prot_F-serratus_M_contig1239.1810.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1239.1810.1
Unique Nameprot_F-serratus_M_contig1239.1810.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length166
Homology
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: D7FN46_ECTSI (50S ribosomal protein L5, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN46_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 2.230e-112
Identity = 162/165 (98.18%), Postives = 163/165 (98.79%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIVTG 165
            MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDF+VVLNRPGYRVAKRK K AKIGYQHKVTKTDAVKWFQAKFEGIVTG
Sbjct:    9 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 173
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A0D3AUD9_BRAOL (Uncharacterized protein n=10 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3AUD9_BRAOL)

HSP 1 Score: 275 bits (703), Expect = 1.990e-92
Identity = 131/163 (80.37%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRA+KVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A0J8BKL6_BETVV (Uncharacterized protein n=6 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0J8BKL6_BETVV)

HSP 1 Score: 275 bits (703), Expect = 1.990e-92
Identity = 131/163 (80.37%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQ+PVYSKARYTVRSFGIRRNEKIAC+VTVRG+KA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A1S4CT55_TOBAC (60S ribosomal protein L11-1-like n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CT55_TOBAC)

HSP 1 Score: 274 bits (701), Expect = 3.880e-92
Identity = 131/163 (80.37%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MR++KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A3P6F0I7_BRAOL (Uncharacterized protein n=4 Tax=Brassica TaxID=3705 RepID=A0A3P6F0I7_BRAOL)

HSP 1 Score: 274 bits (700), Expect = 4.050e-92
Identity = 130/163 (79.75%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRA+KVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:    1 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 163
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A0K9NLH5_ZOSMR (60S ribosomal protein L11a n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NLH5_ZOSMR)

HSP 1 Score: 274 bits (700), Expect = 5.320e-92
Identity = 129/163 (79.14%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MR++KV KLVLN SVGESGDRLTRA+KVLEQL+GQSPV+SKAR+TVRSFGIRRNEKIACHVTVRG+KA++++E GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   10 MREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARFTVRSFGIRRNEKIACHVTVRGEKAMQLIESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRAKARVGIQHRVTKDDAMKWFQVKYEGVI 172
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: UPI00053C97D5 (60S ribosomal protein L11-1-like isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C97D5)

HSP 1 Score: 273 bits (699), Expect = 8.370e-92
Identity = 130/163 (79.75%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRG+KA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   12 MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDAMKWFQVKYEGVI 174
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A394D9K8_LUPAN (Uncharacterized protein n=5 Tax=Pentapetalae TaxID=1437201 RepID=A0A394D9K8_LUPAN)

HSP 1 Score: 273 bits (698), Expect = 1.110e-91
Identity = 130/163 (79.75%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MR++KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRV +R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A2G3C1E5_CAPCH (60S ribosomal protein L11 n=6 Tax=Spermatophyta TaxID=58024 RepID=A0A2G3C1E5_CAPCH)

HSP 1 Score: 273 bits (698), Expect = 1.410e-91
Identity = 130/163 (79.75%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRG+KA+++LE GLKVKEYEL R+NFS TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   +++G QH+VTK DA+KWFQ K+EG++
Sbjct:   18 MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVI 180
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Match: A0A1J3EML2_NOCCA (60S ribosomal protein L11-1 (Fragment) n=4 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3EML2_NOCCA)

HSP 1 Score: 274 bits (700), Expect = 1.430e-91
Identity = 130/163 (79.75%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRA+KVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   38 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 200
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1239.1810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN46_ECTSI2.230e-11298.1850S ribosomal protein L5, chloroplastic n=2 Tax=Ec... [more]
A0A0D3AUD9_BRAOL1.990e-9280.37Uncharacterized protein n=10 Tax=Brassicaceae TaxI... [more]
A0A0J8BKL6_BETVV1.990e-9280.37Uncharacterized protein n=6 Tax=Chenopodiaceae Tax... [more]
A0A1S4CT55_TOBAC3.880e-9280.3760S ribosomal protein L11-1-like n=4 Tax=Nicotiana... [more]
A0A3P6F0I7_BRAOL4.050e-9279.75Uncharacterized protein n=4 Tax=Brassica TaxID=370... [more]
A0A0K9NLH5_ZOSMR5.320e-9279.1460S ribosomal protein L11a n=1 Tax=Zostera marina ... [more]
UPI00053C97D58.370e-9279.7560S ribosomal protein L11-1-like isoform X1 n=2 Ta... [more]
A0A394D9K8_LUPAN1.110e-9179.75Uncharacterized protein n=5 Tax=Pentapetalae TaxID... [more]
A0A2G3C1E5_CAPCH1.410e-9179.7560S ribosomal protein L11 n=6 Tax=Spermatophyta Ta... [more]
A0A1J3EML2_NOCCA1.430e-9179.7560S ribosomal protein L11-1 (Fragment) n=4 Tax=Noc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031310Ribosomal protein L5, N-terminalPFAMPF00281Ribosomal_L5coord: 1..52
e-value: 2.9E-18
score: 65.9
IPR002132Ribosomal protein L5PIRSFPIRSF002161RPL5p_RPL5a_RPL11e_RPL5ocoord: 1..162
e-value: 1.9E-41
score: 139.5
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 1..163
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 1..165
e-value: 6.4E-81
score: 272.3
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 1..163
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 56..153
e-value: 6.9E-22
score: 77.4
NoneNo IPR availablePANTHERPTHR11994:SF1960S RIBOSOMAL PROTEIN L11-2coord: 1..163
IPR020929Ribosomal protein L5, conserved sitePROSITEPS00358RIBOSOMAL_L5coord: 29..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1239contigF-serratus_M_contig1239:111271..113283 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1239.1810.1mRNA_F-serratus_M_contig1239.1810.1Fucus serratus malemRNAF-serratus_M_contig1239 111105..113307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1239.1810.1 ID=prot_F-serratus_M_contig1239.1810.1|Name=mRNA_F-serratus_M_contig1239.1810.1|organism=Fucus serratus male|type=polypeptide|length=166bp
MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFG
IRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQE
HIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTD
AVKWFQAKFEGIVTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031310Ribosomal_L5_N
IPR002132Ribosomal_L5
IPR022803Ribosomal_L5_dom_sf
IPR031309Ribosomal_L5_C
IPR020929Ribosomal_L5_CS