prot_F-serratus_M_contig13.2180.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig13.2180.1
Unique Nameprot_F-serratus_M_contig13.2180.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1100
Homology
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BLAST of mRNA_F-serratus_M_contig13.2180.1 vs. uniprot
Match: A0A6H5LE45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE45_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 5.870e-19
Identity = 132/341 (38.71%), Postives = 158/341 (46.33%), Query Frame = 0 
Query:  313 PPQRAMHRGVSAPRLYPSIQDDHI-------SG----GXXXXXXXPGGQRP-FGTGLSVEELKAMTKQRLEQQQG---------------RSSPSFPGR--------SSXXXXXXXXXXXXXXXXXXXXXXXXWRRSGSAGSAAMMDEHSRGMRDDGTSVPPAPFRRASSQ-----------QTRGMLQLDHGRRVYGGS-GRMEMMALTLEDRMRTLPTETGAGG-----ISPRILSQPSSPCFSATSHSSSACT-SP--------------GGGRFHRDGRSGVGAGXXXXXXXXXXXSAYAHATHVPPPGFADNGPTAV----DGG-YQTVTLPLSGD 581
            PP+R + RG+SAPR+Y +  +D I       SG    G        GGQRP FGTGLSVE+LK +TK RL+QQ                 R SP+F GR        SSXXXXXXXXXXXXXX          WRRSGSA                      A FRRA+S            + +G   +   RR +G + GRME     LE+RMR + +ET  GG     +SPRILSQPSSPCFSA SHSSSAC  SP              G    H DGR G G                       PPGF  +G  ++    DG  + T++L LSGD
Sbjct:  308 PPERGIRRGISAPRMYATSPEDPIPAHGQGGSGCVPRGVGDGGAGGGGQRPVFGTGLSVEKLKELTKLRLQQQXXXXXXXXXXXXXXXXXRGSPTFTGRPLATSALGSSXXXXXXXXXXXXXXLGHHHNERAEWRRSGSAXXXXXXXXXX----XXXXXXXXASFRRANSLIAPRGGAVHGGEQQGGAPMHGSRRPFGSTNGRMEG-PFGLEERMRVMQSETARGGXXXXGVSPRILSQPSSPCFSAASHSSSACGGSPXXXXXXXXXXXHGSGFSYAHDDGRGGGGG----------------------PPGFPMDGRGSLRMDSDGAMHTTLSLRLSGD 621
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LE45_9PHAE5.870e-1938.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:133028..161362 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2180.1mRNA_F-serratus_M_contig13.2180.1Fucus serratus malemRNAF-serratus_M_contig13 128517..161415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig13.2180.1 ID=prot_F-serratus_M_contig13.2180.1|Name=mRNA_F-serratus_M_contig13.2180.1|organism=Fucus serratus male|type=polypeptide|length=1100bp
MDGPSGHLSREGSGGFTARHGRLGRALSSPETWLPQQSDNSSRYSNGFSS
SCYEDQHHNYRLSPQPSLTPPLTQSGGGGGRGAGGGASGGGGSSTSRNIS
VLHHQQQSTQHPHMGDRGNSHDQSHDLRDDVGGASRVGMSVQDLKHMTAM
RMGHPRSGGGDGGGGGGGAARGRGGGGSTGGAIGDLKGSALSSAGSPTPD
VLSNSSRHRKGLFNLSKAGQDTSPHPTPTSQQIMLRTSAPVRESRQEQQR
QQQQLHDLQSPPPSIALSRHSSAHAAVGGSPRYPHQQQQQQANGSRGQMQ
ARGSEIMPGHHQPPQRAMHRGVSAPRLYPSIQDDHISGGGGGGGGGPGGQ
RPFGTGLSVEELKAMTKQRLEQQQGRSSPSFPGRSSSSGGGLGNSIGSSN
GGGGGHERKEWRRSGSAGSAAMMDEHSRGMRDDGTSVPPAPFRRASSQQT
RGMLQLDHGRRVYGGSGRMEMMALTLEDRMRTLPTETGAGGISPRILSQP
SSPCFSATSHSSSACTSPGGGRFHRDGRSGVGAGGGGRYGGGGGGSAYAH
ATHVPPPGFADNGPTAVDGGYQTVTLPLSGDGGERGFWPSRNDGGNLGHG
FQNGDGSLHDARGGSGSGGGGGGGGSRRHMRSGSAGGNMAQPPGSRALRQ
HHSFEDDGSISGRFRGRNGVVGVGSSFQPATAVSVASRPVSMQAIGRPVS
ASLSPPGMVGGSISDNLSDPGNGNGSLLGVRTGLSRKTSYDDRKNPGWLD
LQDAHGSSVDFDDHRAPGLVRSTSRLSDLRISHTNYDYPPRPQSTGSVIG
ESSSTTMLSAVGSGTSSHPWVRFGANASASAPLSATEDATAMMCAEFALL
TPKSALQQQQRIGDSPMRMWPPSWGTVHDAGGSATTNAASLSDPAADPGG
LLGTEIGHHVRRGRSANDGNVGFGRAVGGSQGSRGGSEVSSPEGPQASKG
GEDVDERSTGSGGSGGGGQQGGVHAAFGALDAAAGHGGGGGREANVGRGG
FDGSFPDSADGDGDTGRNGGTEAQSYARSLLKPTCFFGEDLPNCEGMGLE
DDTSLSRGVGRGSQSGLASAAPEAGRKVTSAGPADGTALAVAMDNQLSF*
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