prot_F-serratus_M_contig1316.2353.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1316.2353.1
Unique Nameprot_F-serratus_M_contig1316.2353.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length181
Homology
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 1.150e-47
Identity = 80/164 (48.78%), Postives = 113/164 (68.90%), Query Frame = 0
Query:    2 IYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGS-EKAQASDDGILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTFTGTKRVEFNGVEDTTWKDNDLPKGACLK 164
            IY NEVY+GG +AAGIFLHRSSD AIVH+N VHD+QD G+ ++ES + + Y+N   +V++GIR+++G S N++H+N F+  +T G YTY+GS E      DG   DN F +N + N   GV +++ D T+I  N FTGT  +EF   ++T WK N LP+G C+K
Sbjct:  333 IYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIK 496          
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 1.830e-34
Identity = 74/173 (42.77%), Postives = 103/173 (59.54%), Query Frame = 0
Query:    2 IYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQASDD--GILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTF---TGTKRVEFNGVEDTTWKDNDLPKGACLKAEDST 169
            I+ N VY+GG+ A GIFLHRSSD+  V  N V+D++D G+ IMES     YDN   NV+YGIR+++G SRN + +N F  C   G YTY+G+++ +AS D  G+L DN F  N V     GV ++  +G     N F   +  +   F   ED  W +N +P G CLK +D+T
Sbjct:  724 IHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDGICLKGDDNT 893          
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.310e-33
Identity = 72/165 (43.64%), Postives = 96/165 (58.18%), Query Frame = 0
Query:    2 IYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQA-SDDGILEDNEFVDNDVRNTV--MGVYLRDMDGTLIEGNTFTGTKRVEFNGVEDTTWKDNDLPKGACL 163
            I+ NEVY+GG+ A GIFLHRSSD A VH+N V+++QD G+ +MES+D   YDN   N  YGIR+++G  RN I +N F      G YTY GS+     + +G   DN F  N +      +GV++++ D  +   N FTG    EF    DTTW DN    G CL
Sbjct:  456 IFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN--TGGGCL 618          
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: Q7XAK0_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK0_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.680e-27
Identity = 58/154 (37.66%), Postives = 84/154 (54.55%), Query Frame = 0
Query:    2 IYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQASDDGILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTFTGTKRVEFNGVEDTTWKDN 155
            I GNEVY G   +AGIFL+RSSD+A+V  NYVHD  D G+ +MESF+ +  DN+ +N +YG+RI++G  RN    N          Y+Y G++       G  +DN F +N +   +  + + D DGT   GN+F     + F+    T    N
Sbjct:   85 IQGNEVYGGASSSAGIFLYRSSDDAVVKGNYVHDNGDAGLAMMESFNADVSDNIFENNKYGVRISVGCGRNIFSKNVISGSTKYNAYSYLGTDAPDVVKSGRSKDNCFQENTIVGGIETLKIMDADGTEFIGNSFEDAVTIRFDDAARTVMSGN 238          
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: A0A6H5JTN9_9PHAE (MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTN9_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 8.880e-25
Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = 0
Query:    2 IYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQASDDGILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTF 136
            I GNEVY G + +AGIFLHRSSD+AIV  NYVHD  D G+ ++ESF+ +  DN  +N +YG+R ++G + N   +N   + +    Y+Y GS++      G  ++N F  N        + +++ DGT    N F
Sbjct:    5 IQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRFSVGCADNVFSENTISNNSKYNAYSYLGSDEPDVVSSGRSQNNVFSQNSFAGAAETIKIKEADGTQFLDNVF 139          
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: A0A6H5K1D5_9PHAE (MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D5_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.100e-23
Identity = 63/183 (34.43%), Postives = 96/183 (52.46%), Query Frame = 0
Query:    2 IYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQASDDGILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTFTGTKRVEFN-----------GVEDTTWKDNDLPKGACLKAEDSTFTGE 173
            I GN VY G   +AGIFLHRSSD A+V +N+ +   D G+ ++ES + E   N+ +  +YGIR+++G   N++++N   + +    YTY+GS+ A+    G  +DN F  N V      + L++ DGT I  N F     VEF+           G+ED T  + +L + AC    D     E
Sbjct:  110 IQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVYNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGVVEFSNTTENVVTGNVGLEDAT--EVELVEPACFAETDEASLAE 290          
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.630e-23
Identity = 67/202 (33.17%), Postives = 94/202 (46.53%), Query Frame = 0
Query:    2 IYGNEVYNGGKY------------------------AAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQASDDGILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTFTGTKRVEFNGVEDTTWKDND--------LPKGACL-KAEDSTF 170
            I+ NEVYN G +                        + GIFLHRSSD+AIV +NY  D  D G+ +MESF+ +  +N  ++ +YG+R+++G + N    N     +    YTY+GS+     D G  +DN F DN +      + L   DGT    NTF   K V F   +DT    N         + KGAC  K  DS +
Sbjct:  120 IHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVSKGACFDKKSDSDY 321          
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 8.110e-23
Identity = 52/135 (38.52%), Postives = 79/135 (58.52%), Query Frame = 0
Query:    2 IYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQASDDGILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTF 136
            I GNEVY G + +AGIFLHRSSD+AIV  NYVHD  D G+ ++ESF+ +  +N  +N +YG+R+++G + N   +N   + +    YTY GS++      G  ++N F  N        + +++ DGT    N F
Sbjct:  325 IQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 459          
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 2.610e-22
Identity = 63/183 (34.43%), Postives = 95/183 (51.91%), Query Frame = 0
Query:    2 IYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQASDDGILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTFTGTKRVEFN-----------GVEDTTWKDNDLPKGACLKAEDSTFTGE 173
            I GN VY G   +AGIFLHRSSD A+V +N+ +   D G+ ++ES + E   N+ +  +YGIR+++G   N++ +N   + +    YTY+GS+ A+    G  +DN F  N V      + L++ DGT I  N F     VEF+           G+ED T  + +L + AC    D     E
Sbjct:  410 IQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDAT--EVELVEPACFAETDEASLAE 590          
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 7.290e-22
Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = 0
Query:    2 IYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIEAYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQASDDGILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTF 136
            I GNEVY G + +AGIFLHRSSD+AIV  NYVHD  D G+ ++ESF+ +  +N  +N +YG+R ++G + N   +N   + A    Y+Y G+++      G  ++N F  N        + +++ DGT    N F
Sbjct:  321 IQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1316.2353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LRM4_ECTSI1.150e-4748.78Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LDB5_ECTSI1.830e-3442.77Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI1.310e-3343.64Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
Q7XAK0_9PHAE2.680e-2737.66Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A0A6H5JTN9_9PHAE8.880e-2538.52MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5K1D5_9PHAE1.100e-2334.43MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ9_9PHAE2.630e-2333.17Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI8.110e-2338.52Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LD45_ECTSI2.610e-2234.43Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI7.290e-2237.78Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 99..125
e-value: 2200.0
score: 4.8
coord: 126..151
e-value: 1800.0
score: 5.5
coord: 46..67
e-value: 1700.0
score: 5.5
coord: 69..91
e-value: 260.0
score: 10.4
coord: 23..45
e-value: 6.1
score: 15.8
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..176
e-value: 1.8E-18
score: 68.7
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 2..95
e-value: 1.0E-10
score: 41.3
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 3..140
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 3..140
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 3..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1316contigF-serratus_M_contig1316:105322..114323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1316.2353.1mRNA_F-serratus_M_contig1316.2353.1Fucus serratus malemRNAF-serratus_M_contig1316 105309..114349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1316.2353.1 ID=prot_F-serratus_M_contig1316.2353.1|Name=mRNA_F-serratus_M_contig1316.2353.1|organism=Fucus serratus male|type=polypeptide|length=181bp
MIYGNEVYNGGKYAAGIFLHRSSDNAIVHNNYVHDIQDGGITIMESFDIE
AYDNVIKNVEYGIRITMGGSRNYIHDNYFDSCATAGFYTYKGSEKAQASD
DGILEDNEFVDNDVRNTVMGVYLRDMDGTLIEGNTFTGTKRVEFNGVEDT
TWKDNDLPKGACLKAEDSTFTGEEPAESCY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR007742NosD_dom
IPR011050Pectin_lyase_fold/virulence