prot_F-serratus_M_contig1223.1723.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1223.1723.1
Unique Nameprot_F-serratus_M_contig1223.1723.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1135
Homology
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BLAST of mRNA_F-serratus_M_contig1223.1723.1 vs. uniprot
Match: A0A7V8BJP2_9BURK (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7V8BJP2_9BURK)

HSP 1 Score: 59.7 bits (143), Expect = 1.440e-7
Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 0 
Query:    2 GSQSLDVATALDNWAGMVARQGEYTKAGALYERSLAIRQKVLGREHPD 49
            G++++DVATAL++ AG+    G+YT+A  LYERSLAI +K LG EHPD
Sbjct:   14 GAEAVDVATALNDLAGLFYGTGDYTRARPLYERSLAIYEKALGPEHPD 61
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1223.1723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7V8BJP2_9BURK1.440e-758.33Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 555..575
score: 50.0
coord: 511..528
score: 55.0
coord: 446..464
score: 34.74
coord: 590..611
score: 33.64
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 941..974
e-value: 1.8
score: 17.6
coord: 219..252
e-value: 85.0
score: 6.8
coord: 641..674
e-value: 0.49
score: 19.4
coord: 303..336
e-value: 0.12
score: 21.5
coord: 767..800
e-value: 0.46
score: 19.5
coord: 1067..1100
e-value: 55.0
score: 8.5
coord: 9..42
e-value: 210.0
score: 3.4
coord: 599..632
e-value: 20.0
score: 12.3
coord: 983..1016
e-value: 1.7
score: 17.6
coord: 683..716
e-value: 16.0
score: 13.1
coord: 515..548
e-value: 13.0
score: 13.9
coord: 809..842
e-value: 0.42
score: 19.7
coord: 557..590
e-value: 10.0
score: 15.0
coord: 51..84
e-value: 0.7
score: 18.9
coord: 261..294
e-value: 340.0
score: 1.5
coord: 1025..1058
e-value: 160.0
score: 4.4
coord: 473..506
e-value: 29.0
score: 10.9
coord: 429..464
e-value: 28.0
score: 11.0
coord: 135..168
e-value: 52.0
score: 8.7
coord: 177..210
e-value: 0.086
score: 22.0
coord: 725..758
e-value: 0.34
score: 20.0
coord: 899..932
e-value: 0.41
score: 19.7
coord: 387..420
e-value: 0.77
score: 18.8
coord: 345..378
e-value: 10.0
score: 14.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 257..406
e-value: 1.4E-47
score: 164.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 582..753
e-value: 1.1E-53
score: 184.1
coord: 867..1012
e-value: 4.4E-53
score: 182.2
coord: 415..581
e-value: 2.2E-55
score: 189.8
coord: 1..161
e-value: 2.1E-50
score: 173.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 755..801
e-value: 1.1E-7
score: 33.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 802..866
e-value: 6.2E-9
score: 37.6
coord: 166..254
e-value: 1.4E-12
score: 49.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1013..1124
e-value: 1.7E-19
score: 72.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 509..629
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 875..1097
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 129..248
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 381..534
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 256..376
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 617..841
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..116
NoneNo IPR availablePFAMPF13374TPR_10coord: 870..897
e-value: 3.7E-4
score: 20.3
coord: 982..1020
e-value: 0.0018
score: 18.1
coord: 599..637
e-value: 7.2E-6
score: 25.7
NoneNo IPR availablePFAMPF13424TPR_12coord: 385..463
e-value: 1.4E-16
score: 60.5
coord: 7..83
e-value: 6.6E-18
score: 64.8
coord: 176..250
e-value: 4.4E-16
score: 58.9
coord: 91..164
e-value: 1.2E-10
score: 41.5
coord: 723..799
e-value: 1.3E-16
score: 60.6
coord: 808..865
e-value: 3.1E-7
score: 30.6
coord: 1024..1098
e-value: 2.3E-13
score: 50.2
coord: 640..711
e-value: 3.2E-15
score: 56.2
coord: 513..586
e-value: 1.4E-15
score: 57.3
coord: 301..377
e-value: 1.8E-17
score: 63.4
coord: 901..973
e-value: 8.5E-17
score: 61.2
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 124..202
coord: 617..750
coord: 979..1117
coord: 484..625
coord: 4..160
coord: 247..341
coord: 869..1008
coord: 343..496
coord: 163..287
coord: 753..865
coord: 289..382
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 9..1100
score: 20.949

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1223contigF-serratus_M_contig1223:51348..71656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1223.1723.1mRNA_F-serratus_M_contig1223.1723.1Fucus serratus malemRNAF-serratus_M_contig1223 51343..74308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1223.1723.1 ID=prot_F-serratus_M_contig1223.1723.1|Name=mRNA_F-serratus_M_contig1223.1723.1|organism=Fucus serratus male|type=polypeptide|length=1135bp
MGSQSLDVATALDNWAGMVARQGEYTKAGALYERSLAIRQKVLGREHPDT
VAVLNNQASLLESQGMYAEAELLYEESQAIREKTLGREHPDVASSLSNKA
RLLTTQGRYEEAGHLYVIVTVMLEKALGPEHLDVAAALRNRAELFARQGK
YAEAGPLYERFQAISEKALGADHLEVAAALNSRAMLLENEGQYNEAEPLY
ERSQAVREKVLGPEHPDVATTLSNRARLLTTQGKLDEADGLYVRATGILE
KALDPEHPDVVAVLNSRAELLAGQGMSAEAGPLFRRIQAILEKLLGPDHL
DVATVLNNRAVLFAKEGKHAEAEHLYERSQAVKEKVLGPDHLDVATSLSN
RARLLTTQGMFAEADSLYERSQEIREKVLGPEHPDVAASLTNRARLLAAQ
GKYAEAGPLYEKAQAISETVHGPEHPDVATVLNNRAMLLENGVRGKYDEA
ESFFARATEILEKSLGPEHLDVAATLKHRAELFTRQGKYAEAESLLERYQ
AISEKVLGPDHPDVATVLNNRAILLEKEDKCLEAERLYDRSQAIRESVLG
PEHPDVATSLNKRARLLASQGKLDEAEPLYARATVILEKTLGLEHLDIAT
TLNNRAELLSKHGMHAEAGPLYERSLAILEKAHGPDHLEVAGALSNRAMT
LENEGKYTEAAPLYERSQAIREKALGPEHPDVATTLNSRARLLASQGMLD
EAERLYVRATVILEKALGLEHLDIAAALNNRAELFTRQGKYMEAESLFKR
SQAISEAVLGSDHLDVAMILVNRAMLLENEGKYAEAEPLYERSQAMRENA
LGLDHPDVGASLNHRGRLLTSQGKLNKAEALYVRAIEIFEEALGPENRDL
AGALSNRAELLTRQGSSILQGKLTEAEPLFRRSQAILEAVLGPDHPDVAA
ILNNRAILLESESKFDEAEPLYERSQAIREKALGPEHPDVATSLNNRARL
LTTQGKHDKAEPLHIRATEIYEKSLGPEHPHVAISLSNRARSLEDQGKYE
EADRLYLQAKQIGERSLPPDDGFLAKILYYRAGLMRKQGKNDKAEPLFAR
ATVMLEKALGPEHPDVAMALHNFASLLADQGKQDKARLNMERALTIRRAT
LGDSHEDTMKTSRELASLSQVESANVRHEDAPTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom