prot_F-serratus_M_contig13.2185.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig13.2185.1
Unique Nameprot_F-serratus_M_contig13.2185.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length388
Homology
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BLAST of mRNA_F-serratus_M_contig13.2185.1 vs. uniprot
Match: A0A6H5KA41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA41_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 3.800e-53
Identity = 120/287 (41.81%), Postives = 164/287 (57.14%), Query Frame = 0 
Query:  111 GKTVVT-----KAIRAFGLALAWYFASSVAAFAVSGATG--LPYQPRPRRRIPIAPTIFLLYLMSDKKMKTRNRFAGVVPQDDQSRRRLADDAYDMALSWGKPAGRIALLAVDTFFFLIIFRFSGYDFSKLLAGRGMEQLRSLEFWIPYGAAATLGAAGVTRIIRRFGHGYLRSTIATLLAPIIRTVIIKPAKTVASLFGAGGDWDLGISDEERAVRRASSRQLRESLSTFQDVNFSDGDHDDG----SGSVAPPLGPGSSDGGNDSDEGEEGGGQDGDAPPSLKRT 386
            GK VV      K I++ G+ALAWY ASS  A A + ATG     +P+PR R    P + + Y +S   +K R R  GVVP+D +S + LADDA D+A+SWGKPAG +A  +VD   F  + R+ G+ F +L++ + +  L++ +FW+    A   G A VT   RR G GYLRS  A+ L+P +  ++++PAK VAS+ G G  WDLG++DE+R  RR S  +LR SLSTF+D +F    H DG    SG  A P  P                G D  APP LKR+
Sbjct:   97 GKAVVAPGRAKKVIKSAGVALAWYLASSAVALAATAATGGAARARPQPRMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGLMAYTSVDCIVFFFLSRWVGFPFKELVSAQRIAHLQTPDFWVATTLAGAFGFAIVTWT-RRVGQGYLRSVCASALSPAMHRLLVRPAKAVASVAGMGDGWDLGLTDEQRKARRPSI-ELRRSLSTFKDPDF----HGDGGIGDSGGAAFPQAPSP----------PPAAGVDDGAPPDLKRS 367
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KA41_9PHAE3.800e-5341.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 268..387
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 248..267
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..209
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..125
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 229..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..228
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.755
NoneNo IPR availableTMHMMTMhelixcoord: 154..168
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
NoneNo IPR availableTMHMMTMhelixcoord: 248..267
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:348222..358062 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2185.1mRNA_F-serratus_M_contig13.2185.1Fucus serratus malemRNAF-serratus_M_contig13 347202..358236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig13.2185.1 ID=prot_F-serratus_M_contig13.2185.1|Name=mRNA_F-serratus_M_contig13.2185.1|organism=Fucus serratus male|type=polypeptide|length=388bp
MTMKAAALSLAVLVVAGTLGTTTSFTAKPSSCRARHTCLSVHSASSSAAP
AVWRWASRARHGSCEVIPPPPALEDGPSCLEFASRGRANAYAPHAALKIV
EGSIEPQSLLGKTVVTKAIRAFGLALAWYFASSVAAFAVSGATGLPYQPR
PRRRIPIAPTIFLLYLMSDKKMKTRNRFAGVVPQDDQSRRRLADDAYDMA
LSWGKPAGRIALLAVDTFFFLIIFRFSGYDFSKLLAGRGMEQLRSLEFWI
PYGAAATLGAAGVTRIIRRFGHGYLRSTIATLLAPIIRTVIIKPAKTVAS
LFGAGGDWDLGISDEERAVRRASSRQLRESLSTFQDVNFSDGDHDDGSGS
VAPPLGPGSSDGGNDSDEGEEGGGQDGDAPPSLKRTV*
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