prot_F-serratus_M_contig1219.1700.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1219.1700.1
Unique Nameprot_F-serratus_M_contig1219.1700.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length374
Homology
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BLAST of mRNA_F-serratus_M_contig1219.1700.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.460e-17
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0 
Query:   74 KLRKSCDYCVRMKRACDGKTPCGLCTRRNKECTRSVKKKSGPAKGTKYAARRTRS 128
            +LRKSCDYCVR+KRACDGK PC LC RR+K CTRS +KKSGPAKGTKYA RR RS
Sbjct:    9 ELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRS 63
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BLAST of mRNA_F-serratus_M_contig1219.1700.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.470e-17
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0 
Query:   74 KLRKSCDYCVRMKRACDGKTPCGLCTRRNKECTRSVKKKSGPAKGTKYAARRTRS 128
            +LRKSCDYCVR+KRACDGK PC LC RR+K CTRS +KKSGPAKGTKYA RR RS
Sbjct:   17 ELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRS 71
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BLAST of mRNA_F-serratus_M_contig1219.1700.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 6.950e-16
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0 
Query:   72 EHK-LRKSCDYCVRMKRACDGKTPCGLCTRRNKECTRSVKKKSGPAKGTKYAARRTR 127
            EH+ LRKSCDYCVRMKR C G TPC LC RRNK C RS+KK+SGPAKGTKY  R+ R
Sbjct:   19 EHQALRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPR 75
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BLAST of mRNA_F-serratus_M_contig1219.1700.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.630e-15
Identity = 47/81 (58.02%), Postives = 55/81 (67.90%), Query Frame = 0 
Query:   52 SPTGILFNATDD-----EPSTPAATEHKLRKSCDYCVRMKRACDGKTPCGLCTRRNKECTRSVKKKSGPAKGTKYAARRTR 127
            SP G +  A  D     +P+T       LRKSCD CVR+KRACDG++PC LC RR + CTRSVK+KSGPAKGTKY  RR R
Sbjct:    7 SPAGEVVAAASDTGNEGQPTTDGGRV-LLRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR 86
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BLAST of mRNA_F-serratus_M_contig1219.1700.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 2.180e-15
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:   75 LRKSCDYCVRMKRACDGKTPCGLCTRRNKECTRSVKKKSGPAKGTKYAARRTR 127
            LRKSCD CVR+KRACDGK PC LC RR + CTRSVK+KSGPAKGTKY  RR+R
Sbjct:   62 LRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114
[Close]
BLAST of mRNA_F-serratus_M_contig1219.1700.1 vs. uniprot
Match: A0A6H5JII0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII0_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.020e-6
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:   85 MKRACDGKTPCGLCTRRNKECTRSVKKKSGPAKGTKYAARR 125
            MKRACDG +PC LC+RR K C R +++KSGPAKG KYA RR
Sbjct:    1 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRR 41
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1219.1700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L009_9PHAE1.460e-1780.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI1.470e-1780.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LKM5_ECTSI6.950e-1673.68Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
A0A6H5L7F3_9PHAE1.630e-1558.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPZ9_ECTSI2.180e-1577.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JII0_9PHAE1.020e-668.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 73..116
e-value: 0.0067
score: 24.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 77..112
e-value: 1.1E-5
score: 25.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 78..107
score: 8.951
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 76..153
e-value: 5.4E-6
score: 28.7
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 71..111
NoneNo IPR availablePANTHERPTHR31668FAMILY NOT NAMEDcoord: 64..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1219contigF-serratus_M_contig1219:126874..132942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1219.1700.1mRNA_F-serratus_M_contig1219.1700.1Fucus serratus malemRNAF-serratus_M_contig1219 126874..133436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1219.1700.1 ID=prot_F-serratus_M_contig1219.1700.1|Name=mRNA_F-serratus_M_contig1219.1700.1|organism=Fucus serratus male|type=polypeptide|length=374bp
MSDDRARRTASSRVEEVHTSLSSVSRPALLTAGSVGGSSDSLHDAIRRAT
SSPTGILFNATDDEPSTPAATEHKLRKSCDYCVRMKRACDGKTPCGLCTR
RNKECTRSVKKKSGPAKGTKYAARRTRSHDELRRSGHNDGSEAGSSSSSR
AALVGIRRTASSGDSYAHFPLGTMDSSQIHGTNYRFVPHASPRVAHRTPS
FPPGRLRFLPPGEVGVGVRREVNRDGVTGAASSSGVVIGEGVKDAGGGAG
VGVGFARRPGEEFSNQYHQLGDGGGSGGDGGGGGGNDTESQQLIRNFPGV
LQDPSIWTSPSPEELRIARDLEPDAFGRSINATSTGPSHPVYSRPSVTRG
SHSYNKAMDGQVATRAGNVSTMRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf