prot_F-serratus_M_contig1235.1780.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1235.1780.1
Unique Nameprot_F-serratus_M_contig1235.1780.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length830
Homology
BLAST of mRNA_F-serratus_M_contig1235.1780.1 vs. uniprot
Match: A0A6H5J9W3_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W3_9PHAE)

HSP 1 Score: 654 bits (1688), Expect = 1.890e-217
Identity = 448/919 (48.75%), Postives = 507/919 (55.17%), Query Frame = 0
Query:    1 MEALKEKLIRSDFERVSKNPRFQQTSNVQTKNGSIFVWMLAVPGGRGTSWEGLVYDLEITFSRRHPFEPPRVDFPRTHRNVSNPRHPLVDGSGRLRMQKLSFDKWLPTIEASTVIGWLYHLFETEPPSVTSGNKCPFTHLSCETVLQVHTFLDAGDLGCLSQTGKHMLSLCFAEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGVSGKWFWEGSREAFIRSWEMRKACYGRAFSTAKTQKAHIMWELGGLMTVAAGLLSDVTSRPMHLGGVAGNSAQLRHMEYLLDSQAMRIASLQRLLAWPAVCRSLLGEKEDDSSLPIGLWDQPGVFSDGSKGGRRRALDGP---------TSAWSAVGESLAATELGELNGREARLTKEQRDAMCLLCANLAAFPLRPRLRSRRSRWYPAEGGTWSTPASGLTAGTGGGLRARIRGQEGGAGAWPAEDASETAAECSPHHHHVVTGPAIPYGMDRVELPAR------------DSWLTRNPAPGPGGAXXXXXXXXXXXXAADNPPPACGLGGLCWPTLYDLTMVKRRQRERLRDCFRRFFRGQKLDVRDPSGEWMGAVVLWAPPVCARSIPVPAPTLVTLATHGHGXXXXG----------ANAGGVAGAAGGGVDP---------PHGGIDLTGSDTITPEWRRLLQLALLADGG----HMNVNQGGXXXXXXXXXXXXXXXXXXXXVAPVPQAPNAAGFNGGD-----------------WVTTGIPDGAQSFLASAV------------------------------AAAADSRPWPPPTPPQPSGNSTHRGAMLAGVEAASISSNGGSLTTMGGMGASSGSMIGGRPSGGGGNTVLIHYEGHKSRYDEWIAVGSPRLAPYRSRSARPLSVTMQSVQRLVKGMSVRCARG 828
            MEALKE+L+R DF+ V ++P++Q T+NV+T+ GSI  W+L VPGG+GTSWEGLVYDL++TFSRRHPFEPPRVDFPRTHRNVSNP HPLVD +G LRMQKLS DKWLPTIEAS VI WL+HLFETEPP VTSGN CPFTHLS ETVLQVH FLDAGDLG LSQT KHMLSLCF EATWAKLYYRSCTSLDGLLGEKEGGACPVRVMG SGKWFWEGSREAFIRSWEMRKAC   AFSTAKTQ+ H+ WEL GL+TVAAGLL D+  R +     A N+  LRHME +LDS  MR+ASLQRL+AWP VCR LL EK++D SLPI  W +PG         RR     P          +               + +GREARLT EQR+AM LL  NLAA P+     +RR                                             + T  E  P+HHH V GP IPYGM RVELPAR                           XXXXXXXX       N  PACG+GGL WPTLYDLT  KRRQRERLR+CFR+F RGQ+LDV DPSG WMGA V+WAP               TL   G G               A A  VAG                 P  G  + G+  + PEWRR+LQL L+AD G    H N     XXXXXXXXXXXXXXXXXXXX                                  WVTT  P  +QS                                    A AA                                         + G G ++       P G     V +HYEGHK +YDEWI+V S RLAP+RSR+ RPLSVTMQ V+++VKG SV  +RG
Sbjct:  104 MEALKEQLLRDDFDEVRQHPKYQ-TANVRTEEGSILKWILDVPGGKGTSWEGLVYDLKVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGCLRMQKLSPDKWLPTIEASQVISWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHAFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIRSWEMRKACSSAAFSTAKTQELHVKWELSGLLTVAAGLLYDIQDRRLGDAFPAANAGYLRHMERVLDSLTMRVASLQRLMAWPGVCRGLLSEKDEDRSLPIDAWGRPGQQ-------RRSPSPSPXXHEKHHRCNAGADXXXXXXXXXXXXDSSGREARLTPEQREAMRLLFGNLAALPV-----ARRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATARTPPEGFPYHHHTVAGPCIPYGMGRVELPARVGGEPPQVLAAXXXXXXXXXXXXXXXXXXXXXXXXSGCATLQNAQPACGMGGLFWPTLYDLTAAKRRQRERLRECFRKFSRGQRLDVLDPSGVWMGAEVMWAPGDGGVG---------TLRVGGWGEDGGAXXXXXXXXXXAPAAEVAGXXXXXXXXXXXXXXXXXPLAGYPVGGNGGM-PEWRRVLQLGLMADSGQAAPHPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVTTEAPKASQSLXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANWNPGAGAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFGQGGTT-------PPGSNRKLVRVHYEGHKKKYDEWISVQSGRLAPFRSRTTRPLSVTMQFVEQVVKGASVSSSRG 992          
BLAST of mRNA_F-serratus_M_contig1235.1780.1 vs. uniprot
Match: D7FVT1_ECTSI (Ubiquitin-conjugating enzyme E2W n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT1_ECTSI)

HSP 1 Score: 624 bits (1608), Expect = 1.070e-211
Identity = 395/857 (46.09%), Postives = 446/857 (52.04%), Query Frame = 0
Query:    1 MEALKEKLIRSDFERVSKNPRFQQTSNVQTKNGSIFVWMLAVPGGRGTSWEGLVYDLEITFSRRHPFEPPRVDFPRTHRNVSNPRHPLVDGSGRLRMQKLSFDKWLPTIEASTVIGWLYHLFETEPPSVTSGNKCPFTHLSCETVLQVHTFLDAGDLGCLSQTGKHMLSLCFAEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGVSGKWFWEGSREAFIRSWEMRKACYGRAFSTAKTQKAHIMWELGGLMTVAAGLLSDVTSRPMHLGGV--AGNSAQLRHMEYLLDSQAMRIASLQRLLAWPAVCRSLLGEKEDDSSLPIGLWDQPGVFSDGSKGGRRRALDGPTSAWSAVGESLAATELGELNGREARLTKEQRDAMCLLCANLAAFPLRPRLRSRRSRWYPAEGGTWSTPASGLTAGTGGGLRARIRGQEGGAGAWPAEDASETAAECSPHHHHVVTGPAIPYGMDRVELPARDSWLTRNPAPGPGGAXXXXXXXXXXXXAADNPPPACGLGGLCWPTLYDLTMVKRRQRERLRDCFRRFFRGQKLDVRDPSGEWMGAVVLWAPPVCARSIPVPAPTLVTLATHGHGXXXXGANAGGVAGAAGGGVDP--------------------------PHGGIDLTGSDTITPEWRRLLQLALLADGGHMNVNQGGXXXXXXXXXXXXXXXXXXXXVAPVPQAPNAAGFNGGDWVT-TGIPDGAQSFLASAVAAAADSRPWPPPTPPQPSGNSTHRGAMLAGVEAASISSNGGSLTTMGGMGASSGSMIGGRPSGGGGNTVLIHYEGHKSRYDEWIAVGSPRLAPYRSRSARPLSVTMQSVQRLVKGMSV-RCAR 827
            MEALKEKL+RSDF++V ++P++Q T+NV+T+ GSIF W+L VPGG+GTSWEGLVYDLE+TFSRRHPFEPPRVDFPRTHRNVSNP HPLVD +GRLRMQKLSFDKWLPTIEAS VIGWL+HLFETEPP VTSGN CPFTHLS ETVLQVHTFLDAGDLG LSQT KHMLSLCF EATWAKLYYRSCTSLDGLLGEKEGGACPVRVMG SGKWFWEGSREAFIRSWEMRKAC   AFSTAKTQ+ H+ WEL GL+TVAAGLL D+ +R   LG V  A N+  LRHME +LDS  MR+ASLQRL+AWP VCR LL EK++D SLPI +W +PG         +RR+     S      E     EL       AR+  E    +                           G  W+T                                                                                              N  PACG+GGL WPTLYDL   KRRQRERLR+CFR+F RGQKLDVRDPSG WMGA V+WAP                      G    G       G  GG                              P  G  + G D   PEWRRLLQL L+ADGG                              P    P  A +N G   T   +P G                                          A +   GG+                  P G     V +HYEGHK +YDEWI+V S RLAP+RSR+ RPLSVTMQ V+++V G SV RC R
Sbjct:    1 MEALKEKLLRSDFDQVRQHPKYQ-TANVRTEEGSIFKWILDVPGGKGTSWEGLVYDLEVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGRLRMQKLSFDKWLPTIEASQVIGWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIRSWEMRKACSSAAFSTAKTQELHVKWELSGLLTVAAGLLHDIQNR--RLGDVFPAANAGYLRHMERVLDSLTMRVASLQRLMAWPGVCRGLLSEKDEDGSLPIDVWGRPGQ--------QRRS----PSXXXXXHEKQHRVEL------PARVGGEPPQVLAXXXXXXXXXXXXXXXXXXXXXXXXXSG--WAT--------------------------------------------------------------------------------------------LQNAQPACGMGGLFWPTLYDLMAAKRRQRERLRECFRKFSRGQKLDVRDPSGVWMGAEVMWAP----------------------GDGGVGTLRADGCGEDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFAGSPV-GGDAGMPEWRRLLQLGLMADGGR---------------------------ALPGSPPPALANWNPGAGATLAAVPAGXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXALVFGQGGTT-----------------PPGSNRKLVRVHYEGHKKKYDEWISVQSGRLAPFRSRTTRPLSVTMQFVEQVVNGASVSRCQR 670          
BLAST of mRNA_F-serratus_M_contig1235.1780.1 vs. uniprot
Match: UPI00174F60B0 (SUMO-conjugating enzyme UBC9-like n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=UPI00174F60B0)

HSP 1 Score: 55.1 bits (131), Expect = 3.960e-5
Identity = 39/110 (35.45%), Postives = 54/110 (49.09%), Query Frame = 0
Query:   28 VQTKNG----SIFVWMLAVPGGRGTSWEGLVYDLEITFSRRHPFEPPRVDFPRTHRNVSNPRHPLVDGSGRLRMQKLSFDK-WLPTIEASTVIGWLYHLFETEPPSVTSG 132
            V TKN     ++  W  AVPG RGT+WEG ++ L ++F   +PF PP   F      V    HP V  SG + +  L+ DK W P I    V+  +  L + EP +  S 
Sbjct:   27 VPTKNRDGTLNLMKWKCAVPGKRGTAWEGGLFKLRLSFKEDYPFSPPTCQF------VPPLFHPNVYPSGVVCLSILNEDKDWRPGITIKQVLLGIQDLLD-EPNTQDSA 129          
BLAST of mRNA_F-serratus_M_contig1235.1780.1 vs. uniprot
Match: A0A7R9YNM5_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNM5_DIALT)

HSP 1 Score: 54.3 bits (129), Expect = 5.490e-5
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 0
Query:   34 SIFVWMLAVPGGRGTSWEGLVYDLEITFSRRHPFEPPRVDFPRTHRNVSNPR--HPLVDGSGRLRMQKLSFDK-WLPTIEASTVI 115
            +I +W  AVPG +GT WEG +Y + + FS  +P +PP+  F        NPR  HP V  SG + +  L  +K W P+I    ++
Sbjct:   41 NIMLWECAVPGKKGTDWEGGLYRITMEFSDEYPSKPPKCKF--------NPRIFHPNVYPSGTICLSILDENKGWKPSITVKQML 117          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1235.1780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J9W3_9PHAE1.890e-21748.75UBC core domain-containing protein n=1 Tax=Ectocar... [more]
D7FVT1_ECTSI1.070e-21146.09Ubiquitin-conjugating enzyme E2W n=1 Tax=Ectocarpu... [more]
UPI00174F60B03.960e-535.45SUMO-conjugating enzyme UBC9-like n=1 Tax=Pipistre... [more]
A0A7R9YNM5_DIALT5.490e-536.47Hypothetical protein (Fragment) n=2 Tax=Diacronema... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..150
e-value: 0.002
score: 12.4
NoneNo IPR availableGENE3D2.30.30.140coord: 767..798
e-value: 1.1E-7
score: 33.7
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 3..127
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 10..126
e-value: 6.8E-14
score: 51.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 7..128
score: 16.145
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 3..140
e-value: 4.0E-14
score: 54.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 8..128
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 769..799
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 130..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1235contigF-serratus_M_contig1235:167698..189627 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1235.1780.1mRNA_F-serratus_M_contig1235.1780.1Fucus serratus malemRNAF-serratus_M_contig1235 167698..189627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1235.1780.1 ID=prot_F-serratus_M_contig1235.1780.1|Name=mRNA_F-serratus_M_contig1235.1780.1|organism=Fucus serratus male|type=polypeptide|length=830bp
MEALKEKLIRSDFERVSKNPRFQQTSNVQTKNGSIFVWMLAVPGGRGTSW
EGLVYDLEITFSRRHPFEPPRVDFPRTHRNVSNPRHPLVDGSGRLRMQKL
SFDKWLPTIEASTVIGWLYHLFETEPPSVTSGNKCPFTHLSCETVLQVHT
FLDAGDLGCLSQTGKHMLSLCFAEATWAKLYYRSCTSLDGLLGEKEGGAC
PVRVMGVSGKWFWEGSREAFIRSWEMRKACYGRAFSTAKTQKAHIMWELG
GLMTVAAGLLSDVTSRPMHLGGVAGNSAQLRHMEYLLDSQAMRIASLQRL
LAWPAVCRSLLGEKEDDSSLPIGLWDQPGVFSDGSKGGRRRALDGPTSAW
SAVGESLAATELGELNGREARLTKEQRDAMCLLCANLAAFPLRPRLRSRR
SRWYPAEGGTWSTPASGLTAGTGGGLRARIRGQEGGAGAWPAEDASETAA
ECSPHHHHVVTGPAIPYGMDRVELPARDSWLTRNPAPGPGGAAVAAAAAD
AAPAAADNPPPACGLGGLCWPTLYDLTMVKRRQRERLRDCFRRFFRGQKL
DVRDPSGEWMGAVVLWAPPVCARSIPVPAPTLVTLATHGHGHAHGGANAG
GVAGAAGGGVDPPHGGIDLTGSDTITPEWRRLLQLALLADGGHMNVNQGG
GGPAAAAAAAGAGGAGNGNGVAPVPQAPNAAGFNGGDWVTTGIPDGAQSF
LASAVAAAADSRPWPPPTPPQPSGNSTHRGAMLAGVEAASISSNGGSLTT
MGGMGASSGSMIGGRPSGGGGNTVLIHYEGHKSRYDEWIAVGSPRLAPYR
SRSARPLSVTMQSVQRLVKGMSVRCARGGA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR016197Chromo-like_dom_sf
IPR036047F-box-like_dom_sf