prot_F-serratus_M_contig13.2212.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig13.2212.1
Unique Nameprot_F-serratus_M_contig13.2212.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length179
Homology
BLAST of mRNA_F-serratus_M_contig13.2212.1 vs. uniprot
Match: D7FY88_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY88_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 8.740e-50
Identity = 90/178 (50.56%), Postives = 120/178 (67.42%), Query Frame = 0
Query:    2 LFYFLGLLIAESPIKTLAMCFCFVAVGCLGFVNFSVVTRAEDLWVPTNSISFDHREIVLSYFDNAEAYSVLVLENPEEGGSVLNKESMDTFWEIHAKINEVETLEGNTFAELCTKEVDGVTCSQPREGVGRFWGNNFSTYSATVDNDEDVLAAVNLEWFPDGAPVSLAALFGNSVTLD 179
            LFY LG  +A  P +TL +   FV   C GF NF V    EDLWVP +S++ D R+I+L  FD    ++  ++E+P E GSVL KES+D  WE+ A +  V+ ++GNT+A++C KE+DGVTC QP  G+ RFWG+ F+TY A+V ND DVLAAVN   FPDG+ V+  ALFGN +T D
Sbjct:   40 LFYRLGYWVATHPKRTLLISLVFVIACCFGFANFRVEADGEDLWVPADSLTNDQRDIILGDFDGGGEFASFLVESPSETGSVLTKESVDAVWELDAIVMAVK-VDGNTYADVCLKELDGVTCEQPFRGITRFWGD-FATYEASVSNDADVLAAVNATTFPDGSAVNQQALFGNGITYD 215          
BLAST of mRNA_F-serratus_M_contig13.2212.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 4.980e-47
Identity = 85/177 (48.02%), Postives = 118/177 (66.67%), Query Frame = 0
Query:    3 FYFLGLLIAESPIKTLAMCFCFVAVGCLGFVNFSVVTRAEDLWVPTNSISFDHREIVLSYFDNAEAYSVLVLENPEEGGSVLNKESMDTFWEIHAKINEVETLEGNTFAELCTKEVDGVTCSQPREGVGRFWGNNFSTYSATVDNDEDVLAAVNLEWFPDGAPVSLAALFGNSVTLD 179
            FY LG  +A +P +TL +   FV   C GF NF++    EDLWVP +S++ DH+ IVL  FD    ++  ++E+P E GSVL KES+D  WE+ A +  VE + GNT+A++C KE+DGVTC     G+ RFWG+ F+TY A+V +D D+LA VN+  FPDG+ V+  ALFGN +T D
Sbjct:   39 FYRLGYRVATNPKRTLLISLAFVVACCFGFANFTIEADGEDLWVPADSLARDHQSIVLEDFDGDGEFASFLVESPSETGSVLTKESVDAIWELDAIVRAVE-VGGNTYADVCGKELDGVTCEPVFRGITRFWGD-FATYEASVTSDADILATVNVATFPDGSTVNQQALFGNGITYD 213          
BLAST of mRNA_F-serratus_M_contig13.2212.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 1.800e-44
Identity = 83/177 (46.89%), Postives = 115/177 (64.97%), Query Frame = 0
Query:    3 FYFLGLLIAESPIKTLAMCFCFVAVGCLGFVNFSVVTRAEDLWVPTNSISFDHREIVLSYFDNAEAYSVLVLENPEEGGSVLNKESMDTFWEIHAKINEVETLEGNTFAELCTKEVDGVTCSQPREGVGRFWGNNFSTYSATVDNDEDVLAAVNLEWFPDGAPVSLAALFGNSVTLD 179
            FY LG  +A  P +TL +   FV   C GF NF +    EDLWVP +S++ D ++I++  FD+   Y+  ++E+P   GSVL KES+D  WE+ A +  VE   GNT+ ++C KE+DGVTC  P  G+ RFWG+ F TY A+V +D D+LAAVN+  FPDG+ V+  ALFGN +T D
Sbjct:   42 FYRLGYWVATHPKRTLLISLVFVIACCFGFANFRIEADGEDLWVPADSLAKDQQDIIIQDFDDDGEYAAFLVESPS--GSVLTKESVDAIWELDAIVMAVEAG-GNTYVDVCPKELDGVTCEPPFRGITRFWGD-FDTYEASVTSDADILAAVNVATFPDGSTVNQLALFGNGITYD 214          
BLAST of mRNA_F-serratus_M_contig13.2212.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.250e-39
Identity = 77/177 (43.50%), Postives = 107/177 (60.45%), Query Frame = 0
Query:    3 FYFLGLLIAESPIKTLAMCFCFVAVGCLGFVNFSVVTRAEDLWVPTNSISFDHREIVLSYFDNAEAYSVLVLENPEEGGSVLNKESMDTFWEIHAKINEVETLEGNTFAELCTKEVDGVTCSQPREGVGRFWGNNFSTYSATVDNDEDVLAAVNLEWFPDGAPVSLAALFGNSVTLD 179
            FY LG  +A  P  TL +   FVA+  +GFVNF++VT   D                         Y++L+LE+  EGG+VL K S+D  W++++++  VET  GNT+ +LCT + DGVTC QP  G+ RFWGN+F  Y A   +D DVLAA+N++ +PDG  VSL A+FGNS+T D
Sbjct:   46 FYRLGYWVATHPTLTLLLNLVFVALCSIGFVNFTIVTDGSD-------------------------YALLLLESAVEGGNVLTKASVDMLWDLNSRVMLVETESGNTYTDLCTTDADGVTCKQPFRGITRFWGNDFDIYEAAATSDADVLAAINMDTYPDGQAVSLEAVFGNSLTYD 197          
BLAST of mRNA_F-serratus_M_contig13.2212.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 2.390e-32
Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = 0
Query:    3 FYFLGLLIAESPIKTLAMCFCFVAVGCLGFVNFSVVTRAEDLWVPTNSISFDHREIVLSYFDNAEAYSVLVLENPEEGGSVLNKESMDTFWEIHAKINEVETLEGNTFAELCTKEVDGVTCSQPREGVGRFWGNNFSTYSATVDNDEDVLAAVNLEWFPDGAPVSLAALFGNSVTLD 179
            FY LG  +A  P +TL +    V   C GF NF    R E                     D+ E Y+  ++E+P E GSVL KES+D  WE+ A +  VE ++GNT+A+LC+KE+DG TC     G+ RFWG+ F TY A+V +D D+LAAVN+  FPDG+ VS  ALFGN +T D
Sbjct:   42 FYRLGYWVATHPKRTLLISLVLVIACCFGFANF----RIEG--------------------DDGE-YATFLVESPSETGSVLTKESVDAVWELDAIVMAVE-VDGNTYADLCSKELDGATCEPVFRGITRFWGD-FYTYEASVTSDADILAAVNVTTFPDGSAVSEQALFGNGITYD 191          
BLAST of mRNA_F-serratus_M_contig13.2212.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.840e-17
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0
Query:  104 TLEGNTFAELCTKEVDGVTCSQPREGVGRFWGNNFSTYSATVDNDEDVLAAVNLEWFPDGAPVSLAALFGNSVTLD 179
            T  G+T+A++C KE+DGVTC+ P  GV RFW + F+ Y A+V +D DVL AVN+E FPDG PV+   LFGN +  D
Sbjct:   19 TWGGHTYADVCAKELDGVTCAAPFRGVTRFW-DGFAAYEASVTSDADVLEAVNVEAFPDGFPVNQQTLFGNGIVYD 93          
BLAST of mRNA_F-serratus_M_contig13.2212.1 vs. uniprot
Match: A0A812KTD5_SYMPI (NPC1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812KTD5_SYMPI)

HSP 1 Score: 71.2 bits (173), Expect = 3.640e-11
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 0
Query:   11 AESPIKTLAMCFCFVAVGCL----GFVNFSVVTRAEDLWVPTNSISFDHREIVLSYFDNAEAYSVLVLENPEEGGSVLNKESMDTFWEIHAKINEVETLEGNTFAELCTKEVDGVTCSQPREGVGRFWGNNFST-YSATVDNDEDVLAAVNLEWFPDGAP 165
            A +P K    C      GCL    G V FS V +A DLWV  NS          +YF  +   +  VL   ++GG+VL  ++M   + +   +  +    G  F+ LC +   G        G+ R++G   S  +++TV N  D+L AVN   +PDGAP
Sbjct:  315 ARNPWK----CITVTVAGCLLCAVGVVRFSAVNQARDLWVDQNSQVMKDLVWTENYFTFSGRVN-RVLVTAKDGGNVLRMDTMPELFRLADDVKALVDENGKNFSNLCIEIPTGCL----NNGMPRYFGRGISADFNSTVQNQADILTAVNKANYPDGAP 465          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FY88_ECTSI8.740e-5050.56SSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FY95_ECTSI4.980e-4748.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FY89_ECTSI1.800e-4446.89Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
D8LCK9_ECTSI1.250e-3943.50Similar to Patched domain-containing protein 3, pa... [more]
D7FY98_ECTSI2.390e-3243.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCK4_ECTSI1.840e-1753.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A812KTD5_SYMPI3.640e-1131.25NPC1 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10796:SF130coord: 1..158
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 1..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..35
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:1054403..1060468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2212.1mRNA_F-serratus_M_contig13.2212.1Fucus serratus malemRNAF-serratus_M_contig13 1054403..1060468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig13.2212.1 ID=prot_F-serratus_M_contig13.2212.1|Name=mRNA_F-serratus_M_contig13.2212.1|organism=Fucus serratus male|type=polypeptide|length=179bp
KLFYFLGLLIAESPIKTLAMCFCFVAVGCLGFVNFSVVTRAEDLWVPTNS
ISFDHREIVLSYFDNAEAYSVLVLENPEEGGSVLNKESMDTFWEIHAKIN
EVETLEGNTFAELCTKEVDGVTCSQPREGVGRFWGNNFSTYSATVDNDED
VLAAVNLEWFPDGAPVSLAALFGNSVTLD
back to top