prot_F-serratus_M_contig12.1539.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig12.1539.1
Unique Name	prot_F-serratus_M_contig12.1539.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	96

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig12.1539.1 vs. uniprot
Match: A0A6H5KDZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ3_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 1.140e-29
Identity = 62/96 (64.58%), Postives = 70/96 (72.92%), Query Frame = 0

Query:    1 MLGLLDRSTLPDWYEKEYARLARSGRRVIALAHRTLGPSGGVKGVKEKEAMALPRHDVEREGFLTFDGFLSFHCKTRVDSHAVIRGLREVGGCAST 96
            M  LLD   LPDWYE+EY RLAR+GRRV+ALAHR+LGPS   KG K     +L R +VE+EG L FDGFLSFHCKTR DS  VIR LR  GGC+ T
Sbjct:    1 MKALLDNEGLPDWYEEEYDRLARTGRRVVALAHRSLGPSKS-KGAKAA-LTSLSRAEVEKEGSLVFDGFLSFHCKTRADSKRVIRDLRRAGGCSVT 94

[Close]

BLAST of mRNA_F-serratus_M_contig12.1539.1 vs. uniprot
Match: D8LFD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD5_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 1.200e-29
Identity = 63/96 (65.62%), Postives = 70/96 (72.92%), Query Frame = 0

Query:    1 MLGLLDRSTLPDWYEKEYARLARSGRRVIALAHRTLGPSGGVKGVKEKEAMALPRHDVEREGFLTFDGFLSFHCKTRVDSHAVIRGLREVGGCAST 96
            M  LLD   LPDWYE+EY RLARSGRRV+ALAHR+LGPS   KG K   A +L R + E+EG L FDGFLSFHCKTR DS  VIR LR  GGC+ T
Sbjct:  927 MKPLLDDEVLPDWYEEEYDRLARSGRRVVALAHRSLGPSKS-KGAKAALA-SLSRAEAEKEGSLVFDGFLSFHCKTRADSKRVIRDLRHAGGCSVT 1020

[Close]

BLAST of mRNA_F-serratus_M_contig12.1539.1 vs. uniprot
Match: A0A0L0DKD0_THETB (P-type ATPase superfamily n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DKD0_THETB)

HSP 1 Score: 60.5 bits (145), Expect = 1.450e-8
Identity = 35/84 (41.67%), Postives = 45/84 (53.57%), Query Frame = 0

Query:    8 STLPDWYEKEYARLARSGRRVIALAHRTL-GPSGGVKGVKEKEAMAL-PRHDVEREGFLTFDGFLSFHCKTRVDSHAVIRGLRE 89
            S L  WY   Y RLA+ G+RV+ALAH+ + GP G        E +    R  +E +  L FDGF+ F C  R DS  V+  LRE
Sbjct:  745 SGLSSWYNATYQRLAKDGKRVLALAHKVVSGPRGDAAVATAAEQLFEGSRSSIESD--LVFDGFIVFSCAVRADSRDVVAELRE 826

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig12.1539.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig12.1539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KDZ3_9PHAE	1.140e-29	64.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LFD5_ECTSI	1.200e-29	65.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A0L0DKD0_THETB	1.450e-8	41.67	P-type ATPase superfamily n=1 Tax=Thecamonas trahe...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45630	FAMILY NOT NAMED	coord: 8..90
None	No IPR available	PANTHER	PTHR45630:SF6		coord: 8..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig12	contig	F-serratus_M_contig12:493298..495054 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig12.1539.1	mRNA_F-serratus_M_contig12.1539.1	Fucus serratus male	mRNA	F-serratus_M_contig12 493298..495069 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig12.1539.1 ID=prot_F-serratus_M_contig12.1539.1|Name=mRNA_F-serratus_M_contig12.1539.1|organism=Fucus serratus male|type=polypeptide|length=96bp
MLGLLDRSTLPDWYEKEYARLARSGRRVIALAHRTLGPSGGVKGVKEKEA
MALPRHDVEREGFLTFDGFLSFHCKTRVDSHAVIRGLREVGGCAST