prot_F-serratus_M_contig1288.2125.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1288.2125.1
Unique Nameprot_F-serratus_M_contig1288.2125.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length255
Homology
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BLAST of mRNA_F-serratus_M_contig1288.2125.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 5.270e-75
Identity = 152/256 (59.38%), Postives = 172/256 (67.19%), Query Frame = 0 
Query:    8 PRWELPRRRNDKPDNYADLVKCMHGYAAAHAAAGAQCLHSSGGPYRGGGSSAGSGGNSSEDGPEWVLEQAWRLASAMWGQEEGEGKVQDLPVPGDVLTAASGFGSVGENDEASPAARREAAVAEWLANAVASCVPTGEWSAAAASAEAS------EEGRGTWRRVLELLSVRRVENAAEVAMDAGLPRLAVVLAA-ATQGIG--RPVRNGASRFLAQQVTLWQGNGADAFMPQEAFVVYQLLGREGFRDVGLRGVI 254
            PRW LPRRRND+P NY  LV+C+HGY   H  AGA              SS+   G ++ED PEWVLEQ+WRLASAMWGQEEGEG+VQDLP+PGD+  AA      G+ D  SPAARREAAV +WLA AV+SCVP+     +             +  R TWRRVLELLSVRRV +AA  AM AGLPRLAV+L A ATQG G  RP     S+FLAQQ   WQ  GADA MPQEAF V QLLGREGFRDVGLRG+I
Sbjct: 1517 PRWALPRRRNDRPQNYDTLVRCIHGYVEVHRLAGAAAT-----------SSSREAGAATEDSPEWVLEQSWRLASAMWGQEEGEGRVQDLPLPGDLQRAAD-LTLAGDCDGGSPAARREAAVGDWLARAVSSCVPSPSGGPSXXXXXXXXXXXXXDADRETWRRVLELLSVRRVHDAAVAAMAAGLPRLAVMLTAVATQGGGGGRPPARYGSKFLAQQAAQWQAAGADARMPQEAFSVVQLLGREGFRDVGLRGLI 1760
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1288.2125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9B1_9PHAE5.270e-7559.38Peptidase S59 domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021967Nuclear protein 96PFAMPF12110Nup96coord: 165..241
e-value: 2.2E-14
score: 53.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1288contigF-serratus_M_contig1288:1490..2254 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1288.2125.1mRNA_F-serratus_M_contig1288.2125.1Fucus serratus malemRNAF-serratus_M_contig1288 1490..2256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1288.2125.1 ID=prot_F-serratus_M_contig1288.2125.1|Name=mRNA_F-serratus_M_contig1288.2125.1|organism=Fucus serratus male|type=polypeptide|length=255bp
RLDGCNVPRWELPRRRNDKPDNYADLVKCMHGYAAAHAAAGAQCLHSSGG
PYRGGGSSAGSGGNSSEDGPEWVLEQAWRLASAMWGQEEGEGKVQDLPVP
GDVLTAASGFGSVGENDEASPAARREAAVAEWLANAVASCVPTGEWSAAA
ASAEASEEGRGTWRRVLELLSVRRVENAAEVAMDAGLPRLAVVLAAATQG
IGRPVRNGASRFLAQQVTLWQGNGADAFMPQEAFVVYQLLGREGFRDVGL
RGVIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021967Nup96