prot_F-serratus_M_contig13.2186.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig13.2186.1
Unique Nameprot_F-serratus_M_contig13.2186.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length233
Homology
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: A0A6H5LGD3_9PHAE (TAFII28 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGD3_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 3.290e-47
Identity = 114/238 (47.90%), Postives = 143/238 (60.08%), Query Frame = 0
Query:    1 MSNDGNILGTRKYPE-VQPSSSTPVKSEPAVHNKEHPSGSAGADAGIGASAIRSTAGHSLGINLLKRQRSGGIGGVAVGRTEGENVVVGSAGDVPVDKLEPEQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQLAISGTAPQLSSSSGRAPRVGGSARK-----SLLGGRSALMRRDAI 232
            M  DG+ILG R+ PE  QP+       EP   +  +P                  AG S     LKR+RS   G  A  R E + VV   AG+VPVD+L PEQ++RY+AW RSR ER+ +RELILD+AAPTL RS+ESGQG G ++ETS + ++SMAK +VGDLVEEAKRAQ+ RG++GPLKP DLL ARE LA  G  P L S + R   + G   +     SLLGG   L R + I
Sbjct:    1 MDGDGDILGMRRRPEPAQPA-------EPTTASAGNPXXXXXXXXXXXXXXXXXXAGASP----LKRKRSLAAG--AATRAEFQ-VVESVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIESGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLKARETLARDGRGPPLRSPTTRDRGLAGVQGRNGGGGSLLGGPGVLTRGNPI 224          
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: D7FZG3_ECTSI (TAFII28 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG3_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 1.340e-32
Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 0
Query:   57 HSLGINLLKRQRSGGIGGVAVGRTEGENVVVGSAGDVPVDKLEPEQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEE 166
            H+ G + LKRQRS   G  A  R EG+ VV G AG+VPVD+L PEQ++RY+AW RSR ER+ +RELILD+AAPTL RS+E GQG G ++ETS + ++SMAK +VGDLVEE
Sbjct:   47 HAAGASPLKRQRSLAAGAAA--RAEGQ-VVEGVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEE 153          
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: R1EP99_EMIHU (TAFII28 domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EP99_EMIHU)

HSP 1 Score: 68.6 bits (166), Expect = 7.610e-11
Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:  101 EQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQLAISGTAPQ 200
            EQ++R++ +KRS+L R+ +R+L+ D                G+  E   +++SS+AK YVG+LVE A+ A    GE GPL+P+ L  A+     +GT PQ
Sbjct:   63 EQLERFEQYKRSKLPRAAMRKLMQD--------------VVGSSTERCAIILSSLAKSYVGELVETAREAATKAGEEGPLQPRHLRAAQRAAQRNGTVPQ 148          
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: A0A7S2FUI1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FUI1_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 2.000e-10
Identity = 34/100 (34.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:  100 PEQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQLAISGTAP 199
            PEQ++R++ WKRS+  R+ ++ L+              G+  G+  E   +V++ +AK++VGDLVE A+    + GE+GP++P  L  A  Q   SG+ P
Sbjct:   61 PEQIERFEHWKRSKFPRAAMKRLM--------------GEVLGSSTEKGAIVLAGVAKVFVGDLVEAARERMAAMGETGPIQPSHLRQAFRQAQRSGSVP 146          
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: A0A7S0Q4X8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q4X8_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 1.400e-9
Identity = 35/102 (34.31%), Postives = 57/102 (55.88%), Query Frame = 0
Query:  101 EQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQLAISGTAPQLS 202
            EQ+ R++ +KRS+  R+ +R L+ D                G+  E S ++++S+AKM+VGDLVE A  A  + GE+GP++P  L +A  +   +G  P  S
Sbjct:   45 EQLARFEQYKRSKFPRAAMRRLMAD--------------VVGSSTERSAIILASIAKMFVGDLVESAVEAMAAAGETGPVRPHHLRNAHHKAKRAGIVPSSS 132          
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: A0A6G1S910_9ACAR (Transcription initiation factor TFIID subunit 11 n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1S910_9ACAR)

HSP 1 Score: 62.4 bits (150), Expect = 6.790e-9
Identity = 33/96 (34.38%), Postives = 57/96 (59.38%), Query Frame = 0
Query:   97 KLEPEQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQL 192
            K+  E++ RY+ ++RS   ++ ++ L+      T+T +        A+ +  ++ MS MAK++VG+LVEEA R Q   GESGP++PK + +A   L
Sbjct:   35 KMTEEELNRYEMFRRSTFPKASIKRLM-----QTMTGA--------AMSQNVVIAMSGMAKVFVGELVEEAIRIQARYGESGPIEPKHIREAHRVL 117          
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: I0YMJ3_COCSC (TAFII28-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YMJ3_COCSC)

HSP 1 Score: 63.9 bits (154), Expect = 6.980e-9
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 0
Query:   98 LEPEQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQLAISGTAP 199
            L PEQM RY+A++RS+L            A P++ + L S  G  A    S +VM  +AK++VGDLVE A+      G++GPL+P  L +A ++L   G  P
Sbjct:   98 LTPEQMDRYEAFRRSKL------------AKPSMRKLLHSVTGQ-APHMNSTIVMCGIAKLFVGDLVETARMVAAEMGDNGPLRPAHLQEAYQKLDRQGKIP 186          
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: UPI00053C30E2 (transcription initiation factor TFIID subunit 11-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C30E2)

HSP 1 Score: 63.9 bits (154), Expect = 8.230e-9
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:  101 EQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQLAISGTAPQ 200
            +QM RY++++RS  +RS ++ L            L S  GT  +     +VM S+AKM+VGDLVE+A+     R +SGP++P  + +A  +L + G  P+
Sbjct:  114 DQMNRYESYRRSAFQRSSMKRL------------LTSITGTQTINLQITIVMCSIAKMFVGDLVEKARTVMGERKDSGPIRPCHIREAYRRLKLEGKVPK 201          
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: UPI000C1D2D89 (transcription initiation factor TFIID subunit 11-like isoform X1 n=5 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D2D89)

HSP 1 Score: 63.9 bits (154), Expect = 9.450e-9
Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = 0
Query:  101 EQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQLAISGTAPQLS 202
            EQM RY++++RS  ++S ++ L            L S  G+  +     +V+S +AKM+VG+LVE A+     RGESGP++P  + +A  +L + G  P+ S
Sbjct:  124 EQMSRYESFRRSGFQKSNMKRL------------LTSITGSAKISMPMTIVVSGIAKMFVGELVETARIVMADRGESGPIRPCHMREAYRRLKLEGKIPKRS 213          
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Match: A0A314XX70_PRUYE (Transcription initiation factor TFIID subunit 11 n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314XX70_PRUYE)

HSP 1 Score: 61.2 bits (147), Expect = 1.180e-8
Identity = 34/108 (31.48%), Postives = 59/108 (54.63%), Query Frame = 0
Query:   95 VDKLEPEQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSILVMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQLAISGTAPQLS 202
            + +   EQM RY++++R+  ++S ++ L            L S  GT  +     +V+S +AKM+VG+LVE A+     R ESGP++P  + +A  +L + G  P+ S
Sbjct:    8 LSRFSEEQMSRYESFRRAGFQKSNMKRL------------LGSISGTPKISMPMTIVVSGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRKLKLEGKVPKRS 103          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LGD3_9PHAE3.290e-4747.90TAFII28 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FZG3_ECTSI1.340e-3260.91TAFII28 domain-containing protein n=1 Tax=Ectocarp... [more]
R1EP99_EMIHU7.610e-1137.00TAFII28 domain-containing protein n=2 Tax=Emiliani... [more]
A0A7S2FUI1_9EUKA2.000e-1034.00Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S0Q4X8_9EUKA1.400e-934.31Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A6G1S910_9ACAR6.790e-934.38Transcription initiation factor TFIID subunit 11 n... [more]
I0YMJ3_COCSC6.980e-938.24TAFII28-domain-containing protein n=1 Tax=Coccomyx... [more]
UPI00053C30E28.230e-935.00transcription initiation factor TFIID subunit 11-l... [more]
UPI000C1D2D899.450e-934.31transcription initiation factor TFIID subunit 11-l... [more]
A0A314XX70_PRUYE1.180e-831.48Transcription initiation factor TFIID subunit 11 n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006809TAFII28-like proteinPFAMPF04719TAFII28coord: 95..188
e-value: 5.6E-18
score: 64.8
IPR009072Histone-foldGENE3D1.10.20.10coord: 98..199
e-value: 6.8E-17
score: 63.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 99..197
NoneNo IPR availablePANTHERPTHR13218:SF8TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11coord: 95..202
NoneNo IPR availablePANTHERPTHR13218FAMILY NOT NAMEDcoord: 95..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:383781..389313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2186.1mRNA_F-serratus_M_contig13.2186.1Fucus serratus malemRNAF-serratus_M_contig13 383736..389532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig13.2186.1 ID=prot_F-serratus_M_contig13.2186.1|Name=mRNA_F-serratus_M_contig13.2186.1|organism=Fucus serratus male|type=polypeptide|length=233bp
MSNDGNILGTRKYPEVQPSSSTPVKSEPAVHNKEHPSGSAGADAGIGASA
IRSTAGHSLGINLLKRQRSGGIGGVAVGRTEGENVVVGSAGDVPVDKLEP
EQMKRYQAWKRSRLERSGVRELILDRAAPTLTRSLESGQGTGALKETSIL
VMSSMAKMYVGDLVEEAKRAQISRGESGPLKPKDLLDAREQLAISGTAPQ
LSSSSGRAPRVGGSARKSLLGGRSALMRRDAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006809TAFII28
IPR009072Histone-fold