prot_F-serratus_M_contig1199.1525.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1199.1525.1
Unique Nameprot_F-serratus_M_contig1199.1525.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length628
Homology
BLAST of mRNA_F-serratus_M_contig1199.1525.1 vs. uniprot
Match: A0A6H5JGF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF5_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 2.780e-107
Identity = 247/581 (42.51%), Postives = 312/581 (53.70%), Query Frame = 0
Query:  121 LTPQKGARGGLIAAGAACGVLSAVNFFSAAKHQLRLG-PRSTPLRKFLLTELVGSLGAGFIAGVKLASGYLVLRGLVELLPNQPLQPVLALFLGLP------NDHDSGARE------AGMLTVTYLVFLSTALNFALHLVSAVIMNLIILAPQDFVRLWGAKSSSASTARQ-------SSWPLPQSPSAMLLDMLCIGHEAALWAAEKDFLKERESGG----------SSYTPGSMGDWKEELELQRRSLALTSMGTSAGTGQRSG-----------WAVVTATWLPVWAQVAKAQALQSIALQAPRDVGIRAALYEVNITQVLRALCLELDSTNLLVQSFRLRENPSAVASSLGCEGRGDLGWLAQKMMSSSSAGSSSMGGPYRRALQYVQVRFTLPFRDTL-----FSVLLALWSSG------GREQEREARPGEGPEKPTLSSARAQSTVWAAQGVSALMVHAPGESRHVVLDAMLPVVLGSLAGLLLAVRSCSA------------QEAASDDRPEGSYARALAGHRT----------LALELEKALSEVAQKYRGCLGEYRFPPAYAEVINSLCSA 627
            L    GA GGL+A GAAC   SAV F    +H LRLG P    +  +L  E  GS   G + G  + +GYLV+R + ELL    +   L++ LGL          D G  +       G L V YL+ +STA NFALH     +MN II+A QDF+RLW A   +AS  +        ++  +P SP+AMLLD L IGHE  L  AE+DFL+ R  GG          SSYT G M DW EE ELQRR++AL  M       +R G           ++      +PVWAQVAKAQALQS+AL+AP D  +R ALYEVNI QVLR LCLE+D  +LL+Q+  + E+ +  A +LGCEGRGD+ WL + M       +SS G   RR L ++    TLPF  TL      +VL  L +S       GR  E E   GE      LS AR QST+WA QG+SAL+V+APGESR   LD MLPVVLGSL+GLLLAV+  S             +EA S +  +                      L   LE+AL+ V+ KYR CL + RFPP YAE IN  C++
Sbjct:  232 LAETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGAAMPAYLRGEACGSAKEGLLCGAVIGAGYLVVRTVSELLTGSMVGRALSVLLGLSAAASTSEGADGGGGQPTVGEGVGRLLVAYLIVVSTAANFALHGFLTKLMNFIIVASQDFLRLWQATVDAASDEQDRAGGRPAAAANVPASPAAMLLDSLSIGHETVLRTAERDFLQARGLGGGNGGAGGHEASSYTRGPMSDWTEETELQRRAVALACMEPPRTERRRGGGVGVRGIVRMPFSYTRGVVVPVWAQVAKAQALQSLALRAPCDKNLRVALYEVNIAQVLRTLCLEVDEASLLLQASAVGEDKAEAARALGCEGRGDIKWLVESM-------ASSRGEAGRRWLGWLNDGLTLPFSGTLTLAGLIAVLRPLMASNASGSGRGRGGEEEGGVGE-----VLSPARLQSTIWAVQGMSALVVNAPGESRMWSLDTMLPVVLGSLSGLLLAVQDRSRGQGXXXXXXXXXREAVSTEGVQXXXXXXXXXXXXXXXXXXXXXLLVAALEEALARVSSKYRSCLPDLRFPPVYAETINRFCAS 800          
BLAST of mRNA_F-serratus_M_contig1199.1525.1 vs. uniprot
Match: D8LU93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU93_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 1.440e-98
Identity = 259/644 (40.22%), Postives = 338/644 (52.48%), Query Frame = 0
Query:    1 MSMPVDCPPVARGSGPWLREAHYKRQLAFALS-VGIPTFTWEVMMSLC------TAFP--RFFGDLQSLLMAWTSFVVAAFARYSVSEV-------------SALTVSQPSSVRAVAVMVAHAVAGFPLGLCAWKVV--RAGAKLTPQKGARGGLIAAGAACGVLSAVNFFSAAKHQLRLG-PRSTPLRKFLLTELVGSLGAGFIAGVKLASGYLVLRGLVELLPNQPLQPVLALFLGLPN------DHDSGARE------AGMLTVTYLVFLSTALNFALHLVSAVIMNLIILAP--------QDFVRLWGAKSSSASTARQSSWPLPQSPSAMLLDMLCIGHEAALWAAEKDFLKERE----SGG------SSYTPGSMGDWKEELELQRRSLALTSM-----------GTSAGTGQ--RSGWAVVTATWLPVWAQVAKAQALQSIALQAPRDVGIRAALYEVNITQVLRALCLELDSTNLLVQSFRLRENPSAVASSLGCEGRGDLGWLAQKMMSSSSAGSSSMGGPYRRALQYVQVRFTLPFRDTL-----FSVLLALWSSG------GREQEREARPGEGPEKPTLSSARAQSTVWAAQGVSALMVHAPGESRHVVLDAMLPVVLGSLAGLLLAVRSCS 565
            M++PV+    A  S   L+  H +R +AF +  VG    +W +++ LC      T  P  R   D  S+++      +A F+RY V +              S   ++ P+  + +A +VAH + G  LG  AW     R    +    GA GGL+A GAAC   SAV F    +H LRLG P    +  +L  E  GS+  G + G  + +GYLVLR + ELLP   +   L++ LGLP+        D G  +       G L V YL+  STA NFALH     +MN II+A         QD  R  G  +++AS        +P SP+AMLLD L IGHE  L  AE+DFL+ R     SGG      SSYT G M DW EE ELQRR++AL  M           G   G G   R  ++      +PVWAQVAKAQALQS+AL+AP D  +R ALYEVNI QVLR LCLE+D  +LL+Q+  + E+ +  A +LGCEGR D+ WL + M       +SS G   RR L ++    +LPF  TL      +VL  L +S       GR  E +   GE      LS AR QST+WA QG+SAL+V APGESR   LD MLPVVLGSL+GLLLAV+  S
Sbjct:    1 MAVPVE-EFFAGSSSTALKRVHRQRLMAFGVVLVGCTLVSW-ILVILCWQLMPSTRGPGSRILADFLSIMVVALCHSLAVFSRYLVCDADDAPRRRAASGGFSYSALALPNLGQGLATVVAHWLIGMALGFFAWNFAAPRGAGGIAETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGAAMPAYLRGEAYGSVKEGLLCGAVIGAGYLVLRTVSELLPGSMVGRALSVLLGLPSAASTSEGTDGGGGQPVVGEGVGRLLVAYLIVASTAANFALHGFLTKVMNFIIVAATVDAASDEQD--RAGGRPAAAAS--------VPVSPAAMLLDSLSIGHETVLRTAERDFLQARGLDGGSGGAGGHGASSYTRGPMSDWTEETELQRRAVALACMEPPRTERRRGGGVGVGVGGIIRMPFSYTRGVVVPVWAQVAKAQALQSLALKAPCDKNLRVALYEVNIAQVLRTLCLEVDEASLLLQASVVGEDKAEAARALGCEGRRDIKWLVESM-------ASSRGEAGRRWLGWLNDGLSLPFSGTLTLAGLVAVLRPLMTSNASGSGRGRGGEEDGGVGE-----VLSPARMQSTIWAVQGMSALVVCAPGESRMWSLDTMLPVVLGSLSGLLLAVQDRS 620          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1199.1525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGF5_9PHAE2.780e-10742.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU93_ECTSI1.440e-9840.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 541..561
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 562..627
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 151..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 110..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 257..540
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..256
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 90..112
NoneNo IPR availableTMHMMTMhelixcoord: 233..255
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 60..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1199contigF-serratus_M_contig1199:265178..276137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1199.1525.1mRNA_F-serratus_M_contig1199.1525.1Fucus serratus malemRNAF-serratus_M_contig1199 264632..276227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1199.1525.1 ID=prot_F-serratus_M_contig1199.1525.1|Name=mRNA_F-serratus_M_contig1199.1525.1|organism=Fucus serratus male|type=polypeptide|length=628bp
MSMPVDCPPVARGSGPWLREAHYKRQLAFALSVGIPTFTWEVMMSLCTAF
PRFFGDLQSLLMAWTSFVVAAFARYSVSEVSALTVSQPSSVRAVAVMVAH
AVAGFPLGLCAWKVVRAGAKLTPQKGARGGLIAAGAACGVLSAVNFFSAA
KHQLRLGPRSTPLRKFLLTELVGSLGAGFIAGVKLASGYLVLRGLVELLP
NQPLQPVLALFLGLPNDHDSGAREAGMLTVTYLVFLSTALNFALHLVSAV
IMNLIILAPQDFVRLWGAKSSSASTARQSSWPLPQSPSAMLLDMLCIGHE
AALWAAEKDFLKERESGGSSYTPGSMGDWKEELELQRRSLALTSMGTSAG
TGQRSGWAVVTATWLPVWAQVAKAQALQSIALQAPRDVGIRAALYEVNIT
QVLRALCLELDSTNLLVQSFRLRENPSAVASSLGCEGRGDLGWLAQKMMS
SSSAGSSSMGGPYRRALQYVQVRFTLPFRDTLFSVLLALWSSGGREQERE
ARPGEGPEKPTLSSARAQSTVWAAQGVSALMVHAPGESRHVVLDAMLPVV
LGSLAGLLLAVRSCSAQEAASDDRPEGSYARALAGHRTLALELEKALSEV
AQKYRGCLGEYRFPPAYAEVINSLCSA*
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