQTKWAEIGLMKDKTCSVDSLALFNKGTVVPTGEGIHCLRGDHGTEFTSAEFRQYYQD 671
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BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.850e-26
Identity = 55/144 (38.19%), Postives = 89/144 (61.81%), Query Frame = 0 
Query:    4 AQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQALASLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAY 147
            A LWHRR+GH+N +SL++++++  +G+ + G +  C  C +G S Q    K A +  ++ PFQLV+ D +GPF P A  G++Y ++  D  TKW  V L+  K  ++ +L+LF   TVIP  +RI   R +KG E+T+  ++ Y
Sbjct:  573 ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYG-VSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQY 715
[Close]
BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.900e-26
Identity = 55/144 (38.19%), Postives = 89/144 (61.81%), Query Frame = 0 
Query:    4 AQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQALASLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAY 147
            A LWHRR+GH+N +SL++++++  +G+ + G +  C  C +G S Q    K A +  ++ PFQLV+ D +GPF P A  G++Y ++  D  TKW  V L+  K  ++ +L+LF   TVIP  +RI   R +KG E+T+  ++ Y
Sbjct:  695 ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYG-VSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQY 837
[Close]
BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.900e-26
Identity = 55/144 (38.19%), Postives = 89/144 (61.81%), Query Frame = 0 
Query:    4 AQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQALASLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAY 147
            A LWHRR+GH+N +SL++++++  +G+ + G +  C  C +G S Q    K A +  ++ PFQLV+ D +GPF P A  G++Y ++  D  TKW  V L+  K  ++ +L+LF   TVIP  +RI   R +KG E+T+  ++ Y
Sbjct:  573 ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYG-VSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQY 715
[Close]
BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.570e-25
Identity = 61/150 (40.67%), Postives = 91/150 (60.67%), Query Frame = 0 
Query:    3 NAQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQALA--SLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAYFQE 150
            +A LWHRR+GH+N +SL+++++   NGV + G ++ C VC +G S Q    K+  +  +  PFQ V  D +GPF P A  G++Y ++  D  TKW  + L+  KDQA +  SL LF   TV+P G RI   R + G E+TS +F+ Y Q+
Sbjct:  285 SADLWHRRMGHINGKSLDVLRKEPVNGVDYTGNVNDCCVCPLGKSAQQPHPKQVTYGVLR-PFQHVSVDTLGPFTPTALGGFKYATKFVDQQTKWAEIVLM--KDQACSVDSLALFKKGTVVPTGERIHCLRGDPGTEFTSAEFRQYCQD 431
[Close]
BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.010e-24
Identity = 57/148 (38.51%), Postives = 89/148 (60.14%), Query Frame = 0 
Query:    3 NAQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQALASLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAYFQE 150
            +A LWHRR+GH+N ++L+++++   NGV + G + YC VC +G S Q    K+A +  +  PFQ    D +GPF P A  G +Y ++  D  TKW  + L+  +  ++ SL LF   TV+P G RI   R ++G E+TS +F+ Y Q+
Sbjct:   45 SADLWHRRMGHINGKNLDVLRKEQVNGVDYTGDVKYCSVCPLGKSAQQPHPKQATYGVLR-PFQ---HDTLGPFAPTALGGSKYATKFVDQQTKWAEIVLMKDETCSVDSLALFNKGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQD 188
[Close]
BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.300e-23
Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = 0 
Query:    4 AQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQ-ALASLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAY 147
            A LWHRR+GH+N +SL++++++  +G+ + G +  C  C +G S Q    K A +  ++ PFQLV+ D  GPF      G++Y ++  D  TKW  V L+  K   ++  L+LF   TVIP  +RI   R  KG E+T+  ++ Y
Sbjct:  478 ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYG-VSTPFQLVFVDTFGPFTSTTLGGFKYATKFVDQHTKWKEVVLMKDKTSCSIDGLELFNKGTVIPRSARIHVLRAGKGAEFTNAAYRQY 621
[Close]
BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 4.140e-23
Identity = 57/148 (38.51%), Postives = 80/148 (54.05%), Query Frame = 0 
Query:    3 NAQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQALASLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAYFQE 150
            NA  WHR L HLN RS+EL+++++ NGV F   +  CD+CA+  S QL   +K    E T P QLVY D MG   P A  G+ Y+S+ TD ++    + LL    + + +L  +      PLG RI   R   GGE  + +F  YF +
Sbjct:  307 NANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNR-ETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISETVRALHAYNMQVAAPLGRRIEIIRCESGGENVANEFTKYFMD 453
[Close]
BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 8.160e-21
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 0 
Query:    3 NAQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQLTRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVVSLLCTKDQALASLQLF 116
            +A LWHRRLGH++ RSL+++++ D NGV + G ++ CDVCA+G S Q    KKA + +++  FQ V  DLMGP  P A  G+ Y+S+     TKW  + L+ TK  A+  LQLF
Sbjct:   36 SADLWHRRLGHIDSRSLDVLRKIDDNGVDYTGPMETCDVCAIGKSSQRPHPKKATY-DVSRHFQ-VSTDLMGPISPPARRGFRYVSKFVHGNTKWKEIFLIKTKRDAIKILQLF 147
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1316.2354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1J1_9PHAE3.900e-3044.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBV6_9PHAE7.330e-2739.19Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJN3_9PHAE1.850e-2638.19Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJH6_9PHAE1.900e-2638.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE1.900e-2638.19Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KXM1_9PHAE1.570e-2540.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL37_9PHAE1.010e-2438.51Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JYB5_9PHAE2.300e-2336.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYD3_9PHAE4.140e-2338.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE8.160e-2145.61CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 55..150
e-value: 4.4E-10
score: 41.1
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 3..44
e-value: 1.2E-6
score: 28.3
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..150
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 4..150
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 60..150
score: 9.146
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 60..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1316contigF-serratus_M_contig1316:195317..195766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1316.2354.1mRNA_F-serratus_M_contig1316.2354.1Fucus serratus malemRNAF-serratus_M_contig1316 195317..195766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1316.2354.1 ID=prot_F-serratus_M_contig1316.2354.1|Name=mRNA_F-serratus_M_contig1316.2354.1|organism=Fucus serratus male|type=polypeptide|length=150bp
MTNAQLWHRRLGHLNKRSLELMQRRDGNGVAFDGLIDYCDVCAVGISHQL
TRLKKAKHAEITVPFQLVYGDLMGPFKPAACEGYEYLSRTTDHFTKWTVV
SLLCTKDQALASLQLFVTSTVIPLGSRIVTWRVNKGGEYTSEDFKAYFQE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR025724GAG-pre-integrase_dom
IPR039537Retrotran_Ty1/copia-like
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf