prot_F-serratus_M_contig130.2228.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig130.2228.1
Unique Name	prot_F-serratus_M_contig130.2228.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	282

Homology

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BLAST of mRNA_F-serratus_M_contig130.2228.1 vs. uniprot
Match: D8LTA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA7_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 1.500e-60
Identity = 110/164 (67.07%), Postives = 131/164 (79.88%), Query Frame = 0

Query:  120 DDMDAAAM-AAACLDRLTFSEFREEVLSRTQHAHHSAXXXXXXXXDAISGQYESIFKTLMNKIKTLEINQSLFSLYVDDVHACYQDVIAQIIQEQKRARASQSELLHAQTVHIMHMSDQWPAFHALQKRIVEVEDRMLLSSMAWFSSLLCLAILVCSCCVNICR 282
            ++ D A + AAACLD L+FSEFREEVL+RTQ A  SA         AI GQYESIFKTLMNKIKTLEINQSLF LY+DDVH CYQDVIAQ++QEQ+RARAS+S+LL+ Q  H+ H+ DQWPAF  LQ ++VEVE+RMLLSS+AWF+SL CL ++VCSCC   CR
Sbjct:  524 EETDVAVLSAAACLDTLSFSEFREEVLARTQQAQQSAGGGV-----AIGGQYESIFKTLMNKIKTLEINQSLFGLYIDDVHGCYQDVIAQMLQEQERARASRSQLLNTQAAHLAHIGDQWPAFQELQAKVVEVENRMLLSSLAWFTSLFCLVLMVCSCCFKTCR 682

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BLAST of mRNA_F-serratus_M_contig130.2228.1 vs. uniprot
Match: A0A6H5JRG7_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG7_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 3.200e-59
Identity = 110/167 (65.87%), Postives = 133/167 (79.64%), Query Frame = 0

Query:  117 VRVDDMDAAAMA-AACLDRLTFSEFREEVLSRTQHAHHSAXXXXXXXXDAISGQYESIFKTLMNKIKTLEINQSLFSLYVDDVHACYQDVIAQIIQEQKRARASQSELLHAQTVHIMHMSDQWPAFHALQKRIVEVEDRMLLSSMAWFSSLLCLAILVCSCCVNICR 282
            V V++ D A ++ AACLD L+FSEFREEVL+RTQ A  SA         AI GQYESIFKTLMNKIKTLEINQSLF LY+DDVH CYQ+VIAQ+IQEQ+RARAS+S+LL+ Q  H+ H+ DQWPAF  LQ ++ EVE+RMLLSS+AWF+SL CL ++VCSCC+  CR
Sbjct:  973 VLVEETDVAVLSTAACLDTLSFSEFREEVLARTQQAQQSAGGGV-----AIGGQYESIFKTLMNKIKTLEINQSLFGLYIDDVHGCYQNVIAQMIQEQERARASRSQLLNTQAAHLAHIGDQWPAFQELQAKVAEVENRMLLSSLAWFTSLFCLVLIVCSCCLKACR 1134

[Close]

BLAST of mRNA_F-serratus_M_contig130.2228.1 vs. uniprot
Match: A0A4D9DBJ9_9STRA (SUN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBJ9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.950e-9
Identity = 44/146 (30.14%), Postives = 79/146 (54.11%), Query Frame = 0

Query:  131 CLDRLTFSEFREEVLSRTQHAHHSAXXXXXXXXDAI-SGQ-YESIFKTLMNKIKTLEINQSLFSLYVDDVHACYQDVIAQIIQEQKRARASQSE---LLHAQTVHIMHMSDQWPAFHALQKRIVEVEDRMLLSSMAWFSSLLCLAI 271
            CL ++  S+F+++ L++ Q    +          ++ SG  Y++IFKTLM+++ +LEINQS+F +YV ++H+C+  V+  ++ EQ RAR    E   LL A+      +  Q        +R+  +E   L   +AW + + CL +
Sbjct:  709 CLQQMRLSDFKKQKLAKLQDDPRTKDHGTGSTATSLGSGSPYDNIFKTLMDEMASLEINQSIFDVYVSNLHSCFVQVVDDVLLEQDRARLEALETIGLLQAR------LQSQAAVNEQFLRRMQRLESMSLAGGLAWIALIACLVL 848

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig130.2228.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig130.2228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LTA7_ECTSI	1.500e-60	67.07	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JRG7_9PHAE	3.200e-59	65.87	SUN domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A4D9DBJ9_9STRA	1.950e-9	30.14	SUN domain-containing protein n=2 Tax=Monodopsidac...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12953	MEMBRANE PROTEIN CH1 RELATED	coord: 8..248
None	No IPR available	PANTHER	PTHR12953:SF0	SUN DOMAIN-CONTAINING OSSIFICATION FACTOR	coord: 8..248
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..259
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 260..281
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 282..282
None	No IPR available	TMHMM	TMhelix		coord: 259..281

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig130	contig	F-serratus_M_contig130:107088..108820 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig130.2228.1	mRNA_F-serratus_M_contig130.2228.1	Fucus serratus male	mRNA	F-serratus_M_contig130 107086..108820 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig130.2228.1 ID=prot_F-serratus_M_contig130.2228.1|Name=mRNA_F-serratus_M_contig130.2228.1|organism=Fucus serratus male|type=polypeptide|length=282bp
RSCGSVDKDVESTSNTIHGGVETASRLETDKIHASDGEASNREAIEQGGS
PAEQAGPDTELPLEAADDSRDPREEAAARTQTLSMSPPETLPSDNEAVSS
GSALYVTEDAQGGEPLVRVDDMDAAAMAAACLDRLTFSEFREEVLSRTQH
AHHSAGGGNGGGGDAISGQYESIFKTLMNKIKTLEINQSLFSLYVDDVHA
CYQDVIAQIIQEQKRARASQSELLHAQTVHIMHMSDQWPAFHALQKRIVE
VEDRMLLSSMAWFSSLLCLAILVCSCCVNICR