prot_F-serratus_M_contig127.2002.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig127.2002.1
Unique Nameprot_F-serratus_M_contig127.2002.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length500
Homology
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BLAST of mRNA_F-serratus_M_contig127.2002.1 vs. uniprot
Match: D7FK49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK49_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 1.630e-88
Identity = 253/431 (58.70%), Postives = 282/431 (65.43%), Query Frame = 0 
Query:    7 DELIESLERMAKEREKTILH----------GGNEGEETGPAVHEHSDTWGFAWMPVIENFVEQATPER-------------------DADIDSVVL-----------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSYNETLLADKTFHNPHASETMADAYGILRPASFVLDVRADDRTWG----VTAAGT-------GATDKDDGN----DRSWFYDTVRDRQNRLWADSRVRKGVELARKGQHQDAIDVYTQALGMCPDHDDGLVARGAAFATTGRLRQAMQDLSRALSLNPQNDNASSYLQETRSRRMERQQ-------------------RADG------GTNRASLEGGIDADRGASIL-SRG--EADNGSKSALASLLRDGAEEDALRKMRVLLE 348
            DE+I  L+R A+ERE+ + +           G+E E+ G +V+EH+DTWGF+WMP IE+FVEQA   +                   D D     L                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    PSYNETLLADK+FHNPHASETMADA+GILRPASFVLDV  DDR WG    V AAG        G  D   G+    D++WFYDTVRDRQNRLWAD+RVRKGVELARKGQHQ AID YTQALGMCPDHDDGLVARGAAFATTGRLRQA+QDLSRALS+NPQN NASSYL+ETR RRMERQ+                   R D       G N  S  GG  A   AS++ S G  E D  S++AL +LL DGAE DALRKMR LLE
Sbjct:   26 DEMIR-LKRKAQEREEKLRNQASGRLADPPNGDE-EDAGASVNEHADTWGFSWMPAIEDFVEQAAEAQQQNXXXXXESSPLGANYRSDTDXXXXXLRGPPTNTSRSSFCDPTSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPPSYNETLLADKSFHNPHASETMADAFGILRPASFVLDVGEDDRPWGGAAGVAAAGAKGATAEGGEADVTTGHGGSEDQNWFYDTVRDRQNRLWADTRVRKGVELARKGQHQAAIDTYTQALGMCPDHDDGLVARGAAFATTGRLRQAVQDLSRALSVNPQNGNASSYLKETR-RRMERQEARETPGASATTGNTTTFESRTDSIVNGRMGLNCVSAAGG--AVMPASVMPSAGSTERDEASEAALGALLHDGAEGDALRKMRALLE 451
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BLAST of mRNA_F-serratus_M_contig127.2002.1 vs. uniprot
Match: A0A836CKS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS1_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.130e-15
Identity = 54/138 (39.13%), Postives = 67/138 (48.55%), Query Frame = 0 
Query:  147 MADAYGILRPASFVLDVRADDRTWGVTAAGTGATDKDDGNDRSWFYDTVRDRQNRLWADSRVRKGVELARKGQHQDAIDVYTQALGMCPDHDDGLVARGAAFATTGRLRQAMQDLSRALSLNPQNDNASSYLQETRSR 284
            MA A+ + RP SF +DV AD         G GA        R WF++ +R+RQ+R WAD+RV KG ELAR GQH  AI  Y QALGMC  H D +                         L+P   NA +YL  T +R
Sbjct:    1 MASAFRVCRPLSFAVDVAAD---------GAGA--------RDWFFEDLRERQDRTWADTRVAKGAELARSGQHAAAIKYYDQALGMCAGHVDAVXXXXXXXXXXXXXXXXXXXXXXXXXLDPTCANARAYLSATLTR 121
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BLAST of mRNA_F-serratus_M_contig127.2002.1 vs. uniprot
Match: L1I460_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I460_GUITC)

HSP 1 Score: 65.9 bits (159), Expect = 1.010e-9
Identity = 36/93 (38.71%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:  192 YDTVRDRQNRLWADSRVRKGVELARKGQHQDAIDVYTQALGMCPDHDDGLVARGAAFATTGRLRQAMQDLSRALSLNPQNDNASSYLQETRSR 284
            Y  +R +QN  WA+  VRKG+  A    +  AI  Y  AL +  ++ D  VA GAA+A T +  +A++  S+AL + P + NA  YL  TRS+
Sbjct:    3 YSELRKKQNVSWANESVRKGIHHAADRNYVMAIKCYQNALELDSENADAYVALGAAYANTSKSHEAIEAFSKALEIQPDHSNAIKYLNATRSK 95
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BLAST of mRNA_F-serratus_M_contig127.2002.1 vs. uniprot
Match: A0A1Y2GTU8_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GTU8_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 6.230e-9
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 0 
Query:  188 RSWFYDTVRDRQNRLWADSRVRKGVELARKGQHQDAIDVYTQALGMCPDHDDGLVARGAAFATTGRLRQAMQDLSRALSLNPQNDNASSYLQET 281
            R   Y  +RD QNR WA      G+E A+KGQ  DAI  Y+QA+ +   + +  VARG +     + R A+ D   ALSL+P ND+A  YL+ T
Sbjct:  247 RKETYLDLRDDQNRNWAMDSFAAGIEFAQKGQLDDAIKAYSQAIQIDAKYVEAYVARGCSLTHLKKWRAAIMDFRAALSLDPSNDSARQYLEST 340
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BLAST of mRNA_F-serratus_M_contig127.2002.1 vs. uniprot
Match: A0A0G4HYB4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HYB4_9ALVE)

HSP 1 Score: 63.2 bits (152), Expect = 9.820e-7
Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:  203 WADSRVRKGVELARKGQ----HQDAIDVYTQALGMCPDHDDGLVARGAAFATTGRLRQAMQDLSRALSLNPQNDNASSY 277
            WA+ RVR+GV +A+  +      +AI  Y  AL +  +H+D LVA+GAA A  G+ ++A++   RAL   P+N NA  Y
Sbjct:  768 WAERRVREGVAIAKSSRGDSDFDEAIAFYDSALDLVSNHEDALVAKGAALANLGKFQEALELFQRALRFFPENKNAKQY 846
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig127.2002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FK49_ECTSI1.630e-8858.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKS1_9STRA3.130e-1539.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L1I460_GUITC1.010e-938.71Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A1Y2GTU8_9FUNG6.230e-941.49Uncharacterized protein n=1 Tax=Lobosporangium tra... [more]
A0A0G4HYB4_9ALVE9.820e-740.51Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 204..237
e-value: 0.012
score: 24.8
coord: 238..271
e-value: 0.32
score: 20.0
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 205..237
e-value: 0.11
score: 12.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 238..271
score: 10.119
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 204..237
score: 8.821
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 193..286
e-value: 4.2E-15
score: 57.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 203..275
IPR039190Tetratricopeptide repeat protein 14PANTHERPTHR23184FAMILY NOT NAMEDcoord: 117..451
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 204..271
score: 18.052

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig127contigF-serratus_M_contig127:359392..372924 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig127.2002.1mRNA_F-serratus_M_contig127.2002.1Fucus serratus malemRNAF-serratus_M_contig127 359254..372924 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig127.2002.1 ID=prot_F-serratus_M_contig127.2002.1|Name=mRNA_F-serratus_M_contig127.2002.1|organism=Fucus serratus male|type=polypeptide|length=500bp
MTHFVVDELIESLERMAKEREKTILHGGNEGEETGPAVHEHSDTWGFAWM
PVIENFVEQATPERDADIDSVVLDDDTNDPDDESASPKRQQHQQQQQERE
EEGGIEGGGATASGSGGRKRRRRRPPSYNETLLADKTFHNPHASETMADA
YGILRPASFVLDVRADDRTWGVTAAGTGATDKDDGNDRSWFYDTVRDRQN
RLWADSRVRKGVELARKGQHQDAIDVYTQALGMCPDHDDGLVARGAAFAT
TGRLRQAMQDLSRALSLNPQNDNASSYLQETRSRRMERQQRADGGTNRAS
LEGGIDADRGASILSRGEADNGSKSALASLLRDGAEEDALRKMRVLLEED
ERKRKRDRKGEGEDHDNDSRGTEESRKKKARKKEKKSKSRRSSSSRHKKE
RERRKSNGGHTGGGGGEVGSSTSGSDSDDSEARKKRKKHRHKHKKKSRTR
SVSPSQAVLDVRNGGGWSGAVGAFPSSGEDSGKEEAHPILQRKKHSLWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR039190TTC14
IPR013026TPR-contain_dom