prot_F-serratus_M_contig131.2324.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig131.2324.1
Unique Nameprot_F-serratus_M_contig131.2324.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length171
Homology
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 139 bits (351), Expect = 3.940e-35
Identity = 69/166 (41.57%), Postives = 104/166 (62.65%), Query Frame = 0
Query:    6 VCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQHADLLTKPLD 171
            V  +V RP+D+ +IG+K ++K K G DG+VEKYK RL+AQGF QVEG+ Y E ++P   + SIR+LLA AA  D E+   D + AFL  +++EEIY+++P   +    AV RL KA+YGL QA R W  K   ++  +GF   +     + ++ D+H  ++   +D
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAVYVD 1191          
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 131 bits (329), Expect = 3.560e-32
Identity = 66/139 (47.48%), Postives = 93/139 (66.91%), Query Frame = 0
Query:    8 NQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFE 146
            ++V RP+++ V+G K ++K K G DG++EKYK RL+A+GF QVE V Y E ++PT   ++IR LLA AAA D E+   D + AFL  D+DEEIY+  P  F++ P  V RL KA+YGL QA R W  K   +  ++GF+
Sbjct:  982 DEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEIHQMDVKSAFLNGDLDEEIYMACPPGFEDRPDIVWRLRKALYGLKQASRQWYKKIRAEFESLGFK 1120          
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A401GM49_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GM49_9APHY)

HSP 1 Score: 130 bits (326), Expect = 8.960e-32
Identity = 64/138 (46.38%), Postives = 90/138 (65.22%), Query Frame = 0
Query:    8 NQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGF 145
            ++V RP+++ V+  K ++K K G DG++EKYK RL+A+GF QVEG+ + E ++P     SIR LLA  A  D E+   D + AFL  D+DEEIY+ IP  F++    + RLNKA+YGL QAG  W  K C +  A+GF
Sbjct:  911 DEVERPRNRKVVDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFTSIRTLLALTAKLDLEIHQMDVKSAFLNGDLDEEIYMNIPPSFRKDNKLIWRLNKALYGLKQAGHKWYKKICAEFEALGF 1048          
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 129 bits (325), Expect = 1.240e-31
Identity = 66/153 (43.14%), Postives = 96/153 (62.75%), Query Frame = 0
Query:    8 NQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSED 160
            ++V RP+++ VI  K ++K K G DG++EKYK RL+A+GF QVEG+ + E ++P    AS+R LLA AA  D E+   D + AFL  D+DEEIY+++P  F      V +LNKA+YGL QAGR W  K   +  A+GF         + +++D
Sbjct:  959 DEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDD 1111          
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 129 bits (324), Expect = 1.630e-31
Identity = 65/153 (42.48%), Postives = 97/153 (63.40%), Query Frame = 0
Query:    8 NQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSED 160
            ++V RP+++ VI  K ++K K G DG++EKYK RL+A+GF QVEG+ + E ++P    AS+R LLA AA  D E+   D + AFL  D+DEEIY+++P  F+     + +LNKA+YGL QAGR W  K   +  A+GF         + +++D
Sbjct:  636 DKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDD 788          
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A401H317_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H317_9APHY)

HSP 1 Score: 129 bits (323), Expect = 2.220e-31
Identity = 65/138 (47.10%), Postives = 92/138 (66.67%), Query Frame = 0
Query:    8 NQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGF 145
            ++V RP+++ VI  K ++K K G DG++EKYK RL+A+GF QVEG+ + E ++P    AS+R LLA AA  D E+   D + AFL  D+DEEIY+++P  F+     V +LNKA+YGL QAGR W  K   +  A+GF
Sbjct:  900 DEVERPQNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFRRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGF 1037          
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 127 bits (319), Expect = 7.200e-31
Identity = 65/153 (42.48%), Postives = 95/153 (62.09%), Query Frame = 0
Query:    8 NQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSED 160
            ++V RP+D+ V+G K +++ K G DG++EKYK R++A+GF QVEGV YT+ ++P    ASIR LLA AA  D E+   D + AFL  ++DEEI++  P  FQ     V +L KA+YGL QA R W  K   +  ++GF         + ++ED
Sbjct:  315 DEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMDVKSAFLNGNLDEEIFMACPPGFQGARNIVWQLRKALYGLKQASREWYKKIRAEFESLGFTRSNADHSVFYKNED 467          
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 127 bits (319), Expect = 7.900e-31
Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    8 NQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSED 160
            ++V +P+ + V+G K ++K K G DG +EKYK RL+A+GF QVEG+ YT+ ++P    ASIR +LA AA  D ++   D + AFL  D+DEEIY+  P  F    G+V RL K++YGL QA R W  K   +   +GFE        +V+ E+
Sbjct: 1022 DEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVEN 1174          
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A5E8C1Z7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1Z7_9ASCO)

HSP 1 Score: 126 bits (317), Expect = 1.450e-30
Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    4 NFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPE--EFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQHADLL 166
            N V   V  P  +  +GTK + K+K+  DG ++KYK RL+ QGF Q  GV Y + ++P    +++R++ A +AAK+ E+ H D + AFL  D++E+IYV+ P   +    PG V +LNK++YGL QA  CWN K  D + A+G++A K  P  + +   +   ++
Sbjct:  608 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKINGKDFSII 772          
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A5E8BZM0_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZM0_9ASCO)

HSP 1 Score: 126 bits (317), Expect = 1.450e-30
Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    4 NFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPE--EFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQHADLL 166
            N V   V  P  +  +GTK + K+K+  DG ++KYK RL+ QGF Q  GV Y + ++P    +++R++ A +AAK+ E+ H D + AFL  D++E+IYV+ P   +    PG V +LNK++YGL QA  CWN K  D + A+G++A K  P  + +   +   ++
Sbjct:  921 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKINGKDFSII 1085          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK3.940e-3541.57Integrase catalytic domain-containing protein (Fra... [more]
A0A4Y9XTU1_9APHY3.560e-3247.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GM49_9APHY8.960e-3246.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A401G4V0_9APHY1.240e-3143.14Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H123_9APHY1.630e-3142.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H317_9APHY2.220e-3147.10Retrovirus-related Pol polyprotein from transposon... [more]
A0A1C7MSU6_GRIFR7.200e-3142.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A1M2VV58_TRAPU7.900e-3142.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A5E8C1Z7_9ASCO1.450e-3037.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8BZM0_9ASCO1.450e-3037.58Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..159
e-value: 4.3E-34
score: 118.2
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..138
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 10..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig131contigF-serratus_M_contig131:582546..583972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig131.2324.1mRNA_F-serratus_M_contig131.2324.1Fucus serratus malemRNAF-serratus_M_contig131 582519..583972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig131.2324.1 ID=prot_F-serratus_M_contig131.2324.1|Name=mRNA_F-serratus_M_contig131.2324.1|organism=Fucus serratus male|type=polypeptide|length=171bp
MVENFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQV
EGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI
YVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKG
GPVPYVRSEDQHADLLTKPLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like