prot_F-serratus_M_contig1279.2059.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1279.2059.1
Unique Nameprot_F-serratus_M_contig1279.2059.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length710
Homology
BLAST of mRNA_F-serratus_M_contig1279.2059.1 vs. uniprot
Match: A0A6H5KNI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI2_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 3.850e-80
Identity = 152/306 (49.67%), Postives = 197/306 (64.38%), Query Frame = 0
Query:  417 PVVVMPPEEMKPLAPDGWGP----ETTQQQGSD--WQKAAITVLNRLKRRETLLNDDFLSKYPELDINLTKEFSLPPTEMAEYRALVGEPMVLSTVEHRVRNTH----LLKCPQHFVNECLRIFTNGIVWWGQDRFKSDQFAGDVILICQHLRAVFRWHCLETLPLWVWSGKDGKDPPXXXXXXSTEEEWEAEHLRPCPLTPVEQKRARLLREEKVSSMKMTEGRSLASYVLRQMKKKDTKAIYCRRYLAGVVYYHRAEVDLTLFPDYLEVCPRLIDMSTVERKLG--RPDDSNREYLFHREFIQD 710
            PV    P E     P GWGP    E   + G++  W K A  V+ RL++++ L ND+FL +YPELD+NLTK+F L   EM EYR LVGEPM L  VE R+++        K PQHFVNE +R FTNGIVWW Q+R++  ++A DV+ +C+H+R  FRWHCLE LPLW W GKDG++PP      +T+EEWEAE +RPCPLT  EQKR RL+RE  V+  K+TEGRS A  +LR M KKD+             ++   EVDLTL PDYL +CPR + +S VE+ +G  + ++  REYL H EFI D
Sbjct: 2088 PVPPPRPREQDKKPPAGWGPGWGAEAEMRPGTEQKWVKEAEIVMKRLRKKDQLTNDEFLLRYPELDMNLTKKFVLGDEEMEEYRTLVGEPMNLELVEKRLQHPKDCGGPYKNPQHFVNEAMRTFTNGIVWWTQERYQGVEYANDVVRVCKHVRRTFRWHCLEVLPLWKWGGKDGEEPPPPDPLPTTKEEWEAEDMRPCPLTWREQKRERLIREASVAKTKLTEGRSHACALLRSMMKKDSH------------FFFTPEVDLTLIPDYLGICPRPMSLSRVEKLIGGTKEEEKEREYLTHSEFISD 2381          
BLAST of mRNA_F-serratus_M_contig1279.2059.1 vs. uniprot
Match: D7FWI3_ECTSI (Global transcription factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI3_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 8.800e-80
Identity = 146/286 (51.05%), Postives = 192/286 (67.13%), Query Frame = 0
Query:  433 GWGPETTQQQGSD--WQKAAITVLNRLKRRETLLNDDFLSKYPELDINLTKEFSLPPTEMAEYRALVGEPMVLSTVEHRVRNTH----LLKCPQHFVNECLRIFTNGIVWWGQDRFKSDQFAGDVILICQHLRAVFRWHCLETLPLWVWSGKDGKDPPXXXXXXSTEEEWEAEHLRPCPLTPVEQKRARLLREEKVSSMKMTEGRSLASYVLRQMKKKDTKAIYCRRYLAGVVYYHRAEVDLTLFPDYLEVCPRLIDMSTVERKLG--RPDDSNREYLFHREFIQD 710
            GWG E   + G++  W K A  V+ RL++++ L ND+FL +YPELD+NLTK+F L   EM EYRALVGEPM L  VE R+++        K PQHFVNE +R FTNGIVWW Q+R++  ++A DV+ +C+H+R  FRWHCLE LPLW W+GKDG++PP       T+EEWEAE +RPCPLT  EQKR RL+RE  V+  K+TEGRS A  +LR M KKD+             ++   EVDLTL PDYL +CPR + +S VE+ +G  + ++  REYL H EF+ D
Sbjct: 1407 GWGAEAEMRPGTEQKWVKEAEIVMKRLRKKDQLTNDEFLLRYPELDMNLTKKFVLGDEEMEEYRALVGEPMNLELVEKRLQHPKDCGGPYKNPQHFVNEAMRTFTNGIVWWTQERYQGVEYANDVVRVCKHVRRTFRWHCLEVLPLWKWAGKDGEEPPPPDPLPITKEEWEAEDMRPCPLTWREQKRERLIREASVAETKLTEGRSHACALLRSMMKKDSH------------FFFTPEVDLTLIPDYLGICPRPMSLSRVEKLIGGTKEEEKEREYLTHSEFMSD 1680          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1279.2059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNI2_9PHAE3.850e-8049.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWI3_ECTSI8.800e-8051.05Global transcription factor group n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 437..571
e-value: 6.9E-6
score: 27.7
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 446..540
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 666..710
score: 9.076

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1279contigF-serratus_M_contig1279:237737..241002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1279.2059.1mRNA_F-serratus_M_contig1279.2059.1Fucus serratus malemRNAF-serratus_M_contig1279 237735..241002 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1279.2059.1 ID=prot_F-serratus_M_contig1279.2059.1|Name=mRNA_F-serratus_M_contig1279.2059.1|organism=Fucus serratus male|type=polypeptide|length=710bp
PLDDLDWKCIAPRLSLKIKASPKTKSTWPEKTKSAPPMKLKAVSPAKKKG
ASPWKVKGASPTKVKVAPPKKKQKRATGELDGQTDSTDATTSATKDPVPS
KSKAQLVTPSGGFAALPGKGTTAEEWSTRVPSSKQRKSSGKAGKGSAGGG
DGGGGSDAVIWSSASKSRPVSQFRSSTGPAASGAKKASRVPTKRPVIALP
EPGAVELPKVESPEAGEVVLCKMAGGKASKGKKAAGSKPKKRGGSKATPQ
SQESGTKDSTIRAKPPRTNDSADKPRLTLKFNAQLVRSVSAKSMPTPPVA
SSSSNPLLRLPSATTAPAASFSSVTWPAVKPEKPSKPASKPATTTPPGFS
KSKATKKSAPKTVKTVEPSLPPSSPPAVSLSLVPPRKSGEGVGRGKGKRG
KNPKGDSPKAPLEKETPVVVMPPEEMKPLAPDGWGPETTQQQGSDWQKAA
ITVLNRLKRRETLLNDDFLSKYPELDINLTKEFSLPPTEMAEYRALVGEP
MVLSTVEHRVRNTHLLKCPQHFVNECLRIFTNGIVWWGQDRFKSDQFAGD
VILICQHLRAVFRWHCLETLPLWVWSGKDGKDPPPPDPAPSTEEEWEAEH
LRPCPLTPVEQKRARLLREEKVSSMKMTEGRSLASYVLRQMKKKDTKAIY
CRRYLAGVVYYHRAEVDLTLFPDYLEVCPRLIDMSTVERKLGRPDDSNRE
YLFHREFIQD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR001487Bromodomain