prot_F-serratus_M_contig1257.1913.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1257.1913.1
Unique Nameprot_F-serratus_M_contig1257.1913.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length335
Homology
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: D7FK87_ECTSI (Similar to Tyrosyl-tRNA synthetase, cytoplasmic (Tyrosyl--tRNA ligase) (TyrRS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK87_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 3.810e-97
Identity = 171/294 (58.16%), Postives = 199/294 (67.69%), Query Frame = 0
Query:   61 SAVSVEVISPREVALDLPPVADDARWGYTVKWFLEDSPIIFDQVTTVSQSRLKLINLAPARSYVALVRRVGSL----------ETSTARVEFSTPEAEGNATGVMTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGEPRCV-----TIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEMKTRAPD----GVASWEDLAMETSCGGACTSSVL-GRVR 334
            S+ +  V+S RE  ++LPP+  D   GY+VKWF ED+P IFDQ T   QSRL L +L+P   YVA+VRR  +           + +   + FSTPEAEGNA+G M ELSRLEIRVGRC+E SKHPDADSLYVE VDFG+GEPRC+     TIVS LV YV E EMR R+VVGLCNLP RAMRGVTS GMLLCASN+DH+              VDPLSPPE A +G+LITF  VLSAP+PP S A+RAWSA ME MKT        GVA W+   M TS G ACTSS+  GRVR
Sbjct:   15 SSAAASVVSAREAVVELPPLGGDGV-GYSVKWFEEDNPAIFDQATASLQSRLVLSDLSPGTEYVAVVRRTATAAAAAPAGEAGDNAARELRFSTPEAEGNASGEMMELSRLEIRVGRCLECSKHPDADSLYVETVDFGEGEPRCLGPVDKTIVSRLVAYVPENEMRGRMVVGLCNLPSRAMRGVTSSGMLLCASNDDHSS-------------VDPLSPPEGAKIGELITFESVLSAPAPPSSGASRAWSATMEGMKTAEATADGVGVAGWDGRPMLTSAG-ACTSSIAAGRVR 293          
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: A0A6H5KCD4_9PHAE (tRNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD4_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.760e-67
Identity = 123/185 (66.49%), Postives = 136/185 (73.51%), Query Frame = 0
Query:  155 MTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGEPRCVTIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEMKTRAPD----GVASWEDLAMETSCGGACTSSVL-GRVR 334
            M ELSRLEIRVGRC+E SKHPDADSLYVE +DFG+GEPR  TIVSGLV YV E+EMR R+VVGLCNLP RAMRGVTS GMLLCASN+DH+              VDPLSPPE A +G+LITF GVLSAP+PP S A+RAWSA  E MKT        GVA W+   M TS G ACTSS+  GRVR
Sbjct:    1 MMELSRLEIRVGRCLECSKHPDADSLYVETIDFGEGEPR--TIVSGLVAYVPEDEMRGRMVVGLCNLPSRAMRGVTSSGMLLCASNDDHSS-------------VDPLSPPEGAKIGELITFEGVLSAPAPPSSGASRAWSATREGMKTAEATADGVGVAGWDGRPMLTSAG-ACTSSIAAGRVR 169          
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: A0A7S0FZY8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZY8_9RHOD)

HSP 1 Score: 167 bits (423), Expect = 4.310e-46
Identity = 107/246 (43.50%), Postives = 142/246 (57.72%), Query Frame = 0
Query:   87 GYTVKWFLEDSPIIFDQVTTVSQSRLKLINLAPARSYVALVRRVGSLE----TSTARVEFSTPEAEGNATGV------MTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGEPRCVTIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEMKTRAPDGVASWEDLAMETSCG 322
             Y V +  + +P  F    TV++S + L  L+P  SY   +  + S +     S   +   TPE+ G  +        +TELSRLEIR G  V+  KHP+AD+LYVE +D G+ EPR  TIVSGLV ++SEEE+  R VV LCNL PR MRG+ S GMLLCASN DH+              VDPLSPPEE   G+LITF G  SAP  PG+ A +A+    +++ T   DG+A ++D A +T  G
Sbjct:   51 AYRVAYKSDSNPASF---RTVTRSSVILKGLSPGSSYDMSISELDSKKLLSRASFTTMSAETPESAGAESEKQAEDLPLTELSRLEIRAGTVVQCKKHPEADTLYVETIDVGEQEPR--TIVSGLVKFLSEEELTGRRVVVLCNLKPRTMRGIISQGMLLCASNADHSE-------------VDPLSPPEECGNGELITFDGHKSAPIDPGNRATKAFDRVADDLSTN-EDGIAQYQDAAFKTPFG 277          
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 163 bits (413), Expect = 9.720e-45
Identity = 109/236 (46.19%), Postives = 141/236 (59.75%), Query Frame = 0
Query:  107 VSQSRLKLINLAPARSYVALVRRVG-SLETSTARVEFST---PEAEGNATGV----MTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGEPRCVTIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEMKTRAPDGVASWEDLAMETSCGGACTS-SVLGRV 333
            V+  R+ L  L P   Y   VR  G + ++ST+    +T   P A G+        +TELSRLEIRVG+ +E  KHPDAD+LYVEKVD G+ EPR  TIVSGLV Y+  E+M  R VV LCNL PRAMRGVTS GMLLCASNEDHT              VDPL  P++  +G+L+TF G  SAP  P + A +A+    + + T    GVA +ED+   TS G   ++ +V+G +
Sbjct:   61 VAHPRVNLKGLKPGTPYD--VRVTGDAFDSSTSFTTVATAQAPAAVGDGDSAPDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVGEEEPR--TIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTV-------------VDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEA-GVAMFEDVPFSTSAGPCFSAENVIGSI 278          
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 160 bits (405), Expect = 4.030e-44
Identity = 92/173 (53.18%), Postives = 114/173 (65.90%), Query Frame = 0
Query:  155 MTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGEPRCVTIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEMKTRAPDGVASWEDLAMETSCGGACTS 327
            +TELSRLEIRVG+ VE  +HPDAD+LYVEKVD G+ EPR  TIVSGLV ++S+EE+  R V+ LCNL PRAMRG+ S GMLLCASNEDHT+             VDPL+ P +A +G LITF G  +AP   G+ A++A+     E  T A DG+A +      T  G AC S
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVGEDEPR--TIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTK-------------VDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTDA-DGIARFNATPFMTEAG-ACYS 223          
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: A0A7S1TKX4_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TKX4_9RHOD)

HSP 1 Score: 161 bits (408), Expect = 2.200e-43
Identity = 112/245 (45.71%), Postives = 133/245 (54.29%), Query Frame = 0
Query:  106 TVSQSRLKLINLAPARSYVALVRRV-GSLETSTARVEFST------------------PEAEGNATG----VMTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGEPRCVTIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEMKTRAPDGVASWEDLAMETSCGGACTS 327
            TVSQ  ++L  + PA SY A ++ + GS        +F T                  P  EG         +TE SRLEIRVGR +E  KHPDAD+LYVEKVD G  EP   TIVSGLV YV  +EM  R VV LCNL PRAMRGVTS GMLLCASNEDHT              VDPL+ PE+  +G LIT  G  SAP   G+ A++A+     + +T   DG+A  ED A  T   G C S
Sbjct:   98 TVSQPMVRLAGMRPAVSYTAGIQPLFGSAANEWRTTQFRTHAISGGEIDAVGQDPVGVPAGEGGVDSGNDAPVTEFSRLEIRVGRILECEKHPDADTLYVEKVDVG--EPETRTIVSGLVKYVPLDEMIGRTVVVLCNLKPRAMRGVTSFGMLLCASNEDHTE-------------VDPLTAPEDTPIGTLITAPGHRSAPVEAGNRASKAFDRVAAQFRTDG-DGIAYVEDAAFSTP-NGPCYS 325          
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 156 bits (394), Expect = 4.590e-41
Identity = 96/204 (47.06%), Postives = 122/204 (59.80%), Query Frame = 0
Query:  124 VALVRRVGSLETSTARVEFSTPEAEGNATGVMTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGE-PRCVTIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEMKTRAPDGVASWEDLAMETSCGGACT 326
            V  V R G  E    R    T +      G +TELSRLEIR G+ +EIS+HP+AD LYVEK+D G+ + PR  TIVSGLV Y +EEE+  R VV L NL PRA++G+TS GMLLCASNEDHT              V PLSPP    +G+LITF G  +AP PPG+ A +A+    EE+     D +A+++ +   TS G   T
Sbjct:  166 VVRVEREGLAEKVVGRARLETGKVVEAPKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEADGPR--TIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTV-------------VKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGA-GEDMIATYKGIPFMTSKGPVTT 353          
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 151 bits (381), Expect = 2.930e-40
Identity = 93/194 (47.94%), Postives = 123/194 (63.40%), Query Frame = 0
Query:  129 RVGSLETSTARVEFSTPEAEGNATGVMTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGEPRCVTIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEMKTRAPDGVASWEDLAMETSCG 322
            R+ SLE  +A +E +    EG +   +TELSRLEIRVG+ ++  KHP+ADSLYVE+VD GD E     IVSGLV +V  EEM DR V+ LCNL PR MRG++S GMLLCASNEDH++             VDPL+ PE   +G L+TF G  S P+P G+ A++A+    + ++T A  GVA +E +   T  G
Sbjct:   68 RMSSLEDGSAALETAAGN-EGESLP-LTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVGD-ESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQ-------------VDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTDAT-GVAMFEQVPFATPSG 244          
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 149 bits (377), Expect = 8.270e-40
Identity = 89/194 (45.88%), Postives = 117/194 (60.31%), Query Frame = 0
Query:  140 VEFSTPEAEGNATGVMTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGEPRCVTIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEMKTRAPDGVASWEDLAMETSCGGACTSSVLGRV 333
            V+    E      G + E SRLEIRVG+ V++S HPDAD LYVEK+D G+ EPR  TIVSGLV Y+  E++ DR VV L NL PRAMRG+TS GMLLCASNEDH++             V PLSPPE +  G+LIT  G LS P  P + A++A+    +++     D + +  D     +  G CTS++ G +
Sbjct:   68 VDTDAKEEAAAPAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCGEDEPR--TIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQ-------------VVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVN--DDLQATFDGKPFLTPNGPCTSTMKGAI 244          
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.270e-38
Identity = 87/183 (47.54%), Postives = 114/183 (62.30%), Query Frame = 0
Query:  125 ALVRRVGSLETSTARVEFSTPEAEGNA---TGVMTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGE---PRCVTIVSGLVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTLLTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEEM 301
            A +RR  ++ T     + +  E E      TG +TEL+RLEIR+G+ VEI++HPDADSLYVEKVD G GE   PR  TIVSGLV +  E ++  R VV LCNL P  M+GVTS GMLLC+SNEDH++             V+PL PPE   +G+L+TF G L +P   G+ A +AW  A + +
Sbjct:   56 AALRRPTAVRTMMMMSDAAVTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPR--TIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSK-------------VEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTL 223          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1257.1913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK87_ECTSI3.810e-9758.16Similar to Tyrosyl-tRNA synthetase, cytoplasmic (T... [more]
A0A6H5KCD4_9PHAE1.760e-6766.49tRNA-binding domain-containing protein n=1 Tax=Ect... [more]
A0A7S0FZY8_9RHOD4.310e-4643.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IUX7_9FLOR9.720e-4546.19Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A7S0ZE83_9RHOD4.030e-4453.18Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S1TKX4_9RHOD2.200e-4345.71Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
W7U6C4_9STRA4.590e-4147.06Endothelial monocyte-activating polypeptide ii pro... [more]
A0A5J4Z2W6_PORPP2.930e-4047.94Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]
A0A7S2V4I0_9STRA8.270e-4045.88Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7FMW6_ECTSI1.270e-3847.54Endothelial monocyte-activating polypeptide II pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 163..244
e-value: 8.1E-24
score: 83.6
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 157..275
score: 27.472
NoneNo IPR availableGENE3D2.40.50.140coord: 157..334
e-value: 4.0E-44
score: 152.3
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 145..327
NoneNo IPR availablePANTHERPTHR11586:SF33AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN 1coord: 145..327
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..334
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.671
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 43..146
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 158..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1257contigF-serratus_M_contig1257:93442..95741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1257.1913.1mRNA_F-serratus_M_contig1257.1913.1Fucus serratus malemRNAF-serratus_M_contig1257 93442..95753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1257.1913.1 ID=prot_F-serratus_M_contig1257.1913.1|Name=mRNA_F-serratus_M_contig1257.1913.1|organism=Fucus serratus male|type=polypeptide|length=335bp
MAATWLRLLVAWYTLARSSGFAAIRRPFLSISPSSARDSRTHGASTIPSC
AAVADSPIRPSAVSVEVISPREVALDLPPVADDARWGYTVKWFLEDSPII
FDQVTTVSQSRLKLINLAPARSYVALVRRVGSLETSTARVEFSTPEAEGN
ATGVMTELSRLEIRVGRCVEISKHPDADSLYVEKVDFGDGEPRCVTIVSG
LVGYVSEEEMRDRLVVGLCNLPPRAMRGVTSVGMLLCASNEDHTRQAKTL
LTIFCYNRVDPLSPPEEATVGDLITFAGVLSAPSPPGSAAARAWSAAMEE
MKTRAPDGVASWEDLAMETSCGGACTSSVLGRVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR036116FN3_sf
IPR012340NA-bd_OB-fold