prot_F-serratus_M_contig124.1834.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig124.1834.1
Unique Nameprot_F-serratus_M_contig124.1834.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length129
Homology
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BLAST of mRNA_F-serratus_M_contig124.1834.1 vs. uniprot
Match: D7G1N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N8_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.470e-28
Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 0 
Query:    9 YHFRLAWKNLPGAVLISGANRDKAAPKSPPL---NRFTEYFLASVMSIAWALVFGITTFEKGDQWEYHYILVAWVLSLIARFEDYVSIVWLALTTAVFLQGIGAYSLRFL 115
            YH+ LAWK LPG  L  G    + A   PP    NR+ +Y  +  + + + ++F    + +GD+W+YHY+L+AW++SLIA F+DY+S+ WL +TT VFLQG+GAYS R L
Sbjct:   37 YHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMVYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVL 146
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BLAST of mRNA_F-serratus_M_contig124.1834.1 vs. uniprot
Match: A0A6H5JMR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR1_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 4.640e-27
Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 0 
Query:    9 YHFRLAWKNLPGAVLISGANRDKAAPKSPPL---NRFTEYFLASVMSIAWALVFGITTFEKGDQWEYHYILVAWVLSLIARFEDYVSIVWLALTTAVFLQGIGAYSLRFL 115
            YH+ LAWK LPG  L  G    + A   PP    NR+ +Y  +  + + + ++F    + +GD+W+YHY+L+AW++SLIA F+DY+S+ WL +TT VFLQG+GAYS R L
Sbjct:  165 YHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMLYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVL 274
[Close]
BLAST of mRNA_F-serratus_M_contig124.1834.1 vs. uniprot
Match: A0A6H5JIF9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIF9_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.040e-25
Identity = 54/111 (48.65%), Postives = 69/111 (62.16%), Query Frame = 0 
Query:    8 IYHFRLAWKNLPGAVLISGA---NRDKAAPKSPPLNRFTEYFLASVMSIAWALVFGITTFEKGDQWEYHYILVAWVLSLIARFEDYVSIVWLALTTAVFLQGIGAYSLRFL 115
            +YHF +AW  LPGAV+ISG      D  AP     NRF  Y   +V+  A+  +       +GD W YHY L+AWV+SLIA F+D  S+VWL +TT  FLQG+GAYS +FL
Sbjct:  136 VYHFFVAWTTLPGAVMISGGVSTPEDATAPVRSG-NRFARYMATAVLVAAFVALNAAFVHRRGDNWNYHYTLLAWVMSLIAIFDDPFSVVWLGVTTGAFLQGVGAYSFQFL 245
[Close]
BLAST of mRNA_F-serratus_M_contig124.1834.1 vs. uniprot
Match: D8LDF2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF2_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.930e-16
Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 0 
Query:    6 VLIYHFRLAWKNLPGAVLISGANRDKAAPKSPPLNRFTEYFLASVMSIAWALVFGITTFEKGDQWEYHYILVAWVLSLIARFEDYVSIVWLALTTAVFLQGIGAYS 111
            VL+ HF  AWK LPGA LISG    +   +   L+    Y  + ++ +A+ +++   +  + D W Y   L+AWVLSL A+F+ ++S+ WLA+TT VFLQGIG  S
Sbjct:  161 VLLLHFAEAWKVLPGAHLISGVGVPRVEVREDLLSI---YVASRMLILAYFILYAAFSVARDDGWGYQLYLLAWVLSLFAQFKSFISVFWLAVTTGVFLQGIGNQS 263
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig124.1834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1N8_ECTSI1.470e-2845.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMR1_9PHAE4.640e-2745.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIF9_9PHAE1.040e-2548.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDF2_ECTSI2.930e-1641.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..64
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availableTMHMMTMhelixcoord: 45..64
NoneNo IPR availableTMHMMTMhelixcoord: 90..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig124contigF-serratus_M_contig124:699758..700144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig124.1834.1mRNA_F-serratus_M_contig124.1834.1Fucus serratus malemRNAF-serratus_M_contig124 698728..700642 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig124.1834.1 ID=prot_F-serratus_M_contig124.1834.1|Name=mRNA_F-serratus_M_contig124.1834.1|organism=Fucus serratus male|type=polypeptide|length=129bp
MVLLAVLIYHFRLAWKNLPGAVLISGANRDKAAPKSPPLNRFTEYFLASV
MSIAWALVFGITTFEKGDQWEYHYILVAWVLSLIARFEDYVSIVWLALTT
AVFLQGIGAYSLRFLSPWRFGEDEFEDS*
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