prot_F-serratus_M_contig1239.1808.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1239.1808.1
Unique Nameprot_F-serratus_M_contig1239.1808.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length212
Homology
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: D7FN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN49_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 4.760e-53
Identity = 88/183 (48.09%), Postives = 124/183 (67.76%), Query Frame = 0
Query:   16 ALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAYSVHQQLCKHRMMTGSRSPTEDSRQISEDRLGPHISS-VHPVDQYEFKS 197
            ++V  ++D+++ GVR +DS  WD+HQ  LSP +FS+R   ELG+  SF+ P+AQSI +QL+++    P W  +GT+A A E++Q + ID+RFRS+I+RDR+QWDVNC  NSPE FAR TVADL LPQEME  IA + HQQ+ + RM   S +   +  Q   D  GP +SS ++    YE K+
Sbjct:   11 SVVCCNVDVEIGGVRFVDSVMWDIHQSSLSPLEFSRRTCAELGIGVSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTTHQQVSRFRMAAPSSTTNNEDAQFK-DVEGPCVSSALNSSSLYEVKA 192          
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: A0A484E0B6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0B6_BRELC)

HSP 1 Score: 115 bits (288), Expect = 1.910e-26
Identity = 72/204 (35.29%), Postives = 106/204 (51.96%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAYSVHQQLCKHRMMTGSRSPTEDSRQIS-----EDRL-----GPHISSVHPVDQYEFKSRDWSDHRPLSKPT 210
            L+PI +DIDV+G R IDSF+W+L++   + E F+  ++ +L L   F   +A S+  Q+   + A+P W      A   E L  I I++R    IY DR +WD+N  NNSPE FA+    DL L  E EA +A S+ +QL  +  +         +R  S      DRL     GP +  +   D  +F+  D+   RPLS+PT
Sbjct:  139 LIPIRLDIDVEGYRYIDSFSWNLYEKDFTYETFAAALVRDLDLPNCFYERIATSLREQVQKAQKALP-WHE----AVTRESLHPIFINLRLNDAIYIDRFEWDLNDPNNSPECFAQVVCEDLGLSGEFEAQVALSIREQLYDYSRLIREGLKDRITRLPSVTAALRDRLDAEAWGPSVKYILADDIPQFEREDFKRMRPLSRPT 337          
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: A0A0P1B619_PLAHL (Swi snf-related matrix-associated actin-dependent regulator of n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B619_PLAHL)

HSP 1 Score: 115 bits (287), Expect = 2.440e-26
Identity = 70/211 (33.18%), Postives = 110/211 (52.13%), Query Frame = 0
Query:   10 WDVRREALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAYSVHQQLCKHRMMTGSRSPTEDSR-----QISEDRL-----GPHISSVHPVDQYEFKSRDWSDHRPLSKPT 210
            +  R E L+PI +DID++G R IDSF+W+LH+ + + E F+  ++ +L L   F   + +SI  Q+   ++ +P W      A   E L  I I++R    IY DR +WD+N  +NSPE FA+    DL L  E EA +A S+ +QL  +  +       + S+      +  DRL     GP +  +   D  + +  D+   RPLS+PT
Sbjct:  130 FPTRDELLIPIRLDIDIEGYRFIDSFSWNLHEKEFTFETFAAALVRDLDLPNCFYQRITKSIQEQVHKAQAVLP-WHE----AVTGESLHPIYINLRLCDTIYTDRFEWDLNNTSNSPERFAQVVCEDLGLSGEFEAQVALSIREQLHDYSKLIREGFKDKVSQLPSVTAVFRDRLDVEVWGPSVKYILADDIPQLEREDFKRMRPLSRPT 335          
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: A0A329S0R6_9STRA (Uncharacterized protein n=39 Tax=Phytophthora TaxID=4783 RepID=A0A329S0R6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.270e-25
Identity = 69/211 (32.70%), Postives = 107/211 (50.71%), Query Frame = 0
Query:   10 WDVRREALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAYSVHQQLCKHRMMTGSRSPTEDSR----------QISEDRLGPHISSVHPVDQYEFKSRDWSDHRPLSKPT 210
            +  R   L+PI +DIDV+G R IDSF+W+L++   + E F+  ++ +L L   F   +A+SI  Q+   + ++P W      A   E L  I I++R    IY DR +WD+N  NNSPE FA+    DL L  E EA +A S+ +QL  +  +         SR          ++  +  GP +  +   D  + +  D+   RPLS+PT
Sbjct:  128 FPTRDTLLIPIRLDIDVEGYRYIDSFSWNLYEKDFTYETFAAALVRDLDLPNCFYKRIAKSIREQVEKAKKSLP-WNE----AVTGESLHPIFINLRLNDTIYIDRFEWDLNNPNNSPERFAQVVCEDLGLSGEFEAQVALSIREQLRDYSRLIREGLKDRVSRLPPVTAAFRDRLDAEAWGPSVKYILADDIPQLEREDFKRMRPLSRPT 333          
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: A0A3M6VHY7_9STRA (HMG box domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHY7_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.380e-25
Identity = 73/223 (32.74%), Postives = 112/223 (50.22%), Query Frame = 0
Query:    5 AQALLWD-----VRREALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAYSVHQQLCKHRMMTGSRSPTEDS-------RQISEDRL-----GPHISSVHPVDQYEFKSRDWSDHRPLSKPT 210
            AQ  L+D      R   L+PI +DID++G R IDSF+W+ ++   + E F+  ++ +L L   F   +A+SI  Q+   + ++P W      A   E L  I I++R    IY D+ +WD+N  NNSPE FAR    DL L  + EA +A ++ +QL  +  +   R   +DS            DRL     GP +  +   D  + +  D+   RPLS+PT
Sbjct:    4 AQRKLYDYPKFPARDTLLIPIGLDIDIEGYRYIDSFSWNFYEKDFTYETFAAALVRDLDLPDCFYKRIAKSIQEQVEKAQKSLP-WHE----AVTSESLHPIFINLRLNDTIYIDKFEWDLNDPNNSPEQFARVVCEDLGLSGQFEAQVALTIREQLRDYSRLI--REGLKDSVTRLPPVTTAFRDRLDTKVWGPSVKFILAEDIPQLEREDFKRMRPLSRPT 219          
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: V9F6J2_PHYPR (HTH cro/C1-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=V9F6J2_PHYPR)

HSP 1 Score: 109 bits (273), Expect = 5.590e-25
Identity = 67/204 (32.84%), Postives = 103/204 (50.49%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAYSVHQQLCKHRMMTGSRSPTEDSR----------QISEDRLGPHISSVHPVDQYEFKSRDWSDHRPLSKPT 210
            L+PI +DIDV+G R IDSF+W+ ++   + E F+  ++ +L L   F   +A+SI  Q+   +  +P W      A   E L  I I++R    IY DR +WD+N  NNSPE FA+    DL L  E EA +A S+ +QL  +  +         SR          ++  +  GP +  +   D  + +  D+   RPLS+PT
Sbjct:  138 LIPIRLDIDVEGYRYIDSFSWNFYEKDFTYETFAAALVRDLDLPNCFYKRIAKSIQEQVEKAQKLLP-WSE----AVTGESLHPIFINLRLNDTIYIDRFEWDLNNPNNSPERFAQVVCEDLGLSGEFEAQVALSIREQLRDYSRLIREGLKDRVSRLPPVTAAFRDRLDAEAWGPSVKYILADDIPQLEREDFKRMRPLSRPT 336          
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: M4BLY5_HYAAE (HMG box domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLY5_HYAAE)

HSP 1 Score: 104 bits (260), Expect = 1.580e-22
Identity = 72/233 (30.90%), Postives = 111/233 (47.64%), Query Frame = 0
Query:   10 WDVRREALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAYSVHQQL-----------------------CKHRMMT-GSRSPTEDSRQIS---EDRL-----GPHISSVHPVDQYEFKSRDWSDHRPLSKPT 210
            +  R   L+PI +DID++G R IDSF+W+L++   + E F+  ++ +L L   F   +A+SI  Q+   +   P W      A   E L  I I++R    IY DR +WD+N  NNSPE FAR    DL L  E EA +A  + +QL                       C+++++  G +S       +S    DRL     GP +  +   D  + +  D+   RPL++PT
Sbjct:  132 FPTRDTLLIPIRLDIDIEGYRYIDSFSWNLYEKDFTYETFAAALVRDLDLPDCFYKRIAKSIQEQVEKAQRLFP-WHE----AVTSESLHPIYINLRLNDTIYIDRFEWDLNDSNNSPEQFARVVCEDLGLHGEFEAQVALIIREQLRDYSRVSISSCIDTIRNIADAYSCRYQLIREGLKSRVSKLPPVSAAFRDRLETKVWGPSVKFILADDIPQLEREDFKRMRPLTRPT 359          
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: A0A0W8CBZ9_PHYNI (Chromatin structure-remodeling complex protein BSH n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CBZ9_PHYNI)

HSP 1 Score: 102 bits (254), Expect = 5.060e-22
Identity = 71/227 (31.28%), Postives = 108/227 (47.58%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAYSVHQQL---------CKHRMMTGSRSPTEDS-----RQISEDRL-------------------GPHISSVHPVDQYEFKSRDWSDHRPLSKPT 210
            L+PI +DIDV+G R IDSF+W+ ++   + E F+  ++ +L L   F   +A+SI  Q+   +  +P W      A   E L  I I++R    IY DR +WD+N  NNSPE FA+    DL L  E EA +A S+ +QL         C   M   S    +++     R+  +DR+                   GP +  +   D  + +  D+   RPLS+PT
Sbjct:  101 LIPIRLDIDVEGYRYIDSFSWNFYEKDFTYETFAAALVRDLDLPNCFYKRIAKSIQEQVEKAQKLLP-WSE----AVTGESLHPIFINLRLNDTIYIDRFEWDLNNPNNSPERFAQVVCEDLGLSGEFEAQVALSIREQLRDYSRVSKQCDLLMPEWSADVVDNAIEQLIREGLKDRVSRLPPVTAAFRDRLDAEAWGPSVKYILADDIPQLEREDFKRMRPLSRPT 322          
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: A0A2D4BHJ2_PYTIN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHJ2_PYTIN)

HSP 1 Score: 102 bits (254), Expect = 1.140e-21
Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAYSVHQQL 156
            L+PI +D+DV+G R IDSF W+LH+   + E F+  ++++L L   F+  +A SI  Q+   + +MP W      A   E L  I I++R +  +Y DR +WD++   N PE+FA+    DL L  E EA IA S+ +QL
Sbjct:  123 LIPIRLDVDVEGHRFIDSFAWNLHEKDFTYETFAASLVQDLDLPECFLKRIAASIEAQVEKAKRSMP-WXD----AMNTESLHPIFINLRLQDTLYMDRFEWDLSDPRNDPELFAQTVCDDLGLSGEFEAQIALSIREQL 257          
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Match: A0A097PLQ6_9LILI (Bushy growth protein (Fragment) n=1 Tax=Lilium brownii TaxID=82312 RepID=A0A097PLQ6_9LILI)

HSP 1 Score: 97.4 bits (241), Expect = 2.250e-21
Identity = 56/173 (32.37%), Postives = 96/173 (55.49%), Query Frame = 0
Query:   15 EALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQ-EMEAPIAYSVHQQLCKHRMMTGSRSPTEDSRQISEDRLGPHISS 186
            E LVPI IDI+VDG R  D+FTW+ +        F+KR +++L L  +F+  ++QS+  QL +FRS       +G    ++E +  + +D+R  + I RD+  WD+N   + PE FAR    D+++   E+   IA+++ +QL  + +   S S   +SR   + R   +I++
Sbjct:    8 ENLVPIRIDIEVDGQRFKDAFTWNPNDPDSEVVNFAKRTVKDLKLPATFVTHISQSVQTQLAEFRSF------EGQEMPSKEKIVPLKLDLRVNNTIIRDQFLWDINNFESDPEEFARIFCKDMDISDPEIGPAIAFAIREQL--YELAVQSASTARESRLAKKGRRAENITN 172          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1239.1808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN49_ECTSI4.760e-5348.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A484E0B6_BRELC1.910e-2635.29Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0P1B619_PLAHL2.440e-2633.18Swi snf-related matrix-associated actin-dependent ... [more]
A0A329S0R6_9STRA1.270e-2532.70Uncharacterized protein n=39 Tax=Phytophthora TaxI... [more]
A0A3M6VHY7_9STRA5.380e-2532.74HMG box domain-containing protein n=2 Tax=Peronosp... [more]
V9F6J2_PHYPR5.590e-2532.84HTH cro/C1-type domain-containing protein n=2 Tax=... [more]
M4BLY5_HYAAE1.580e-2230.90HMG box domain-containing protein n=1 Tax=Hyaloper... [more]
A0A0W8CBZ9_PHYNI5.060e-2231.28Chromatin structure-remodeling complex protein BSH... [more]
A0A2D4BHJ2_PYTIN1.140e-2138.57SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A097PLQ6_9LILI2.250e-2132.37Bushy growth protein (Fragment) n=1 Tax=Lilium bro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006939SNF5/SMARCB1/INI1PFAMPF04855SNF5coord: 100..160
e-value: 1.5E-13
score: 51.1
coord: 14..79
e-value: 2.3E-15
score: 57.1
IPR006939SNF5/SMARCB1/INI1PANTHERPTHR10019SNF5coord: 14..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1239contigF-serratus_M_contig1239:89808..96720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1239.1808.1mRNA_F-serratus_M_contig1239.1808.1Fucus serratus malemRNAF-serratus_M_contig1239 89701..97257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1239.1808.1 ID=prot_F-serratus_M_contig1239.1808.1|Name=mRNA_F-serratus_M_contig1239.1808.1|organism=Fucus serratus male|type=polypeptide|length=212bp
MPLPAQALLWDVRREALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFS
KRMIEELGLSRSFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEEDLQL
IDIDIRFRSIIYRDRMQWDVNCLNNSPEIFARCTVADLELPQEMEAPIAY
SVHQQLCKHRMMTGSRSPTEDSRQISEDRLGPHISSVHPVDQYEFKSRDW
SDHRPLSKPTH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006939SNF5