prot_F-serratus_M_contig13.2206.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig13.2206.1
Unique Name	prot_F-serratus_M_contig13.2206.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	144

Homology

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BLAST of mRNA_F-serratus_M_contig13.2206.1 vs. uniprot
Match: D7FYY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYY2_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 9.880e-23
Identity = 57/131 (43.51%), Postives = 82/131 (62.60%), Query Frame = 0

Query:    1 MRGMTLGRTLLIGVALASVACGASAKKLWGLDVGNKEEKGEFENLLQKAAKEDSGSIDVGEMNEDDIGEALKALADLDLSGLSLSDLCTSAIDVVLGVVQDDEWVEQYAEPGVIGVYLRVPALTISSGNTG 131
            MRGM     +++ + L S  C  SA KLWG+DVG KE+KGEF +LL KA   D G    G +  D++G  L  +AD+DLS LSLS+L T+ ID+ L  ++D++++ Q+AEPGV+G   +   L+   G  G
Sbjct:    8 MRGMRRSLCVVVSLVLLSAVC-VSAGKLWGVDVGKKEDKGEFASLLNKATGMDRGDGAGGGIG-DEVGSILAQVADMDLSQLSLSELGTNVIDMFLETIKDEQFISQFAEPGVLGELAQNSGLSALLGEDG 136

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig13.2206.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig13.2206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FYY2_ECTSI	9.880e-23	43.51	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 22..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..143
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..21 score: 5.0
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..25 score: 0.809

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig13	contig	F-serratus_M_contig13:729151..739855 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig13.2206.1	mRNA_F-serratus_M_contig13.2206.1	Fucus serratus male	mRNA	F-serratus_M_contig13 721978..739873 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig13.2206.1 ID=prot_F-serratus_M_contig13.2206.1|Name=mRNA_F-serratus_M_contig13.2206.1|organism=Fucus serratus male|type=polypeptide|length=144bp
MRGMTLGRTLLIGVALASVACGASAKKLWGLDVGNKEEKGEFENLLQKAA
KEDSGSIDVGEMNEDDIGEALKALADLDLSGLSLSDLCTSAIDVVLGVVQ
DDEWVEQYAEPGVIGVYLRVPALTISSGNTGRGRWKSKTWWIC*