prot_F-serratus_M_contig1211.1664.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1211.1664.1
Unique Nameprot_F-serratus_M_contig1211.1664.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length141
Homology
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BLAST of mRNA_F-serratus_M_contig1211.1664.1 vs. uniprot
Match: D8LDF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 3.090e-13
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0 
Query:    1 MAVLFSFSLAQAWWCDLLEKNRWEDTIKKPWVFGVVPVTAIIISALGRIRGLE 53
            + VLF+FSLAQA+WC++L  +R+E+  K PW+FGV+ +T IIISALGRI GLE
Sbjct:   50 LVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLE 102
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1211.1664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDF3_ECTSI3.090e-1362.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 8..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 13..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..49
NoneNo IPR availableTMHMMTMhelixcoord: 30..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1211contigF-serratus_M_contig1211:60647..62069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1211.1664.1mRNA_F-serratus_M_contig1211.1664.1Fucus serratus malemRNAF-serratus_M_contig1211 59911..62208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1211.1664.1 ID=prot_F-serratus_M_contig1211.1664.1|Name=mRNA_F-serratus_M_contig1211.1664.1|organism=Fucus serratus male|type=polypeptide|length=141bp
MAVLFSFSLAQAWWCDLLEKNRWEDTIKKPWVFGVVPVTAIIISALGRIR
GLESGRRLRVFRCPVDAVHPRPDRRRVLHLVALRACLHDPRGDPLHLRRQ
GRGHQEARGQLARHVHGQPRGAGPLVYPVHVLPHHRGQRV*
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