prot_F-serratus_M_contig1234.1768.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1234.1768.1
Unique Nameprot_F-serratus_M_contig1234.1768.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length401
Homology
BLAST of mRNA_F-serratus_M_contig1234.1768.1 vs. uniprot
Match: A0A6H5JIS8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS8_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 1.880e-72
Identity = 150/346 (43.35%), Postives = 195/346 (56.36%), Query Frame = 0
Query:   57 KVGQRRKSAVADAFDKFVRSRSDRAAGWEDASPEVVVEWLCFLDSQGNGTTIVHATSCPQVGQYSL-SCSDSALGCTRRYAFGSLQKSFVSKLKRAYVEILGRFEDWSPQDMRGNPVTGAVVDQYLAFTTQEQLRAGVTPKQATPILRPDFQHLMRDMHTGLLCAAQPGDRLAYARDMALFAVAFRAGSRGNDLAKLLAAQVLHLPSNQGLVLNFHFTKTLRDGAAHASLLAPDNVMPETCAVAAMLRYAQAAKSCDWDMSKGYLFPEIQDAGKHTPKRLARPLSAKAMAARFKEHLGRAGLGERKFTFHSFRVGCAVTQTIAGKDIAEIMAAVNWKSEKTARRYV 401
            + G+ RK  VAD FD F+ S S    GW  ASP+ VV+W  +LDSQG GT +VH  +C  VG     SCS  A  C +RY   SL+K F SKLK AY E LGR +DW+P    GNP     VD YL FTT+EQ R GVT KQA P+L      L+  M    L +    +R+A  RD+ALF++A  +  RG DL+  L +QVL LP ++G + NF F KTLR       +LA  N   + CAV A+  Y  AA+   WD+S GYLFP + D G     +L     A  M +  + HL  A L    F+ HSFRVG ++++++ G  I EIM    WK+E  A+ YV
Sbjct:  686 RAGEVRKHRVADEFDLFLLSYSGGGKGWVHASPDDVVDWFSYLDSQGKGTKLVHDATCAGVGSSDRRSCSPGAT-CKKRYGAESLRKGFYSKLKMAYKEQLGRGDDWNPTVGSGNPCASPTVDAYLTFTTEEQKRVGVTAKQAAPLLEDTLGELLPHMRLRALASDSMAERIAITRDVALFSLAHHSMRRGFDLSFTLGSQVLRLPESRGFIFNFLFGKTLRASTEAIVVLASTN--RDVCAVRAVAEYILAAQQVGWDLSSGYLFPSVLDDGSRGNSKLV----ATQMTSSLQAHLRAASLPAH-FSMHSFRVGGSLSRSMGGSAIEEIMQIGGWKTESMAKYYV 1023          
BLAST of mRNA_F-serratus_M_contig1234.1768.1 vs. uniprot
Match: UPI000A2A7226 (uncharacterized protein LOC110250634 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7226)

HSP 1 Score: 162 bits (409), Expect = 4.790e-42
Identity = 123/373 (32.98%), Postives = 183/373 (49.06%), Query Frame = 0
Query:   30 ENGATLLQVNESQLRTRYDQFRSFQKDKVGQRRKSAVADAFDKFVRSRSDRAAGWEDASPEVVVEWLCFLDSQGNGTTIVHATSCPQVGQYSLSCSDSALGCTRRYAFGSLQKSFVSKLKRAYVEILGRFEDWSPQDMRGNPVTGAVVDQYLAFTTQEQLRAGVTPKQATPILRPDFQHLMRDMHTGLLCAA-QPGDRLAYARDMALFAVAFRAGSRGNDLAKLLAAQVLHLPSNQGLVLNFHFTKTLRDGAAHASLLAPDNVMPETCAVAAMLRYAQAAKSCDWDMSKGYLFPEIQDAGKHTPKRLARPLSAKAMAARFKEHLGRAGLGERKFTFHSFRVGCAVTQTIAGKDIAEIMAAVNWKSEKTARRYV 401
            ++  T  +VN   +  R  Q R   ++    ++KS++   F+ F+RS   R   +  A+PE V  +L + D  G     VH  SCP +    ++       C RR AF ++  S+V KL+  + E  GR  DW+     GNP     V QYL   T+EQLRA + PKQATP+       L R     L  A+ QP +    ARD A F   F +  RG++L  +  +++L  P + GL+ N  + KTLRDG ++   +   +  P+ C V A+  Y   A     D+S GYLF      G    K     LS+ A   R K +L  A + E + T HSFR G A+T  ++G  +A++MA V W ++ TA  Y+
Sbjct:   11 QSSNTTAEVNIESIDERLLQLRESVQNSSYSKQKSSLRLEFETFLRSLXRRKCIFS-AAPEDVARFLVWKDPSGKKA--VHVBSCPNIASQKVT----TCACPRRLAFKTVD-SYVGKLRAIFNEA-GRTGDWNGMLGFGNPAASPEVQQYLKAVTEEQLRAHMRPKQATPLFLSKLLLLARLWDRKLANASTQPVNHFTLARDQAFFKALFFSFDRGSELGSVRTSEILRFPRDDGLLFNHVWGKTLRDGTSNVFGIRR-HANPQICPVRAIETYVATAAELRIDLSDGYLFRPTNHQGHIVNKAF---LSSTA-EGRLKTYLKEANIDEGE-TLHSFRAGXAITLALSGAQLADVMAHVGWSNKGTALYYM 368          
BLAST of mRNA_F-serratus_M_contig1234.1768.1 vs. uniprot
Match: UPI00106AFE02 (uncharacterized protein LOC114544373 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106AFE02)

HSP 1 Score: 93.2 bits (230), Expect = 9.500e-17
Identity = 71/254 (27.95%), Postives = 121/254 (47.64%), Query Frame = 0
Query:   28 PSENGATLLQVNESQLRTRYDQFRSFQKDKVGQRRKSAVADAFDKFVRSRSDRAAGWEDASPEVVVEWLCFLDSQGNGTTIVHATSCPQVGQYSLSCSDSALGCTRRYAFGSLQKSFVSKLKRAYVEIL--GRFEDWSPQDMRGNPVTGAVVDQYLAFTTQEQLRAGVTPKQATPILRPDFQHLMRDMHTGLLCA-AQPGDRLAYARDMALFAVAFRAGSRGNDLAKLLAAQVLHLPSNQGLVLNFHFTKTLRD 278
            PS +    ++++   +  R     + + +K  Q++KS +   F+ F+ S     +    A+PE ++ +L + D  G   T++H   CP  G   +        C RR A  ++  + ++KL+  ++      +  D  P     NP     V QYLA   +EQ +A ++PKQATP+    F+ L   +H  +      P     YARD+  F++ F +GSR +DL ++   QVL LP + G +    F KTLR+
Sbjct:  438 PSTSAPPRVRIDFPSINARLSLLHATRNEKPYQKQKSQLQTQFEAFMASLPSPKSILS-ATPEDIIRFLIWRDQFGK--TVIHHRICPHFG---VRDRQPPCDCPRRLAANTVDNN-IAKLRTIFLSARRPDQISDGLPPY---NPAAHPSVKQYLASICEEQAKATISPKQATPLFHDKFKVLCTHLHQRIRQHDLSPTLCYLYARDLGFFSIDFYSGSRASDLGRIHTKQVLTLPDSGGFLFRQTFGKTLRN 681          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1234.1768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JIS8_9PHAE1.880e-7243.35Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
UPI000A2A72264.790e-4232.98uncharacterized protein LOC110250634 n=1 Tax=Exaip... [more]
UPI00106AFE029.500e-1727.95uncharacterized protein LOC114544373 n=1 Tax=Dendr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006936ALOG domainPFAMPF04852DUF640coord: 68..181
e-value: 3.4E-7
score: 30.5
IPR002104Integrase, catalytic domainPFAMPF00589Phage_integrasecoord: 228..401
e-value: 1.1E-7
score: 31.8
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 196..401
e-value: 3.5E-26
score: 94.2
NoneNo IPR availablePANTHERPTHR31165:SF2PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4coord: 64..284
IPR040222ALOG familyPANTHERPTHR31165FAMILY NOT NAMEDcoord: 64..284
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 214..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1234contigF-serratus_M_contig1234:256627..257829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1234.1768.1mRNA_F-serratus_M_contig1234.1768.1Fucus serratus malemRNAF-serratus_M_contig1234 256627..257829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1234.1768.1 ID=prot_F-serratus_M_contig1234.1768.1|Name=mRNA_F-serratus_M_contig1234.1768.1|organism=Fucus serratus male|type=polypeptide|length=401bp
CHVCFHENDETYRFCQNCRGQAPRGCSPSENGATLLQVNESQLRTRYDQF
RSFQKDKVGQRRKSAVADAFDKFVRSRSDRAAGWEDASPEVVVEWLCFLD
SQGNGTTIVHATSCPQVGQYSLSCSDSALGCTRRYAFGSLQKSFVSKLKR
AYVEILGRFEDWSPQDMRGNPVTGAVVDQYLAFTTQEQLRAGVTPKQATP
ILRPDFQHLMRDMHTGLLCAAQPGDRLAYARDMALFAVAFRAGSRGNDLA
KLLAAQVLHLPSNQGLVLNFHFTKTLRDGAAHASLLAPDNVMPETCAVAA
MLRYAQAAKSCDWDMSKGYLFPEIQDAGKHTPKRLARPLSAKAMAARFKE
HLGRAGLGERKFTFHSFRVGCAVTQTIAGKDIAEIMAAVNWKSEKTARRY
V
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006936ALOG_dom
IPR002104Integrase_catalytic
IPR013762Integrase-like_cat_sf
IPR040222ALOG
IPR011010DNA_brk_join_enz