prot_F-serratus_M_contig1242.1857.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1242.1857.1
Unique Nameprot_F-serratus_M_contig1242.1857.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length149
Homology
BLAST of mRNA_F-serratus_M_contig1242.1857.1 vs. uniprot
Match: D7G1V6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1V6_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.880e-21
Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 0
Query:    6 EDRVYAALGFGGGLLLAFAQIPQIYRVQTRKSSSDLSYVYQFTFATGIVMFLVYYGYKRRYPLLIPASISLAMILYLIALKTYLELLAP-----------WLRSTRDSLHHDGELRQALLEGASDSSDVGAGEEEPGNRSSDDEFL 140
            +D+++ A G  GGLLLA AQ+PQIY V  R  S D+SY+YQF FA G++ FL+YYGY   + + +P+ +SL  + YLI LK YLE + P            LR   D       L + LL GAS        EE+ G    DDEF+
Sbjct:   14 QDQLFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGMICFLIYYGYNGLWAVFVPSCLSLVCMCYLIGLKAYLEEMKPKRTVATQMINDLLRDDDDGFDDLDGLDRPLLGGAS--------EEKKG----DDEFI 147          
BLAST of mRNA_F-serratus_M_contig1242.1857.1 vs. uniprot
Match: D7G1V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V2_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 7.050e-18
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    6 EDRVYAALGFGGGLLLAFAQIPQIYRVQTRKSSSDLSYVYQFTFATGIVMFLVYYGYKRRYPLLIPASISLAMILYLIALKTYLE 90
             D VY  +GF GG ++A + +PQ+YRV  RK ++D+S+ YQ  F TGIVMFLV+YGY   + L  PA  S+ + +YL  LK  LE
Sbjct:    2 SDTVYDVMGFLGGCVMAASLVPQVYRVTVRKKAADISHTYQVVFVTGIVMFLVFYGYYELWELFFPALASMMLQIYLAVLKIRLE 86          
BLAST of mRNA_F-serratus_M_contig1242.1857.1 vs. uniprot
Match: D7G1V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V3_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.500e-14
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    6 EDRVYAALGFGGGLLLAFAQIPQIYRVQTRKSSSDLSYVYQFTFATGIVMFLVYYGYKRRYPLLIPASISLAMILYLIALKTYLE 90
             D  Y  +G  GGL++AFA +PQ+ RV  RK S+D+SY +   F  G+VMFL YYGY   + +  PA +S++  + L+ALK  LE
Sbjct:    3 SDVPYNLMGASGGLIVAFAFVPQLARVIRRKQSADISYAHLMVFVGGLVMFLAYYGYYELWEVFFPALLSMSFAILLLALKIRLE 87          
BLAST of mRNA_F-serratus_M_contig1242.1857.1 vs. uniprot
Match: D8LCW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW9_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.400e-9
Identity = 29/78 (37.18%), Postives = 51/78 (65.38%), Query Frame = 0
Query:   13 LGFGGGLLLAFAQIPQIYRVQTRKSSSDLSYVYQFTFATGIVMFLVYYGYKRRYPLLIPASISLAMILYLIALKTYLE 90
            +GF GG++LA A +PQIY   +RKS++D+SY++Q  +  G++  ++YY + R + +  P +   + ++YL  LK Y E
Sbjct:   11 IGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYE 88          
BLAST of mRNA_F-serratus_M_contig1242.1857.1 vs. uniprot
Match: A0A3R7HBR8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HBR8_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 9.610e-7
Identity = 28/82 (34.15%), Postives = 49/82 (59.76%), Query Frame = 0
Query:    7 DRVYAALGFGGGLLLAFAQIPQIYRVQTRKSSSDLSYVYQFTFATGIVMFLVYYGYKRRYPLLIPASISLAMILYLIALKTY 88
            + +Y  LG  G  L++ A +PQI +V   KS+ D+S V+QF FA G++   +Y   +  +P+ IP+++ L   + L+ +K Y
Sbjct:    5 ETLYDTLGLVGSFLVSAALVPQILKVYRSKSAKDISSVFQFVFAVGVLCITIYGLGEGLWPIWIPSTLELLAGIILLVMKHY 86          
BLAST of mRNA_F-serratus_M_contig1242.1857.1 vs. uniprot
Match: A0A1E7FTB5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTB5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.000e-6
Identity = 26/74 (35.14%), Postives = 44/74 (59.46%), Query Frame = 0
Query:   13 LGFGGGLLLAFAQIPQIYRVQTRKSSSDLSYVYQFTFATGIVMFLVYYGYKRRYPLLIPASISLAMILYLIALK 86
            +GF GG  ++ + IPQ+Y+    KS+ D+SY YQ  +  G  + L+Y    R +P+ IP ++ L +I+ L  +K
Sbjct:    9 IGFVGGTTISLSLIPQVYKTFHSKSAGDISYYYQAIYIVGCTLTLIYAAALRLWPVYIPITLELTLIISLTVMK 82          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1242.1857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G1V6_ECTSI1.880e-2141.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1V2_ECTSI7.050e-1848.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1V3_ECTSI1.500e-1444.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCW9_ECTSI1.400e-937.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A3R7HBR8_9STRA9.610e-734.15Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A1E7FTB5_9STRA1.000e-635.14Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 12..59
e-value: 7.7E-7
score: 28.8
NoneNo IPR availableGENE3D1.20.1280.290coord: 8..90
e-value: 6.0E-13
score: 50.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 41..60
NoneNo IPR availableTMHMMTMhelixcoord: 9..26
NoneNo IPR availableTMHMMTMhelixcoord: 67..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1242contigF-serratus_M_contig1242:199284..206114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1242.1857.1mRNA_F-serratus_M_contig1242.1857.1Fucus serratus malemRNAF-serratus_M_contig1242 198917..207351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1242.1857.1 ID=prot_F-serratus_M_contig1242.1857.1|Name=mRNA_F-serratus_M_contig1242.1857.1|organism=Fucus serratus male|type=polypeptide|length=149bp
MTYSHEDRVYAALGFGGGLLLAFAQIPQIYRVQTRKSSSDLSYVYQFTFA
TGIVMFLVYYGYKRRYPLLIPASISLAMILYLIALKTYLELLAPWLRSTR
DSLHHDGELRQALLEGASDSSDVGAGEEEPGNRSSDDEFLSSKAQTDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt