prot_F-serratus_M_contig127.1998.1 (polypeptide) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 268 bits (684), Expect = 5.550e-81 Identity = 155/375 (41.33%), Postives = 221/375 (58.93%), Query Frame = 0
Query: 4 GEVENCRCQLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEF---------PGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVN--KEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKD 367
G+V + +LVA+G+ Q G+ Y E YSP S+R +LA A+ E+ D AFL +++EEIY+E+PE +E V L +++YGL QA R WN + + GFE A ADPCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++KD+G A + +G I + + R L Q Y ES+IK+F K P GV L+KADEPQ+ E+K +MK PYR VG+LM+ A TRPDI+ AV ++RF ENPG H A +K+ +YLL TKD GI Y G G EAY+D+D+ D RRSVSG +LML + W S Q+ A ++EAEY+AL++ VK+
Sbjct: 124 GQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKE 495
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 261 bits (666), Expect = 4.460e-80 Identity = 140/344 (40.70%), Postives = 209/344 (60.76%), Query Frame = 0
Query: 28 EKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVNKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLF 370
E Y+PT + +S+R+L A A ++ LRHFD QAF+++D+DE++++ +PE G + +LNK++YGL QA R W++ + +GF Q AD CVFR + +G + +VVHVDDI + +++ D+F +L +K++GD +Y GC R+ LK Q Y E + F V ++P G+ LS+ D+ EE+ +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P H +A + I Y++ T D GIT+ G GL ME + D+D+ + RRSVSG ++M G ISW SR Q+ T+EAEYV+LA+ +K+VLF
Sbjct: 10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLF 345
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 274 bits (701), Expect = 2.040e-79 Identity = 146/369 (39.57%), Postives = 220/369 (59.62%), Query Frame = 0
Query: 2 KDGEVENCRCQLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVNKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLF 370
K+G+++ + +LVA+GF Q+ V Y SP PS+ASI+++LA A K L H+D QA+ A +DEE+++++P + + + +AIYGL Q+GR W D + GFEQ KADPCVFRK+VD M++V++VDDIL D+ + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SM++RFDV +++PA G K E EE +P REA+G++MW +T +RPD++ AVRAVAR P H A+ KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + +S S+ Q + + ++EAEY+A E VK+ LF
Sbjct: 794 KEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALF 1152
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 267 bits (683), Expect = 3.990e-79 Identity = 146/376 (38.83%), Postives = 221/376 (58.78%), Query Frame = 0
Query: 2 KDGEVENCRCQLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVNKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTS-------EAEYVALAEAVKDVLF 370
K+G+++ + +LVA+GF Q+ V Y SP PS+ASI+++LA A K L H+D QA+ A +DEE+++++P + + + +AIYGL Q+GR W D + GFEQ KADPCVFRK+VD M++V++VDDIL D+ + A L +KF K++ + +++ GC I R+ +T L+ Q Y++SM+KRFDV +++PA+ GV K D+ + E +P REA+G++MW +T +RPD++ AVRAVAR P H A+ KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + +S S+ Q + + ++ EAEY E VK+ LF
Sbjct: 348 KEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTXXXXXXTEAEYFTAGECVKEALF 713
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 261 bits (668), Expect = 4.520e-79 Identity = 146/369 (39.57%), Postives = 211/369 (57.18%), Query Frame = 0
Query: 2 KDGEVENCRCQLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVNKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLF 370
KDG++E + +LVA+GF Q+ V Y SP PS+ASI+++LA A K +L H+D QAF A +DE++++ +P E V + +AIYGL Q+GR W D + GFEQ KADPCVFRK+ D D IL D + A+ L + F KD+G+ ++ GC + R+ + L+ Q Y++S++ RFDV + +PA+ GV K D+ E +P REA+G++MW +T +RPDI+ AVRAVAR P H KA++KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + IS S+ Q + + ++EAEY+A E VK+ LF
Sbjct: 57 KDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLAS-LNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGE-------WPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYE-RGSGLGLAVYVDASY-ADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALF 415
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 274 bits (701), Expect = 4.970e-79 Identity = 146/369 (39.57%), Postives = 220/369 (59.62%), Query Frame = 0
Query: 2 KDGEVENCRCQLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVNKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLF 370
K+G+++ + +LVA+GF Q+ V Y SP PS+ASI+++LA A K L H+D QA+ A +DEE+++++P + + + +AIYGL Q+GR W D + GFEQ KADPCVFRK+VD M++V++VDDIL D+ + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SM++RFDV +++PA G K E EE +P REA+G++MW +T +RPD++ AVRAVAR P H A+ KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + +S S+ Q + + ++EAEY+A E VK+ LF
Sbjct: 1173 KEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALF 1531
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 274 bits (701), Expect = 5.090e-79 Identity = 146/369 (39.57%), Postives = 220/369 (59.62%), Query Frame = 0
Query: 2 KDGEVENCRCQLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVNKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLF 370
K+G+++ + +LVA+GF Q+ V Y SP PS+ASI+++LA A K L H+D QA+ A +DEE+++++P + + + +AIYGL Q+GR W D + GFEQ KADPCVFRK+VD M++V++VDDIL D+ + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SM++RFDV +++PA G K E EE +P REA+G++MW +T +RPD++ AVRAVAR P H A+ KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + +S S+ Q + + ++EAEY+A E VK+ LF
Sbjct: 1193 KEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALF 1551
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 274 bits (701), Expect = 5.180e-79 Identity = 146/369 (39.57%), Postives = 220/369 (59.62%), Query Frame = 0
Query: 2 KDGEVENCRCQLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVNKEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLF 370
K+G+++ + +LVA+GF Q+ V Y SP PS+ASI+++LA A K L H+D QA+ A +DEE+++++P + + + +AIYGL Q+GR W D + GFEQ KADPCVFRK+VD M++V++VDDIL D+ + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SM++RFDV +++PA G K E EE +P REA+G++MW +T +RPD++ AVRAVAR P H A+ KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + +S S+ Q + + ++EAEY+A E VK+ LF
Sbjct: 1336 KEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALF 1694
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.330e-78 Identity = 154/375 (41.07%), Postives = 224/375 (59.73%), Query Frame = 0
Query: 4 GEVENCRCQLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEF---------PGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVN--KEAKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKD 367
G+V + +LVA+G+ Q G+ Y E YSP SIR +L +A+ E+ D AFL ++ EIY+E+PEE +E V L +++YGL QA R WN ++ ++GFE A ADPCV+ + +GE E +V ++VDD+L ++ A + A + +KF++KD+G A + +G I + + R L Q Y ES+IK+F K P GV L+KADEPQ+ E+K +MK+ PYR VG+LM+ A TRPDI+ AV ++RF ENPG H A +K+ +YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML + + W S Q+ A ++EAEY+AL++ VK+
Sbjct: 455 GQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLEKCSAEGMEIEQCDVDTAFLYEKLEAEIYMELPEELRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKNLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKE 826
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR) HSP 1 Score: 259 bits (661), Expect = 1.770e-78 Identity = 145/366 (39.62%), Postives = 217/366 (59.29%), Query Frame = 0
Query: 3 DGEVENCRCQLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATATAKDGELRHFDAGQAFLKADIDEEIYIEIPEEFQEFP--GAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVNKEAK--VPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEA 364
DG+VE + +LVA+G+ Q EG+ Y E +SP SIR+LLA A D E+ D AFL ++ EE+Y+ PE F V +L ++IYGL QA R WN +F + + F + + +PCV++K+ G + + +V++VDDIL D +M L ++F +KD+G+A Y +G I R+R R L Q +Y+++++KR+++ K + +P GV +LS+ + P++ EE+E M PY AVGA+M+T T TRPD+A A+ +R+ NPG H K V I +YL TKD + YG L ++ YTD+ F + D +S+SG V L GAISW S Q A T+EAEY+A +EA
Sbjct: 150 DGKVETYKARLVAKGYRQKEGIDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEEVYMTQPEGFTSLSDHNKVCKLQRSIYGLKQASRSWNIRFNNTIEKFNFVKCEEEPCVYKKI-SGSSIIFLVLYVDDILLFGNDIPSMQSTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGV-SLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGNSE--LSLKGYTDASFASDKDDSKSISGYVFTLNGGAISWKSSKQATVADSTTEAEYIAASEA 511 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig127.1998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig127.1998.1 ID=prot_F-serratus_M_contig127.1998.1|Name=mRNA_F-serratus_M_contig127.1998.1|organism=Fucus serratus male|type=polypeptide|length=370bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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