prot_F-serratus_M_contig128.2078.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig128.2078.1
Unique Nameprot_F-serratus_M_contig128.2078.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1009
Homology
BLAST of mRNA_F-serratus_M_contig128.2078.1 vs. uniprot
Match: A0A6H5K749_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K749_9PHAE)

HSP 1 Score: 400 bits (1029), Expect = 5.540e-119
Identity = 399/1145 (34.85%), Postives = 516/1145 (45.07%), Query Frame = 0
Query:   10 WPRAAVFALGIAGGSLSG-SPPHLPRGWTVHYHQGTPYFYNEFTGETTWVQPV-PTFPPPEESRNEELSSGGWPR------RDQPRERSSIPEENSA--------------GVGIPTGKRGWFGF-----GKGTTKRQQQDVEGQRSPPRLWENRGTTVSP---TSTSEYGSPEGRGGRGSPQQRVGEGRSVGADIQFGDERAP------------------------AYDPRREEPGSVASIWGD---GGGGGTTEPW--GVLDEFSV-----PGVEAQPL--------------------VPPEDPGTGTHEGTQQ---GGLTEAEGRDARVRPDVAPVAFGLDPVSDNTEAP----FSQSDGHGDWPTGASRNGDPEVWVDDIRGA-GAPVLDDKNAGMGTGQGGTTDAEGAIARAHNQGKKTDDSTEEGTQATMTHQPETATAEAGGEGEPTPSHAAPNILATEEKTTGTSEGFSPPPPTDSLLDDVASSLWGKDVIGPDVFVGRQQGNDNTVPAGERDLDADASQASYAPPSRAVGAYTAIGAWSAGETDATPGQQEE---------DGKATRQDAEWWDWADPWGQMAVWGAPAF--GTDHNDAV-------PTPDALPKGDVH----LPAQPPGGNEGASGW---------------KVVSGQIEVGVQCTETSTLGDPDAVTVASRRQELEELAQALTEKRKELED--AREVEEALRSALREQEEARASAAVXXXXXXXXXXXXXXLMKQRAEEAKENATAVGQWLMTLGLEQQNLKDQLAAAQSSSTLLTKELEDLREVSRKAEHRASSSEAKLKVALEDVAVLDEGLKQYMDGEGQ--QISLRPSSTIWRRVSEAYLRPLLPSKLKTPSPEELEAVQLNRSLGRAQENNTALAEAVRSKDDLVKDLNSRIKQFQLQAVRRKKGYHALKLGLADLTREVKAKESMVIIMVVAMVRAGLILDQMSAAIRAQREALESLASLSRDSQENVDSLSLEVEQGTTCLAQLQESLHKADSAMCAIANSLGAGEGCVQRWKDAT----------DQEMGENMSKDS-LMELVREIQAAATNKFVNPLGLEPTTGAITVAVPRTVSGQTD--------IHGVVRRQKT---FWGRLVDVICCRR 999
            WPRAA  AL +AGG LSG +PP +P GWTVH+ Q TPYFYNE TGETTW QP   T   P  +     +S   P        ++PR  SS   + S+                         FG                           W++RG T +        E    + +G R       G G   G       ER P                        A + R E P   A  WGD      GG +EP   G    F       P V+A P                       PEDP     +G +    GG  EA     R   D      G+  ++ +T +      ++    GD   G S  G      D + GA GA     + A  GT +    +              TD+                                    L ++E  T      S  PP     D     L G    GP  +VG   G+     AG  D  + ++ A               G W +G    +P Q            DG     DA+W DWADPWGQ A WGAP +  G +    +       P P  + K ++     + + P G     SGW               KV +G                                               AR+V+  LR+AL+++EE +A+A     XXXXX         ++AE AKENATA GQWL++LGLE++ LK QLAAAQ++ST L +EL  L+E + +AE RA+SSE KL++A+ED+ VLDEGLK +MDG+GQ  Q S R     WRRVS+AYLRPLLPSKLK P+PEELEA++LNRSLGRA ENNTALAEAV SKDDLVK+LNSRIKQFQL AVRRKKGY ALKLGLA+LT EV+AKE+M+ I+ V M+    IL+ M A++ AQR  +  +A + RD +E V+ L++EVE GT CL  LQ SLHK +SA+ A+A SLGA E CVQRWKDA            +E G++   +  L +L+ EI AAA   FV+PLGLEP+TGAIT+AVPR + G+             V R  K+   FW  + D++ CRR
Sbjct:   12 WPRAAALALSLAGGCLSGVAPPSVPPGWTVHFQQDTPYFYNEKTGETTWEQPRRTTTADPATAVAPSAASAATPGYLAAAGTNEPRSPSSSHRDFSSQPXXXXXXXXXXXXXXXXXXXXXXXFGLRXXXXXXXXXXXXXXXXXXXXXXXXXWQSRGATPAGGRGALREERSQEQWQGARDRGWSHSGRG---GXXXXXRHERLPDDPQAFXXXXXXXXXXXXXXXXXGASNERWEGP--QAKGWGDEEESAAGGCSEPSRAGSSSSFGAGGLAGPAVQAPPTGVGPEGGVAGXXXXXXXXXXXAPEDPSGAQSDGVEGDVGGGALEATDEQQRRAGDQDQWWTGVSVIAPSTASAGAGRIAELGTTGDGLAGQSEGGGRIGKHDGVLGAAGAGADQARLAASGTDEIIAAEKXXXXXXXXXXXXXTDEW----------------------------------FLVSQEPQTREEHPASSSPPAWEGHDGDEGVLPGGG--GPAGYVGTATGSTG---AGGTDGQSPSTMAQKR------------GLWGSG----SPSQHXXXXXXXXYGYDGMG-HGDADW-DWADPWGQGASWGAPGWAPGAERTQEIQPGGSPPPAPSPIFKEELDGGHPIGSVPDGTGVAGSGWGRHHSGGGERPGVASKVAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARQVQAELRAALKKEEEGKAAALAAATXXXXXTEKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSETKLRMAMEDIEVLDEGLKLFMDGDGQPRQQSSRAGPLSWRRVSDAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKETMMTILTVCMLGTSSILEGMYASLEAQRANIAEIAEVLRDREERVEELTVEVENGTACLTDLQTSLHKTESALSAVAVSLGAEEECVQRWKDAVAAAALGRATPGEEPGDDDDGEGPLGQLLHEIHAAAAKTFVSPLGLEPSTGAITIAVPRPLDGEAGGXXXXXXXXXXVDRGTKSPGGFWAGVFDLLFCRR 1094          
BLAST of mRNA_F-serratus_M_contig128.2078.1 vs. uniprot
Match: D7FUP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP1_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 2.020e-86
Identity = 206/420 (49.05%), Postives = 254/420 (60.48%), Query Frame = 0
Query:  492 WDWADPWGQMAVWGAPAFGTDHNDAVPTPDALPKGDVH----------------LPAQPPGGNEGASGW--KVVSGQIEVGVQCTETS--TLG-----DPDAVTVASRRQE--LEELAQALTEKRKELEDAREVEEALR------------------------SALREQEEARASAAVXXXXXXXXXXXXXXLMKQRAEEAKENATAVGQWLMTLGLEQQNLKDQLAAAQSSSTLLTKELEDLREVSRKAEHRASSSEAKLKVALEDVAVLDEGLKQYMDGEGQ--QISLRPSSTIWRRVSEAYLRPLLPSKLKTPSPEELEAVQLNRSLGRAQENNTALAEAVRSKDDLVKDLNSRIKQFQLQAVRRKKGYHALKLGLADLTREVKAKESMVIIMVVAMVRAGLILDQMSAAIRAQREA 858
            WDWADPWGQ A WGAP +      A  TP++ P G                   + + P G     SGW      G    GV  T  +   LG       DA    + R E  + ELA+A       LE+AR+V+  LR                        +AL+E+EE +A+A                   ++AE AKENATA GQWL++LGLE++ LK QLAAAQ++ST L +EL  L+E + +AE RA+SSEAKL++A+ED+ VLDEGLK +MDG+GQ  Q S R     WRRVSEAYLRPLLPSKLK P+PEELEA++LNRSLGRA ENNTALAEAV SKDDLVK+LNSRIKQFQL AVRRKKGY ALKLGLA+LT EV+AKE+M+ I+ V M+    IL+ M A + AQ EA
Sbjct:    8 WDWADPWGQGASWGAPGWAPG---AERTPESQPGGSPPPAPSHTSKEELDGGHPIGSVPDGAGVAGSGWGRHHSGGGERPGVAPTVAAGAALGAGGEATADAAEKGATRNEGGVTELARAXXXXXXXLEEARKVQAELRQPTRRALPASRAPWFVRSVVPGKRTALKEEEEGKAAALAAATAAEEKTEKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSEAKLRMAMEDIEVLDEGLKLFMDGDGQPRQQSSRAGPLSWRRVSEAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKETMMTILTVCMLGTSSILEGMDATLDAQAEA 424          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K749_9PHAE5.540e-11934.85WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FUP1_ECTSI2.020e-8649.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 568..615
NoneNo IPR availableCOILSCoilCoilcoord: 680..700
NoneNo IPR availableCOILSCoilCoilcoord: 624..644
NoneNo IPR availableGENE3D2.20.70.10coord: 29..64
e-value: 2.6E-6
score: 28.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..1008
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.496
IPR001202WW domainSMARTSM00456ww_5coord: 31..62
e-value: 1.7E-4
score: 31.0
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 36..60
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 30..62
score: 11.743
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 28..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig128contigF-serratus_M_contig128:519860..538295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig128.2078.1mRNA_F-serratus_M_contig128.2078.1Fucus serratus malemRNAF-serratus_M_contig128 519815..538820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig128.2078.1 ID=prot_F-serratus_M_contig128.2078.1|Name=mRNA_F-serratus_M_contig128.2078.1|organism=Fucus serratus male|type=polypeptide|length=1009bp
MTGCYRRPRWPRAAVFALGIAGGSLSGSPPHLPRGWTVHYHQGTPYFYNE
FTGETTWVQPVPTFPPPEESRNEELSSGGWPRRDQPRERSSIPEENSAGV
GIPTGKRGWFGFGKGTTKRQQQDVEGQRSPPRLWENRGTTVSPTSTSEYG
SPEGRGGRGSPQQRVGEGRSVGADIQFGDERAPAYDPRREEPGSVASIWG
DGGGGGTTEPWGVLDEFSVPGVEAQPLVPPEDPGTGTHEGTQQGGLTEAE
GRDARVRPDVAPVAFGLDPVSDNTEAPFSQSDGHGDWPTGASRNGDPEVW
VDDIRGAGAPVLDDKNAGMGTGQGGTTDAEGAIARAHNQGKKTDDSTEEG
TQATMTHQPETATAEAGGEGEPTPSHAAPNILATEEKTTGTSEGFSPPPP
TDSLLDDVASSLWGKDVIGPDVFVGRQQGNDNTVPAGERDLDADASQASY
APPSRAVGAYTAIGAWSAGETDATPGQQEEDGKATRQDAEWWDWADPWGQ
MAVWGAPAFGTDHNDAVPTPDALPKGDVHLPAQPPGGNEGASGWKVVSGQ
IEVGVQCTETSTLGDPDAVTVASRRQELEELAQALTEKRKELEDAREVEE
ALRSALREQEEARASAAVAAVAAAEKAEAAEALMKQRAEEAKENATAVGQ
WLMTLGLEQQNLKDQLAAAQSSSTLLTKELEDLREVSRKAEHRASSSEAK
LKVALEDVAVLDEGLKQYMDGEGQQISLRPSSTIWRRVSEAYLRPLLPSK
LKTPSPEELEAVQLNRSLGRAQENNTALAEAVRSKDDLVKDLNSRIKQFQ
LQAVRRKKGYHALKLGLADLTREVKAKESMVIIMVVAMVRAGLILDQMSA
AIRAQREALESLASLSRDSQENVDSLSLEVEQGTTCLAQLQESLHKADSA
MCAIANSLGAGEGCVQRWKDATDQEMGENMSKDSLMELVREIQAAATNKF
VNPLGLEPTTGAITVAVPRTVSGQTDIHGVVRRQKTFWGRLVDVICCRRH
VEDRQNDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf