prot_F-serratus_M_contig1276.2040.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1276.2040.1
Unique Nameprot_F-serratus_M_contig1276.2040.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length90
Homology
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BLAST of mRNA_F-serratus_M_contig1276.2040.1 vs. uniprot
Match: UPI0010307233 (GIY-YIG nuclease family protein n=1 Tax=Rhizobium leguminosarum TaxID=384 RepID=UPI0010307233)

HSP 1 Score: 52.0 bits (123), Expect = 1.060e-5
Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = 0 
Query:    1 IYAIVNLKNGRAYVGRTIRSPFLRFQEHVMHDTTHFG----RALRHN-HNGFVVLLLEKVPDGTGLQEYRERESSWISRLDSLH-SGYNK 84
            IY I +   G+ YVG T+  P +RF +H +      G     A+R N    F + LLE V  G GL    ERES WI+ L++LH  G NK
Sbjct:  213 IYRITDGSTGKCYVGLTVNKPEMRFGQHKIFANKGRGSLLHEAMRKNGFENFSIDLLEVVEGGEGL--LAERESHWITLLETLHPKGLNK 300
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1276.2040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00103072331.060e-540.00GIY-YIG nuclease family protein n=1 Tax=Rhizobium ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000305GIY-YIG endonucleasePFAMPF01541GIY-YIGcoord: 1..83
e-value: 3.3E-8
score: 33.7
IPR000305GIY-YIG endonucleasePROSITEPS50164GIY_YIGcoord: 1..84
score: 11.584
IPR035901GIY-YIG endonuclease superfamilyGENE3D3.40.1440.10coord: 1..88
e-value: 5.3E-9
score: 38.2
IPR035901GIY-YIG endonuclease superfamilySUPERFAMILY82771GIY-YIG endonucleasecoord: 1..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1276contigF-serratus_M_contig1276:186933..187202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1276.2040.1mRNA_F-serratus_M_contig1276.2040.1Fucus serratus malemRNAF-serratus_M_contig1276 186933..187202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1276.2040.1 ID=prot_F-serratus_M_contig1276.2040.1|Name=mRNA_F-serratus_M_contig1276.2040.1|organism=Fucus serratus male|type=polypeptide|length=90bp
IYAIVNLKNGRAYVGRTIRSPFLRFQEHVMHDTTHFGRALRHNHNGFVVL
LLEKVPDGTGLQEYRERESSWISRLDSLHSGYNKRREIAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000305GIY-YIG_endonuc
IPR035901GIY-YIG_endonuc_sf