prot_F-serratus_M_contig127.2012.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig127.2012.1
Unique Nameprot_F-serratus_M_contig127.2012.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length148
Homology
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: D8LLJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLJ6_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.070e-79
Identity = 109/147 (74.15%), Postives = 127/147 (86.39%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPWDMEWRRRNGIEEPTHSRRKAPRKNKW 147
            MVFYQ+IV LRPRTNP+DLT IFRR A+ IL+EGGVVR+VANHG+RVLPYRFHS+H+++E D+RWF S RWAS YYDA+P V + ME QLWAEDKV+RV+TRRP TKMDRI S HERSNPWDMEWR RNGIE+P H+RR+ P K KW
Sbjct:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPATKMDRIASTHERSNPWDMEWRNRNGIEQPVHNRRRTPPKKKW 147          
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: A0A835Z0N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.140e-26
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPWDME 124
            M FYQ +   + RT P  LT ++RRL + +L++GG+VR V NHG++ L YRF +R  +   +NR+    RW S+Y+DA P  +  ++  L  +D  LR  T +PV KM+ I++ H+ +NPW+ +
Sbjct:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHK-TNPWERD 123          
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: A0A1E7FMF6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMF6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.020e-21
Identity = 44/121 (36.36%), Postives = 80/121 (66.12%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPW 121
            MVFY+ +++ +  T+   LTA+ ++++  +++ GG+VR++ NHG+R  P+RF +++       R++   R+ S+YYD+NPT ++ +ET L   D+VLRVT  +  +K+D I   HE+ NP+
Sbjct:    1 MVFYECVLSTKHTTHFKALTALMKQVSLKVVENGGIVRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISIYYDSNPTTLKQVETVLTMNDQVLRVTHLKSRSKLDWINYKHEK-NPY 120          
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: A0A7S2IGM9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGM9_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.290e-20
Identity = 44/121 (36.36%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPW 121
            MVFY+ ++  +     + LT + + ++S +++ GG+VR V NHGIR LP+RF +++  +EG NR++   R+ SV+YDA+P V+  +E ++  +D++LR T  +   K+  I  A E+ NP+
Sbjct:    1 MVFYECVLTAKNTAPFTSLTKLMKTISSTVVENGGIVRTVQNHGIRNLPHRFKAKYPDKEG-NRYYKKGRFISVWYDASPRVLAKVENEIRLDDQILRHTHLKARNKLWYINIASEKKNPY 120          
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: K0TLA5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLA5_THAOC)

HSP 1 Score: 90.9 bits (224), Expect = 3.270e-20
Identity = 44/121 (36.36%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPW 121
            MVFY+ ++  +  T+ + LT++ + ++  I++ GG+VR++ NHGIR LP+RF S++  REG NR++   R+ SV+YD+NP   + +ET L   +++LR T  R   + + +    E  NP+
Sbjct:   39 MVFYECLMTAKNTTHYNLLTSLMKEVSHKIVENGGIVRSIQNHGIRQLPHRFKSKYADREG-NRYYEKGRFISVFYDSNPVTAKQVETILNLNEEILRNTHLRASNRFNEVNDLLESRNPY 158          
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: A0A6S8YXD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YXD6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.600e-20
Identity = 43/121 (35.54%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPW 121
            MVFY+ ++  +   + + LT   + ++S +++ GG+VR V NHGIR LP+RF +R+  +EG NR++   R+ SV+YDA+P  +  +E ++  +D++LR T  +   K+  I + +E+ NP+
Sbjct:    1 MVFYECVLTAKNTASFASLTNTVKSISSIVVESGGIVRTVQNHGIRNLPHRFKARYPDKEG-NRYYKEGRFISVWYDASPRTLNQVENEIRLDDQILRYTHLKARNKLWYINNPNEKKNPY 120          
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: A0A7S2MAY0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAY0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.360e-19
Identity = 42/124 (33.87%), Postives = 80/124 (64.52%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPWDME 124
            MVFY+ ++  +   + ++LTA+ + ++  I++ GG+VR++ NHG+R LP+RF +++  REG NR++   R+ SV+YDA+P +++ +E  L  ++++LR T  +   K   + +  E  NP+  E
Sbjct:    1 MVFYECLMTAKNTAHYNNLTALMKDISLKIVNNGGIVRSIQNHGVRQLPHRFRAKYADREG-NRYYEKGRFVSVFYDASPGIMRQVEGILNLDEQILRNTHLKGRNKFMDVNNVREAKNPYIQE 123          
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: A0A1Z5JK56_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JK56_FISSO)

HSP 1 Score: 88.2 bits (217), Expect = 1.860e-19
Identity = 48/121 (39.67%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPW 121
            MVFY+ +V  +   +   LT + + ++  I++ GG+VRAV NHGIR LP+RF + +  REG NR++   R+ S+YYDANP  +  ++T L  +++VLR T  R  + +D I    +R NP+
Sbjct:    1 MVFYECVVTAKNTAHFHTLTNLVKLVSHEIVEGGGIVRAVHNHGIRTLPHRFKATYPDREG-NRYYSKGRFFSIYYDANPDTMSQVDTILKMDEEVLRSTHLRARSTLDFINLREDR-NPY 119          
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: A0A7S1YM88_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM88_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 8.270e-19
Identity = 43/121 (35.54%), Postives = 74/121 (61.16%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPW 121
            MVFY+ ++  +       LT++ + ++  +++ GG+VR+V NHGIR L +RF +RH  R+G  R F   R+ SVYYD++P + + +   L  ++ VLR T  R   K+D I + +++ NP+
Sbjct:    1 MVFYECVITAKNTAPFYQLTSLMKEISLKVVENGGIVRSVQNHGIRDLAHRFRARHPDRDG-TRLFQKGRFISVYYDSSPAIQEEVGEILVMDENVLRATHLRARNKLDTINNPYQKKNPY 120          
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Match: A0A6T7JZ88_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T7JZ88_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.760e-17
Identity = 41/121 (33.88%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    1 MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPYRFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVTTRRPVTKMDRITSAHERSNPW 121
            MVFY+ ++  +      +LT + + ++  +++ GG+VR+V NHGIR LP+RF +++  +EG NR++   R+ SV+YDA+P   + ++  L  +++VLR T  +P  K+      +E+ NP+
Sbjct:    1 MVFYECVLTAKNTAPFMNLTNLMKTVSLKVVERGGIVRSVQNHGIRDLPHRFKAKYPDKEG-NRYYKKGRFISVFYDASPHAREEVQAILDLDEEVLRNTHLKPRNKVTYANIVNEKKNPY 120          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig127.2012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LLJ6_ECTSI1.070e-7974.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0N7_9STRA2.140e-2639.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1E7FMF6_9STRA1.020e-2136.36Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2IGM9_9STRA2.290e-2036.36Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K0TLA5_THAOC3.270e-2036.36Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A6S8YXD6_9STRA3.600e-2035.54Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2MAY0_9STRA1.360e-1933.87Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5JK56_FISSO1.860e-1939.67Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1YM88_9STRA8.270e-1935.54Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6T7JZ88_9STRA2.760e-1733.88Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 4..101
e-value: 6.2E-14
score: 52.0
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 1..125
e-value: 2.8E-17
score: 64.6
IPR035980Ribosomal protein S6 superfamilySUPERFAMILY54995Ribosomal protein S6coord: 1..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig127contigF-serratus_M_contig127:668787..671178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig127.2012.1mRNA_F-serratus_M_contig127.2012.1Fucus serratus malemRNAF-serratus_M_contig127 668728..671599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig127.2012.1 ID=prot_F-serratus_M_contig127.2012.1|Name=mRNA_F-serratus_M_contig127.2012.1|organism=Fucus serratus male|type=polypeptide|length=148bp
MVFYQKIVALRPRTNPSDLTAIFRRLASGILDEGGVVRAVANHGIRVLPY
RFHSRHELREGDNRWFGSARWASVYYDANPTVVQHMETQLWAEDKVLRVT
TRRPVTKMDRITSAHERSNPWDMEWRRRNGIEEPTHSRRKAPRKNKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000529Ribosomal_S6
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR035980Ribosomal_S6_sf