prot_F-serratus_M_contig1288.2126.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1288.2126.1
Unique Nameprot_F-serratus_M_contig1288.2126.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length104
Homology
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BLAST of mRNA_F-serratus_M_contig1288.2126.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 2.040e-33
Identity = 69/102 (67.65%), Postives = 75/102 (73.53%), Query Frame = 0 
Query:    9 PTARYFREPTHHDKADLDQVCRELRRVHLEGERK------ELCGVVADTGTGRDRCVLNRLLAMYPSQSTGGGGSGASGVALLSALEPMAVTPDVMDYRHSW 104
            PTARYF EPTHH+ A LD+VC ELRRV++   R       E  G   D G GRDRCVL  LLAMYPS+  GGG  GASGV+LLSALEPMAVTPDVMDYRHSW
Sbjct: 1827 PTARYFLEPTHHESAHLDKVCTELRRVYMPPPRPPAGLSLEKSGG-EDRGYGRDRCVLRCLLAMYPSRKAGGGVGGASGVSLLSALEPMAVTPDVMDYRHSW 1927
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1288.2126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9B1_9PHAE2.040e-3367.65Peptidase S59 domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021967Nuclear protein 96PFAMPF12110Nup96coord: 7..104
e-value: 2.0E-7
score: 30.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1288contigF-serratus_M_contig1288:2388..2699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1288.2126.1mRNA_F-serratus_M_contig1288.2126.1Fucus serratus malemRNAF-serratus_M_contig1288 2388..2700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1288.2126.1 ID=prot_F-serratus_M_contig1288.2126.1|Name=mRNA_F-serratus_M_contig1288.2126.1|organism=Fucus serratus male|type=polypeptide|length=104bp
GGRQRGNSPTARYFREPTHHDKADLDQVCRELRRVHLEGERKELCGVVAD
TGTGRDRCVLNRLLAMYPSQSTGGGGSGASGVALLSALEPMAVTPDVMDY
RHSW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021967Nup96