prot_F-serratus_M_contig1273.2028.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1273.2028.1
Unique Nameprot_F-serratus_M_contig1273.2028.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length270
Homology
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 3.460e-43
Identity = 100/214 (46.73%), Postives = 142/214 (66.36%), Query Frame = 0
Query:   53 MEKAKATVKNICTKLGQPWDGKRKDSP-LSLELLTEKARVKVARLRQQRETLKDSGRANSKAQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRD 265
            +EKA   + N+  K G  WDG R +S  L++E L  K  V+V+R R ++E  K   R+ +K +V+ QL +A  L+K+K  L+D L   ME++  ER +R  +W  +R+++A +TSR F  +L++ GASG   F +  + + LT+ ++   N  QC+D KLLSGGE S ATLALLLALG+  + PFRVMDEFDVFMDA  RNIAIKQ++ FA+RD
Sbjct: 1006 LEKANLYMTNMRAKDGLEWDGVRVESRGLTVEQLEHK--VQVSRKRYEKEREKRCKRSKTKEEVESQLLQAYNLFKEKEKLADTLEGNMEMLSNERNQRTRRWRQMRDFVARQTSRLFDAYLQEKGASGEVRFDNECQTLGLTYQKDSSDNASQCSDVKLLSGGERSFATLALLLALGQSHECPFRVMDEFDVFMDAMSRNIAIKQVIEFAKRD 1217          
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 4.480e-27
Identity = 85/242 (35.12%), Postives = 136/242 (56.20%), Query Frame = 0
Query:   24 VDKLVRETKNLEQLKINSKEAEDRLKDVVMEKAKATVKNICTKLGQPWDGKRKDSPLSLELLTEKARVKVARLRQQRETLKDSGRANSKAQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRD 265
            V+K+ +E ++L Q    +KE  ++  +  M+ AK+ +    ++   PWDG+R D P    +   +A++K A  R   + +K +    +KA V E+L +            +KL   M+++  ERL+R  KW   R+ +   T+R F   L +  A G   F+H+++ + L++      +  +C D + LSGGE S ATLALLL+LG H D PFRVMDEFDVFMDA  R+ AI +++ FA+R+
Sbjct:  883 VEKVEKELEHLAQ----TKEEAEKSVETAMDSAKSFMAK--SRRQPPWDGRRADDPGKRTVEALRAKLKQAEERYFNDPIKINMGNRTKAMVVEELIQEESTRGDMGWAINKLDSNMKMLSDERLKRREKWKTFRDVIPTWTARMFGDILAEKEAHGEVKFNHKKKTLGLSYQSQAHNDTSKCRDVRQLSGGEKSYATLALLLSLGAHHDCPFRVMDEFDVFMDAVSRDHAILEVLKFAKRN 1118          
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A7S3UWL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL6_HETAK)

HSP 1 Score: 102 bits (255), Expect = 1.260e-22
Identity = 69/186 (37.10%), Postives = 104/186 (55.91%), Query Frame = 0
Query:   81 SLELLTEKARVKVARLRQQRETLKDSGRANSKAQVKEQLAEAVRLYKQKRD-LSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRD 265
            S E + +  R +  +L+Q+RE  + + +  SK + + Q   A   Y+ K D L  K    M L + +  ER  K+ A   +    T+  F ++L+Q G+SG  HF+  E+ +Q+   ++      Q  D K LSGGE S  TLALLLALG +I+ PFRVMDEFD+FMDA  R +A++Q++     D
Sbjct:   17 SKEQIEKLIRRRTEQLKQKRE--QQALQRKSKQECETQYLRAKAKYRDKEDELKTKWTNAMALQK-DIAERMDKYKAFSKFFRRSTNHMFDEYLQQRGSSGGIHFNSNEKTLQIVVQKDNMDEATQTTDIKALSGGERSATTLALLLALGANIECPFRVMDEFDIFMDAMARKLAMQQVIEHGMAD 199          
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A7S2DFF7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFF7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 5.290e-20
Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 0
Query:  138 ETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIM 259
            E + L++ +  ER  +W  LR ++AN+T+  F Q+L++ G SG  +F+H EE +  T   N   +  Q     L SGGE S  T+ALLL+LGE I+ PFR+MDEFDVFMDA  R  A++ ++
Sbjct:  340 ENINLLQADLKERKSRWKDLRRFIANQTNMFFDQYLQKNGKSGRVNFNHNEETMTFTVCMNNQDSQTQSEVTSLFSGGERSYVTMALLLSLGECIECPFRIMDEFDVFMDAISRRKAMENLV 461          
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A7S2W981_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W981_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.620e-20
Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 0
Query:  140 MELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSR-NGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFA 262
            ++LM  +  +R   W   R+++AN T+  F Q L + G+SG   F H  + + LT  + N D N  Q  D K LSGGE S  TL+LLLALGE++++PFRVMDEFDVF+D   R IA++ ++  A
Sbjct:  131 IDLMIADVKQRQRTWRKFRSHIANMTNETFDQMLNKKGSSGEIAFDHSAKTLNLTVQKDNTDRNMSQTKDVKALSGGERSFVTLSLLLALGENLETPFRVMDEFDVFLDPMSRKIALETMIHVA 254          
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A225W8L5_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8L5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.120e-19
Identity = 62/157 (39.49%), Postives = 92/157 (58.60%), Query Frame = 0
Query:  113 AQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRN--GDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRDGK 267
            A++K+ +      YK K+   DK  E +E +R    ER   W  LR  +AN TS  F +++     +G   F H ++R+++   +N  G +   Q  D K LSGGE S   ++LLLALGE I+ PFRVMDEFDVFMD+  R++ I+ ++  A++DGK
Sbjct:  921 AELKDDMDAKKLKYKNKKTNFDKFRENLERIRSMLEERKRVWQILRKEIANRTSVEFNKYMCLNNFAGKLRFRHDDQRLEIAVLQNEVGASRASQVTDMKELSGGERSYTQVSLLLALGESIECPFRVMDEFDVFMDSVNRDMTIQLLVKAAKKDGK 1077          
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A7R9VE37_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VE37_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.110e-19
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 0
Query:  153 KWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFA 262
            +W   R Y+   T+ +F Q L + G++G   F H  + + L   ++      Q  D K LSGGE S  TLALLLALGE +++PFRVMDEFDVF+D   R IA+  +++ A
Sbjct:   17 RWREFRGYLVETTNISFDQMLNKKGSAGQLDFDHENQTLNLIVQKDNSNEMSQTKDVKALSGGERSFTTLALLLALGESLETPFRVMDEFDVFLDPVARKIALDNMVSAA 126          
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: W2R5D0_PHYPN (SMC_N domain-containing protein n=24 Tax=Phytophthora TaxID=4783 RepID=W2R5D0_PHYPN)

HSP 1 Score: 96.3 bits (238), Expect = 9.420e-19
Identity = 59/157 (37.58%), Postives = 91/157 (57.96%), Query Frame = 0
Query:  113 AQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRN--GDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRDGK 267
            A++++ L      Y+ K+   DK  + +E +R    ER   W  LR  +A+ TS  F + +E    +G   F H ++R+++   +N  G +   Q  D K LSGGE S   ++LLLALGE I+ PFRVMDEFDVFMD+  R++ I+ ++  A++D K
Sbjct:  938 AELRDDLEAKKLKYRNKKKNFDKFRDNLERIRAMLEERKRVWQILRKEIAHRTSMGFNRFMELNNFAGKLRFRHDDQRLEIAVLQNEVGASRASQVTDMKELSGGERSYTQVSLLLALGESIECPFRVMDEFDVFMDSVNRDMTIQLLVDAAKKDSK 1094          
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A8J5J7T2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J7T2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.040e-18
Identity = 59/157 (37.58%), Postives = 92/157 (58.60%), Query Frame = 0
Query:  113 AQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRN--GDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRDGK 267
            A++++ L      Y+ K+   DK  + +E +R    ER   W  LR  +A+ TS  F +++     +G   F H ++R+++   +N  G +   Q  D K LSGGE S   ++LLLALGE I+ PFRVMDEFDVFMD+  R++ I+ ++  A++DGK
Sbjct: 2007 AELRDDLESKKLKYRSKKKNFDKFRDNLECIRTMLEERKRVWQILRKEIAHRTSMEFNKYMCLNNFAGKLKFRHDDQRLEIAVLQNEVGASRASQVTDMKELSGGERSYTQVSLLLALGESIECPFRVMDEFDVFMDSVNRDMTIQLLVDAAKKDGK 2163          
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: G5A786_PHYSP (SMC_N domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A786_PHYSP)

HSP 1 Score: 90.1 bits (222), Expect = 1.180e-18
Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 0
Query:  149 ERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRN--GDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRDGK 267
            ER   W  LR  +A+ TS  F +++     +G   F H ++R+++   +N  G +   Q  D K LSGGE S   ++LLLALGE I+ PFRVMDEFDVFMD+  R++ I+ ++  A++DGK
Sbjct:    4 ERKRVWQILRKEIAHRTSMEFNKYMHLNNFAGKLKFRHDDQRLEIAVLQNEKGASRASQVTDMKELSGGERSYTQVSLLLALGESIECPFRVMDEFDVFMDSVNRDMTIQLLVDAAKKDGK 124          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M2_ECTSI3.460e-4346.73Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D7G4M1_ECTSI4.480e-2735.12Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A7S3UWL6_HETAK1.260e-2237.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DFF7_9STRA5.290e-2043.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W981_9STRA7.620e-2044.35Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A225W8L5_9STRA1.120e-1939.49Structural maintenance of chromosomes protein n=1 ... [more]
A0A7R9VE37_9STRA6.110e-1942.73Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
W2R5D0_PHYPN9.420e-1937.58SMC_N domain-containing protein n=24 Tax=Phytophth... [more]
A0A8J5J7T2_9STRA1.040e-1837.58Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
G5A786_PHYSP1.180e-1842.15SMC_N domain-containing protein n=1 Tax=Phytophtho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..106
NoneNo IPR availableCOILSCoilCoilcoord: 20..54
NoneNo IPR availableGENE3D3.40.50.300coord: 3..269
e-value: 7.3E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR19306STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6coord: 22..270
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 82..258
e-value: 6.9E-11
score: 42.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 30..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1273contigF-serratus_M_contig1273:23226..28503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1273.2028.1mRNA_F-serratus_M_contig1273.2028.1Fucus serratus malemRNAF-serratus_M_contig1273 23226..28503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1273.2028.1 ID=prot_F-serratus_M_contig1273.2028.1|Name=mRNA_F-serratus_M_contig1273.2028.1|organism=Fucus serratus male|type=polypeptide|length=270bp
MLAESFQEAQEKEVCRSGAYRKVVDKLVRETKNLEQLKINSKEAEDRLKD
VVMEKAKATVKNICTKLGQPWDGKRKDSPLSLELLTEKARVKVARLRQQR
ETLKDSGRANSKAQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLER
DIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGD
ANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQV
RNIAIKQIMAFAQRDGKSRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase