prot_F-serratus_M_contig124.1836.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig124.1836.1
Unique Nameprot_F-serratus_M_contig124.1836.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1142
Homology
BLAST of mRNA_F-serratus_M_contig124.1836.1 vs. uniprot
Match: D7G1N7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N7_ECTSI)

HSP 1 Score: 668 bits (1723), Expect = 1.870e-211
Identity = 435/1068 (40.73%), Postives = 576/1068 (53.93%), Query Frame = 0
Query:   54 ENYKVNFWESVKATFPWTEAGAKAAYAEERLVAVDEFRGELDQALLIQKMIDAGMHDRALKRLMASTEGQMYHNFHKHRHALEQSGGWSFTPSSVQRKLKTPTKRADAVENLRKYVAMRRDRFRRIRCLCDQVKSAIINSTDRIVPVVPGNLIGKKTLAISEGMMKNTPQGDV--SKRKKCKWQGVSSKSEVFTCTNDRMEHPQRQFPDKFGVLVHDTLATCGWHASHCVSSVHGKDAVVISTANEGALCNECLAQIIKGPLKNSTAFSAPRVRLKRKNNIKHGEENTLVRNKWFTKAPGRLRENAVCPRHPYAPPGAPPASVRPPAIFIPPPPSPPLLSVENLRQHRELAKWRLRKIRAGAAAVTMLQKTFRGYRSRRERERLFFEHPGRARKRVESAIVLQSLARRFLARVLERQIKTFRGLSVTNIQRIVRGKQNRKLFRLMRARAIIRRSISFFVARAFVSSLREARRVRAETRKKEAVVRSLQRIWRAKREIKRALVSMDMEMWRVGKLIIVQNAWRCYCARVELSRCRAFCENFIKAAIVVQSAFRMTVAMRYTVNLRQEYEIAVGTIQPVVRGMLARALAHRERALVNKAWAWLGIVPKEGNQMYARFLPKTTYSIRRGSLDNPPHSIATRTKNNSTSAKGNNVFSG----TSLVSGGLESLFGEKHFTNRFDRERTGKCTITEFKLGLGSFCQAVGYVLQRKEAQAISRRFFDGDASCAWSSFLRAYHEGAGESVACTRHSRLLCVSCVRHGRCEKAGCLCTKAHARRSEQLEFEMCKCGHPFEAHAVLRDSLPDEDGS-----DLHGSHVPSSEKLNSILAANVTVSGNDLPVHVEGCSMDSAL----------------------GVGKDEKVGGVLSP-----LSKKRRRTRILPRQQRCSNCSRERG-----TVRKSAETDNILTPTRLRHIQVASTSSTSKSPTSKG-----MKRLLEIRR----------------LPNIREAKAKDKERRSLSSAGLRGQAKRAALTEMNSVVQSSNVMEYSTIIQGNPAKNRVLEKQSMVRLAPQQSNKELR 1057
            EN++V FW+S+KA  PWTEAGAKA YAEERL A  EF+ ELD+AL I+KM++ G+HD AL RLMASTEGQMYH+FHKHR+ LEQ+G W+F P SV+R+ +   K+ D VE LR Y+AMRRDRF RIR LC QV++A + S+D +V V P +LI +  L ++ G  K+ P      ++ KKC WQ V+SK E   CTN+RM HP R F D+FGVL+HDTLATCGWHA+ CVS+ HG D VVISTANEGALCNECL Q+ KGP++N+TAF AP VR K K   + G  +T          PG   E  +                                               L+K + G  A   +Q+T+RGYR+R  R  +  EHP RA  RVESAIV+QSL RRFLAR L RQI  FR ++ T IQ++ RG Q R LFR  RAR +++R + F +ARA V+S + ARR+R E RKK AV  S QR WR K+  ++A +   + + R G                                    S  RM    R T  +R+E++ AV T+QP+VRG+LAR  A RERAL+ + W WLG      N +YARFLPK  Y + R S      S +     N  +   + +  G    +SLV   LE+L GE+HFT +FDR+RTG C+  EFK+GL SF +  GY LQ++EA  I +R+FDGD  CAW SFL +YH    +S AC RH RLLC  C+R                  ++QL F+MC+CGH F+AH ++        G      D  G  VP  + L+++L+  ++ +  D P++VEGCS  S L                      G       GG  +P      S+ RRR R     +   + + E       T    AE        R        + + + SPT+ G      K  L++ R                +P+ +EA++++KERR  S AG RGQA+RAAL EMNS VQ  N  +Y+  +Q + A N        + LAP  S KELR
Sbjct:   70 ENFEVGFWDSLKAVLPWTEAGAKADYAEERLDAHHEFQEELDEALRIRKMVETGLHDMALDRLMASTEGQMYHHFHKHRYQLEQTGEWTFVPPSVKRRWRHAVKKTDKVEKLRAYMAMRRDRFLRIRGLCRQVRNARLKSSDLLVTVEPESLIDENLLQVAGGGKKSKPANPFGGARLKKCHWQNVNSKGEQCFCTNNRMVHPHRLFKDEFGVLIHDTLATCGWHATRCVSNSHGDDPVVISTANEGALCNECLVQLTKGPIRNTTAFGAPGVRFKNK---RLGSADT---------DPGTGGEEFL-----------------------------------------------LQKEKNGERAARAVQRTYRGYRARHLRAMVALEHPLRALLRVESAIVMQSLVRRFLARTLVRQISAFRNMNATAIQKMARGMQARALFRRKRARKMVQRQMLFLLARAHVASAKVARRIREEMRKKNAVALSFQRAWRGKKGREKAAMLRAITVRRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIRMFADRRRTQKMRREFDGAVRTLQPLVRGLLARVTARRERALLGQVWGWLGTDTVTANGIYARFLPKNKYLVSRESAPLQQFSASQSASGNVDAGNYDELQKGLGSTSSLVRSTLEALPGERHFTEKFDRDRTGTCSKVEFKIGLESFLREAGYPLQKEEAALIVKRYFDGDGFCAWHSFLNSYHNAGSKSSACARHGRLLCTLCIR------------------TKQLGFKMCECGHVFDAHELVVGGSGPAKGETVRKQDQRGRVVPQKQ-LSALLSKGLSKTVVDRPINVEGCSAASNLRRAQYTNNSPSQAALISAQRPNGFRVTGARGGTKTPPHATTSSRARRRWRRQKPGRGSRSITEEASQPGGITALSLAELSPPFFGRRTSADGADGSGAAALSPTATGDVAGFPKENLDMVRPANQGATSPNKRKITYIPSFQEARSQEKERRDASCAGRRGQAERAALAEMNSAVQGKNAADYAAKLQDDIATN-TSRVDGRLCLAPVMSKKELR 1058          
BLAST of mRNA_F-serratus_M_contig124.1836.1 vs. uniprot
Match: A0A6H5JL35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL35_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 9.360e-64
Identity = 157/451 (34.81%), Postives = 224/451 (49.67%), Query Frame = 0
Query:  475 LSVTNIQRIVRGKQNRKLFRLMRARAIIRRSISFFVARAFVSSLREARRVRAETRKKEAVVRSLQRIWRAKREIKRALVSMDMEMWRVGKLIIVQNAWRCYCARVELSRCRAFCENFIKAAIVVQSAFRMTVAMRYTVNLRQEYEIAVGTIQPVVRGMLARALAHRERALVNKAWAWLGIVPKEGNQMYARFLPKTTYSIRRGSLD------NPPHSIATRTKNNSTSAKGN------------------------NVFSGTSLVSGGLESLFGEKHFTNRFDRERTGKCTITEFKLGLGSFCQAVGYVLQRKEAQAISRRFFDGDASCAWSSFLRAYHEGAGESVACTRHSRLLCVSCVRHGRCEKAGCLCTKAHARRSEQLEFEMCKCGHPFEAHAVLRDSLPDEDGS-----DLHGSHVPSSEKLNSILAANVTVSGNDLPVHVEGCS 890
            ++ T IQ++ RG Q R LFR  RA+ +++R + FF+ARA+V+S++ AR++R E RKK                                    V N W                     AA+ +QS  RM    R    +R+E++ AV  +QP+VRG+LAR  A RERAL+ + W WLG      N +YARFLPK  Y I R ++       + P S    T N++   K N                         +   +SLV   LE L GE+HFT +FDR++TG C+  EFK+GL SF + VGY LQ++EA  I +R+FDGD  CAW SFL +YH    +S AC+RH RLLC  C+R                  ++QL F+MC+CGH F+AH ++        G      D  G  VP  + L+++L+  ++ +  D P++VEGCS
Sbjct:    1 MNATAIQKMARGMQARALFRRKRAQVMVQRQMLFFLARAYVASVKVARKIREEMRKKN-----------------------------------VSNGWG--------------------AAVAMQSTIRMFADRRRAQKMRREFDGAVRILQPLVRGLLARIAARRERALLGQVWGWLGTDTATANGIYARFLPKNKYLISRENVALQQFSASHPASGHIGTGNDNDLQKVNAEVRQATAWCKCMCCLYFVVRPSQGLEPTSSLVRSTLEVLPGERHFTEKFDRDKTGTCSKVEFKIGLESFLREVGYPLQKEEAALIVKRYFDGDGFCAWHSFLNSYHNAGSKSSACSRHGRLLCTLCIR------------------TKQLGFKMCECGHVFDAHELVVGGSGPVKGETVRKQDQRGRVVPQKQ-LSALLSKGLSKTVVDRPINVEGCS 377          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig124.1836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1N7_ECTSI1.870e-21140.73C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JL35_9PHAE9.360e-6434.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 472..494
e-value: 120.0
score: 4.9
coord: 411..433
e-value: 11.0
score: 13.3
coord: 445..467
e-value: 7.6
score: 14.7
coord: 590..612
e-value: 53.0
score: 7.7
coord: 560..582
e-value: 240.0
score: 2.2
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 448..463
e-value: 0.067
score: 13.0
coord: 593..610
e-value: 0.14
score: 12.0
coord: 414..431
e-value: 0.038
score: 13.8
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 413..441
score: 8.114
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 476..499
score: 6.778
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 618..647
score: 6.778
NoneNo IPR availableGENE3D1.20.5.190coord: 588..646
e-value: 6.4E-7
score: 30.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig124contigF-serratus_M_contig124:720603..735133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig124.1836.1mRNA_F-serratus_M_contig124.1836.1Fucus serratus malemRNAF-serratus_M_contig124 720478..735243 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig124.1836.1 ID=prot_F-serratus_M_contig124.1836.1|Name=mRNA_F-serratus_M_contig124.1836.1|organism=Fucus serratus male|type=polypeptide|length=1142bp
MTRHDDRGDNDGSDDIRFSGSNESRSLSTKSSGPGSSSDQSSGSGSSVGS
RVQENYKVNFWESVKATFPWTEAGAKAAYAEERLVAVDEFRGELDQALLI
QKMIDAGMHDRALKRLMASTEGQMYHNFHKHRHALEQSGGWSFTPSSVQR
KLKTPTKRADAVENLRKYVAMRRDRFRRIRCLCDQVKSAIINSTDRIVPV
VPGNLIGKKTLAISEGMMKNTPQGDVSKRKKCKWQGVSSKSEVFTCTNDR
MEHPQRQFPDKFGVLVHDTLATCGWHASHCVSSVHGKDAVVISTANEGAL
CNECLAQIIKGPLKNSTAFSAPRVRLKRKNNIKHGEENTLVRNKWFTKAP
GRLRENAVCPRHPYAPPGAPPASVRPPAIFIPPPPSPPLLSVENLRQHRE
LAKWRLRKIRAGAAAVTMLQKTFRGYRSRRERERLFFEHPGRARKRVESA
IVLQSLARRFLARVLERQIKTFRGLSVTNIQRIVRGKQNRKLFRLMRARA
IIRRSISFFVARAFVSSLREARRVRAETRKKEAVVRSLQRIWRAKREIKR
ALVSMDMEMWRVGKLIIVQNAWRCYCARVELSRCRAFCENFIKAAIVVQS
AFRMTVAMRYTVNLRQEYEIAVGTIQPVVRGMLARALAHRERALVNKAWA
WLGIVPKEGNQMYARFLPKTTYSIRRGSLDNPPHSIATRTKNNSTSAKGN
NVFSGTSLVSGGLESLFGEKHFTNRFDRERTGKCTITEFKLGLGSFCQAV
GYVLQRKEAQAISRRFFDGDASCAWSSFLRAYHEGAGESVACTRHSRLLC
VSCVRHGRCEKAGCLCTKAHARRSEQLEFEMCKCGHPFEAHAVLRDSLPD
EDGSDLHGSHVPSSEKLNSILAANVTVSGNDLPVHVEGCSMDSALGVGKD
EKVGGVLSPLSKKRRRTRILPRQQRCSNCSRERGTVRKSAETDNILTPTR
LRHIQVASTSSTSKSPTSKGMKRLLEIRRLPNIREAKAKDKERRSLSSAG
LRGQAKRAALTEMNSVVQSSNVMEYSTIIQGNPAKNRVLEKQSMVRLAPQ
QSNKELRQGFAISDVVPFVTAGNLKVTTDPVGLYLIVLKTLSNEKNNLIE
DDRLFIDYVSRYDGSEMVGGLTQPPHIKPSCAHGAYLNVDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS