prot_F-serratus_M_contig1211.1673.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1211.1673.1
Unique Nameprot_F-serratus_M_contig1211.1673.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length460
Homology
BLAST of mRNA_F-serratus_M_contig1211.1673.1 vs. uniprot
Match: D8LDG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG0_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 3.640e-95
Identity = 185/427 (43.33%), Postives = 237/427 (55.50%), Query Frame = 0
Query:    2 GLVLEMDPVLHVELKRAMLTCLDWNTLDPSLLLAGASDGTVCVWKVSNGGGARVVGGVNKNVPPFKQFACSGIGIFEPADAFIRDVSWCPHSRDVFASTAQGNLLSVWELSTPFEPLCSFPRRNNRSEGAAIRWAPGRSGIWVSATSRPFLYFLDFFDGGIREVVYKGSRNVDRCSPGASKAEVKEKAQKNTESITANPVEDAVLGLDVLREDPTDPRADSEALLKQIHLVAWTAPSGQVRVTAAACRESSPWDHHRESAAFFETSWKSKRSQFMSLVENKAMHRVEYVHPSDNLVKGATSWPVEGGEKS----------------GAASRKASPL--------PFFRVFTGCHSEGIHTALPPPWKDTLAPLTGLLNCTRLVHVPRPPMKTAAPSTHDYARAKPKCVLLSGGHGGLVRCSTVPDQL 404
             +VL+  P+L   LK A L CLDW+  +P LLLAGASDGTVC+WKVS  GG     G   N PPF+QF+CS IG+ +   A + DV+WCP S ++FA+T  G++L+VW+ S  FEPLCS P +  R  G  +RW PG SGIWVSA++RPF++FLDFF+GG       G+ NV                Q+        P+EDA  GLDV+R+        S      IHL AWTAPSGQVRV+AA CRE +P  HH  +AAF E   KSK+SQ + L+E++ MHR+EYV P D LV     W    G++                 GA +R   P         P+ RVFTG  SEG+   L   W + + PL+GLL                APS+   + +   CVL+SGGHGGLVR S VP  L
Sbjct: 1198 AVVLKTKPILQARLKHAELMCLDWSPQEPDLLLAGASDGTVCIWKVSALGGEHGGEGTTGNHPPFRQFSCSAIGMCDVVQAVVNDVAWCPTSPNLFATTGAGHILTVWDTSDVFEPLCSIPVKTQRCSGTTVRWGPGGSGIWVSASTRPFIFFLDFFEGG-------GAGNVPAV------------VQEGRGVRDVVPLEDATYGLDVMRKPGQPDHGQS------IHLAAWTAPSGQVRVSAARCREVAPLQHHHLAAAFLEQCRKSKKSQRLQLLEHRVMHRLEYVRPGDRLVDQGDPWCTAEGDRVNDAAAAARTTWMLGAVGAGARAGPPSMGGGTAADPYLRVFTGAESEGL---LAIKWHEAMPPLSGLLE--------------KAPSSKAVS-SPGACVLVSGGHGGLVRVSVVPPHL 1581          
BLAST of mRNA_F-serratus_M_contig1211.1673.1 vs. uniprot
Match: A0A6H5JCY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY4_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 1.770e-82
Identity = 177/438 (40.41%), Postives = 237/438 (54.11%), Query Frame = 0
Query:    2 GLVLEMDPVLHVELKRAMLTCLDWNTLDPSLLLAGASD----------------GTVCVWKVSNGGGARVVGGVNKNVPPFKQFACSGIGIFEPADAFIRDVSWCPHSRDVFASTAQGNLLSVWELSTPFEPLCSFPRRNNRSEGAAIRWAPGRSGIWVSATSRPF----LYFLDFFDGGIREVVYK--GSRNVDRCSPGASKAEVKEKAQKNTESITANPVEDAVLGLDVLREDPTDPRADSEALLKQIHLVAWTAPSGQVRVTAAACRESSPWDHHRESAAFFETSWKSKRSQFMSLVENKAMHRVE--------YVHPSDNLVKGATSW---PVEGGEKSGAASRKASPL--PFFRVFTGCHSEGIHTALPPPWKDTLAPLTGLLNCTRLVHVPRPPMKTAAPSTHDYARAKPKCVLLSGGHGGLVRCSTVPDQL 404
             +VL+  P+LH  LK A + CLDW+  +P LLLAGASD                GTVC+WKVS  GG     G   N PP +QFACS IG+ +   A + DV+WCP S ++FA+T  G++L+VW+ S  FEPLCS P +  R  G ++RW PG  G+  +    P     L FL F  G +REV+Y+   +++     P      +    Q+        P+EDA  GLDV+R+        S      IHL AWTAPSGQ+RV+AA CRE +PW HH  +AAF      SK+SQ + L+E++ MHRVE            ++   +  TSW    V  G ++G  S        P+ RVFTG  SEG+   L   W + + PL+GLL+CTRLV +P    +  APS    + +   CVL+SGGHGGLVR S VP  L
Sbjct:  797 AVVLKTKPILHARLKHAEVMCLDWSPQEPDLLLAGASDDTTXXXXXXXXXXXAKGTVCIWKVSALGGEHGGEGTTGNHPPMRQFACSAIGMCDVVQAVVHDVAWCPTSPNLFATTGAGHILTVWDTSDVFEPLCSIPVKTQRCSGTSVRWGPG--GMMRNRLPTPISCWSLCFL-FSSGALREVLYRDHATQSFSAKGPRGGAENLPAVVQEGRGIRDVVPLEDATYGLDVMRKPGQPDHGQS------IHLAAWTAPSGQIRVSAARCREVAPWQHHHLAAAFPGQCRGSKKSQRLQLLEHRVMHRVEGDPWCTAKVDRFNEAAAQARTSWMLGAVGAGARAGPPSMGGGTAADPYLRVFTGAESEGL---LAIKWHEAMPPLSGLLHCTRLVRIPP---QEKAPSFKAVS-SPGACVLVSGGHGGLVRVSVVPPHL 1218          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1211.1673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDG0_ECTSI3.640e-9543.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCY4_9PHAE1.770e-8240.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 70..110
e-value: 3.6
score: 13.5
coord: 8..46
e-value: 0.044
score: 22.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 12..279
e-value: 1.5E-15
score: 59.1
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 18..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1211contigF-serratus_M_contig1211:235730..243194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1211.1673.1mRNA_F-serratus_M_contig1211.1673.1Fucus serratus malemRNAF-serratus_M_contig1211 235705..243490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1211.1673.1 ID=prot_F-serratus_M_contig1211.1673.1|Name=mRNA_F-serratus_M_contig1211.1673.1|organism=Fucus serratus male|type=polypeptide|length=460bp
MGLVLEMDPVLHVELKRAMLTCLDWNTLDPSLLLAGASDGTVCVWKVSNG
GGARVVGGVNKNVPPFKQFACSGIGIFEPADAFIRDVSWCPHSRDVFAST
AQGNLLSVWELSTPFEPLCSFPRRNNRSEGAAIRWAPGRSGIWVSATSRP
FLYFLDFFDGGIREVVYKGSRNVDRCSPGASKAEVKEKAQKNTESITANP
VEDAVLGLDVLREDPTDPRADSEALLKQIHLVAWTAPSGQVRVTAAACRE
SSPWDHHRESAAFFETSWKSKRSQFMSLVENKAMHRVEYVHPSDNLVKGA
TSWPVEGGEKSGAASRKASPLPFFRVFTGCHSEGIHTALPPPWKDTLAPL
TGLLNCTRLVHVPRPPMKTAAPSTHDYARAKPKCVLLSGGHGGLVRCSTV
PDQLLKIRTPRPTERSRNKVARMKVAAAAAAAVARKTVAEATTTTSKKNA
SASTNTAGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf