prot_F-serratus_M_contig120.1593.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig120.1593.1
Unique Nameprot_F-serratus_M_contig120.1593.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length191
Homology
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BLAST of mRNA_F-serratus_M_contig120.1593.1 vs. uniprot
Match: A0A6H5K094_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K094_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 7.210e-40
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 0 
Query:    1 MEQVFFRLHVRFVTTVTRLLSPKVRRVLEYVTLGNAFCLLLSLAWLHTRFVNPKG-KGSAVSCLPAALERAGVDPAQIHVLQIHLRRP 87
            MEQVFFRLHVRFVTTVTRLLSPK RR+LEYVTL NAF L+ SLAWLHTRFVNPKG +GSAVSCLPAALE+AGVDPAQ+HVLQIH+R+P
Sbjct:    1 MEQVFFRLHVRFVTTVTRLLSPKTRRLLEYVTLANAFLLVTSLAWLHTRFVNPKGSQGSAVSCLPAALEKAGVDPAQLHVLQIHIRQP 88
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BLAST of mRNA_F-serratus_M_contig120.1593.1 vs. uniprot
Match: D8LLK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK2_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.150e-39
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 0 
Query:    1 MEQVFFRLHVRFVTTVTRLLSPKVRRVLEYVTLGNAFCLLLSLAWLHTRFVNPKGK-GSAVSCLPAALERAGVDPAQIHVLQIHLRRP 87
            MEQVFFRLHVRFVTTVTRLLSPK RR+LEYVTL NAF L+ SLAWLHTRFVNPKG+ GSAVSCLPAALE+AGVDPAQ+HVLQIH+R+P
Sbjct:    1 MEQVFFRLHVRFVTTVTRLLSPKTRRLLEYVTLANAFLLVTSLAWLHTRFVNPKGRQGSAVSCLPAALEKAGVDPAQLHVLQIHIRQP 88
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BLAST of mRNA_F-serratus_M_contig120.1593.1 vs. uniprot
Match: A0A7S2WVH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVH7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.020e-7
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0 
Query:    1 MEQVFFRLHVRFVTTVTRLLSPKVRRVLEYVTLGNAFCLLLSLAWLHTRFVNPKGKGSAVSCLPAALE-RAGVDPAQIHVLQIHLRRP 87
            MEQVFFRLHVR V T+TR  SP  RRV+EY  L  +  L   +  LHTR + P+  G     +P  ++  + ++  Q+ +++I   RP
Sbjct:    1 MEQVFFRLHVRCVRTITRACSPTFRRVVEYGLLALSVGLCSLVVALHTRHIAPRDGGCLQGLVPDPVDPMSSLNETQLLLIRILEPRP 88
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BLAST of mRNA_F-serratus_M_contig120.1593.1 vs. uniprot
Match: A0A1D6GL22_MAIZE (Uncharacterized protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6GL22_MAIZE)

HSP 1 Score: 51.6 bits (122), Expect = 5.240e-5
Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0 
Query:    2 EQVFFRLHVRFVTTVTRLLSPKVRRVLEYVTLGNAFCLLLSLAWLHTRFVNPKGKGSAVSCLPAALERAGVDPAQIHVLQIHL 84
            EQ F R+H R   T+++LL+P++R VLEY+ L  A  L   L  +HT FV   G  S         E +G++  +  ++QI +
Sbjct:    4 EQTFLRVHARLSGTLSQLLTPRIRLVLEYLYLAGAVALFCLLVVMHTNFVQQPGCSS---------EFSGIEFGEAQLVQIKI 77
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig120.1593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K094_9PHAE7.210e-4086.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLK2_ECTSI1.150e-3986.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2WVH7_9STRA4.020e-739.77Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1D6GL22_MAIZE5.240e-534.94Uncharacterized protein n=1 Tax=Zea mays TaxID=457... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019144MembralinPFAMPF09746Membralincoord: 2..52
e-value: 8.2E-6
score: 25.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig120contigF-serratus_M_contig120:601925..606894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig120.1593.1mRNA_F-serratus_M_contig120.1593.1Fucus serratus malemRNAF-serratus_M_contig120 601723..606894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig120.1593.1 ID=prot_F-serratus_M_contig120.1593.1|Name=mRNA_F-serratus_M_contig120.1593.1|organism=Fucus serratus male|type=polypeptide|length=191bp
MEQVFFRLHVRFVTTVTRLLSPKVRRVLEYVTLGNAFCLLLSLAWLHTRF
VNPKGKGSAVSCLPAALERAGVDPAQIHVLQIHLRRPPDDRGGGGKSNRN
GSGNSGGEGASRRCVHRGGGGSGGQKGKETKASSPPLLSLSLSLPDGGSA
GSSDQGGDVNFGQGGGSRGASAGDEEERSSVGAGAGEIFHG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019144Membralin