prot_F-serratus_M_contig1226.1724.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1226.1724.1
Unique Nameprot_F-serratus_M_contig1226.1724.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length260
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1226.1724.1 vs. uniprot
Match: D7FTU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU3_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 5.580e-23
Identity = 89/220 (40.45%), Postives = 115/220 (52.27%), Query Frame = 0 
Query:   48 AVHGVARVLQEPVGHVSARDLLLYVGKRSQKIFAAYAAGSGTRSNAEGDIDGDDCRGSVSSWSSAAARSDCSTVGXXXXXXXXXXXRRHRAATGLCFPL--FRGNLVDSGGGGSGSVVRKMVLLAGLAEVMWRMPRASMGPRDGGTAILALRDL-ATDREREGNKSRR--FCYYFATFPGKD--APGPSPGPSLARVLRALVYCQLRRGLFREVLETTRV 260
            AV+GVARVLQE   H ++R+LLL++G+RSQ++    + GS   SN           G+ S+       S  S+              +HR    LCFPL   R     SGGG        +VL    AEVMWR+ RASM  +D  TAILAL  L A +   +G  S R    YYFA+F  KD  A     GP  ARVLRAL + Q++RGL+R+ LET R+
Sbjct:  532 AVYGVARVLQESGDHAASRELLLFLGERSQEL----SGGSSPSSN-----------GATSAVHQGRRSSSRSSS------------HQHR----LCFPLEATRQGFQPSGGGXXXXXGALVVLPVAPAEVMWRVARASMAAKDWPTAILALEGLVAAEATADGVASSREGLAYYFASF-AKDGGARASRRGPGRARVLRALAFSQIQRGLYRDALETVRM 719
[Close]
BLAST of mRNA_F-serratus_M_contig1226.1724.1 vs. uniprot
Match: A0A6H5L1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V4_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.600e-20
Identity = 89/227 (39.21%), Postives = 112/227 (49.34%), Query Frame = 0 
Query:   48 AVHGVARVLQEPVGHVSARDLLLYVGKRSQKIFAAYAAGSGTRSNAEGDIDGDDCRGSVSSWSSAAARSDCSTVGXXXXXXXXXXXRRHRAATGLCFPLFRGNLVDSGGG-------------GSGSVVRKMVLLAGLAEVMWRMPRASMGPRDGGTAILALRDL-ATDREREGNKSRR--FCYYFATFP-GKDAPGPSPGPSLARVLRALVYCQLRRGLFREVLET 257
            AV+GVARVLQE   H ++R+LLL++G+RSQ++    + GS   SN           G+ S+       S  S+              +HR    LCFPL         GG              SG++    VL   LAEVMWR+ RASM  RD  TAILAL  L A +    G  S R    YYFA+F  G  A     GP  ARVLRAL Y Q++RGL+R+ LET
Sbjct:  548 AVYGVARVLQESGDHAASRELLLFLGERSQEL----SGGSLPSSN-----------GATSAVHQGRRNSSRSSS------------HQHR----LCFPLEARRQGFQPGGXXXXXXXXXXXXXASGALT---VLPVALAEVMWRVARASMAARDWPTAILALEGLVAAEATAGGEASPREGLAYYFASFAKGGGARASRRGPGRARVLRALAYSQIQRGLYRDALET 740
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1226.1724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTU3_ECTSI5.580e-2340.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1V4_9PHAE2.600e-2039.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1226contigF-serratus_M_contig1226:171064..176717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1226.1724.1mRNA_F-serratus_M_contig1226.1724.1Fucus serratus malemRNAF-serratus_M_contig1226 171063..176717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1226.1724.1 ID=prot_F-serratus_M_contig1226.1724.1|Name=mRNA_F-serratus_M_contig1226.1724.1|organism=Fucus serratus male|type=polypeptide|length=260bp
GVGARDARALAAWSAPVKGPSFPVRQAPAARAAAAVQPLQGEAAAARAVH
GVARVLQEPVGHVSARDLLLYVGKRSQKIFAAYAAGSGTRSNAEGDIDGD
DCRGSVSSWSSAAARSDCSTVGNVGNMGDRGHRRRHRAATGLCFPLFRGN
LVDSGGGGSGSVVRKMVLLAGLAEVMWRMPRASMGPRDGGTAILALRDLA
TDREREGNKSRRFCYYFATFPGKDAPGPSPGPSLARVLRALVYCQLRRGL
FREVLETTRV
back to top