prot_F-serratus_M_contig1288.2130.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1288.2130.1
Unique Nameprot_F-serratus_M_contig1288.2130.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length140
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1288.2130.1 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 7.140e-53
Identity = 102/127 (80.31%), Postives = 111/127 (87.40%), Query Frame = 0 
Query:    1 MGHGSGSAQSQIDA---EDRAKQERSLRAEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQISEQVLKVEQYVKEGRNALLYINRCHDTDHVPSAKSLRSLEHTLIRVHNASNALQVMIRDHSRTQ 124
            +G GSG++  Q +A   E+RAKQ RS RAEELR IYQEDIHYFVQHGSSLLKKLHKTRPASQ SEQVLK+ QYVKEG NALLYINRCH+T HVPSA SL+SLEHTLIRVH ASNALQVMIRDHS+TQ
Sbjct:  298 VGGGSGTSTGQHEAALKEERAKQHRSRRAEELRTIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCHETGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQ 424
[Close]
BLAST of mRNA_F-serratus_M_contig1288.2130.1 vs. uniprot
Match: A0A835Z449_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z449_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.200e-16
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:   26 AEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQIS------EQVLKVEQYVKEGRNALLYINRCHDTDHVPSAKSLRSLEHTLIRVHNASNALQVMI 117
            AE+LR  Y+ DI  FVQ G S+L K H   P S  +      +Q+ K+ QYV+EG+NAL+Y+ RCH   HVPSA SL+SLE TL +VH AS  L+ M+
Sbjct:  447 AEQLRRRYEADIRAFVQQGRSVLLK-HDGSPRSMAAHGSGGADQIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMM 543
[Close]
BLAST of mRNA_F-serratus_M_contig1288.2130.1 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.170e-7
Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0 
Query:   63 QVLKVEQYVKEGRNALLYINRCHDTDHVPSAKSLRSLEHTLIRVHNASNALQVM 116
            +V K+ QY++EG+NAL+Y+ RCH   H+PS  SL SL  TL +VH AS AL+ M
Sbjct:   70 RVRKLVQYIREGQNALMYMERCHLQHHIPSGPSLESLHLTLQKVHKASLALRSM 123
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1288.2130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNQ0_9PHAE7.140e-5380.31KIX_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z449_9STRA2.200e-1650.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHY1_9STRA2.170e-753.70KIX_2 domain-containing protein n=1 Tax=Tribonema ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1288contigF-serratus_M_contig1288:107801..110512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1288.2130.1mRNA_F-serratus_M_contig1288.2130.1Fucus serratus malemRNAF-serratus_M_contig1288 107223..110512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1288.2130.1 ID=prot_F-serratus_M_contig1288.2130.1|Name=mRNA_F-serratus_M_contig1288.2130.1|organism=Fucus serratus male|type=polypeptide|length=140bp
MGHGSGSAQSQIDAEDRAKQERSLRAEELRNIYQEDIHYFVQHGSSLLKK
LHKTRPASQISEQVLKVEQYVKEGRNALLYINRCHDTDHVPSAKSLRSLE
HTLIRVHNASNALQVMIRDHSRTQQNNNPYGPGGGGGGSG
back to top