prot_F-serratus_M_contig1214.1685.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1214.1685.1
Unique Nameprot_F-serratus_M_contig1214.1685.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length100
Homology
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BLAST of mRNA_F-serratus_M_contig1214.1685.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 1.240e-21
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:    3 SLVILILGIAVHLASAHPHCHYDEREVDLEREMTFCSMEYAAEGVCCTELEEVALEDTYTAAIGDLTTECASYYKQVLCGVCGSYSGHLYERLTDDLG 100
            S+ I++LG  + L ++HP C+ D+R  D +  + FC    A  G CCT+ EE AL      A+G+LT +C   YKQV+CGVCGSYSGHLYERL  +LG
Sbjct:    9 SIAIMLLGALITLCASHPLCYVDDRPTDPDEILEFCPE--AQSGACCTDAEE-ALVQLRHEAVGNLTGDCDDLYKQVVCGVCGSYSGHLYERLGAELG 103
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BLAST of mRNA_F-serratus_M_contig1214.1685.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.930e-17
Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 0 
Query:    8 ILGIAVHLASAHPHCHYDEREVDLEREMTFCSMEYAAEGVCCTELEEVALEDTYTAAIGD---LTTECASYYKQVLCGVCGSYSGHLYERLTD 97
            +  +A    +AHP C  D++  D ++ +T+C    A  G CCT  EE  +E  + AA G     +T CA+ YKQV+CGVC SYS HLYE LTD
Sbjct:    7 LAALAATKVAAHPLCFIDDKPTDYDQVLTYCDNSIAMSGACCTNEEEDIVEANFNAAFGVGVVPSTACAALYKQVVCGVCHSYSAHLYEYLTD 99
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1214.1685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6T7_ECTSI1.240e-2148.98WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4P3_ECTSI1.930e-1744.09Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..100
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1214contigF-serratus_M_contig1214:97327..100360 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1214.1685.1mRNA_F-serratus_M_contig1214.1685.1Fucus serratus malemRNAF-serratus_M_contig1214 97327..100360 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1214.1685.1 ID=prot_F-serratus_M_contig1214.1685.1|Name=mRNA_F-serratus_M_contig1214.1685.1|organism=Fucus serratus male|type=polypeptide|length=100bp
MKSLVILILGIAVHLASAHPHCHYDEREVDLEREMTFCSMEYAAEGVCCT
ELEEVALEDTYTAAIGDLTTECASYYKQVLCGVCGSYSGHLYERLTDDLG
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