prot_F-serratus_M_contig1197.1514.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1197.1514.1
Unique Nameprot_F-serratus_M_contig1197.1514.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length230
Homology
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: A0A6H5KCK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK6_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 8.190e-61
Identity = 119/162 (73.46%), Postives = 127/162 (78.40%), Query Frame = 0
Query:   80 SRSLSSS------TPLFDDTVIVTKRCAKRVNELRTVKSQPNLRLRLSVEGGGCSGFQYKFFLEDAA------TMERTDENAADDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
            SR LSS+      T LF DT+IVTKRCA+R+NELR  K+QP+L+LRLSVEGGGCSGFQYKF LEDAA                  XXXXXXX    HEFERDGAVLVVD TSLEFVKGATVDFEEDMMRSAFAV+NNPVSESACGCGSSFALKNFEKNPALD
Sbjct:   76 SRQLSSAASAAAPTLLFGDTIIVTKRCAERLNELRQAKAQPDLKLRLSVEGGGCSGFQYKFSLEDAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEFERDGAVLVVDATSLEFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPALD 237          
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: A0A835ZPC5_9STRA (Fe-S_biosyn domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC5_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.110e-43
Identity = 92/170 (54.12%), Postives = 110/170 (64.71%), Query Frame = 0
Query:   62 HLQYVRGADVMPTARRPPSRSLSSSTPL-FDDTVIVTKRCAKRVNELRTVKS-QPNLRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAADDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
            H  +VR    + T R+  S S SS  P   DD VIVTK CA+R+N+LR  +     LRLRLSVEGGGCSGFQY F ++D    E  D                D  FERDGA +V+D  SL FVKGATVDF++DMMR+AF+V+NNP SE+ACGCGSSFA+K FE NPA D
Sbjct:   78 HSGHVRQNRCLSTQRQSESTSNSSIGPQSLDDAVIVTKSCAERINQLRKRRGGDAPLRLRLSVEGGGCSGFQYTFTMDDGTGDEEIDTP--------------DIIFERDGAQVVIDEVSLGFVKGATVDFQQDMMRAAFSVLNNPNSENACGCGSSFAVKAFEANPARD 233          
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: A0A4D9DG01_9STRA (Fe-S_biosyn domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG01_9STRA)

HSP 1 Score: 150 bits (379), Expect = 5.410e-43
Identity = 80/140 (57.14%), Postives = 96/140 (68.57%), Query Frame = 0
Query:   90 FDDTVIVTKRCAKRVNELRTVKSQPNLRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAADDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
             D+ V+VT  C KR+  L+    + NL+LRLSVEGGGCSGF Y F +ED            DD          D  + R+GA +VVD  SLEFV+G+TVDF EDMMRSAFAVV+NP+SESACGCGSSFA+KNFEKNPA+D
Sbjct:    3 LDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVE--------DD----------DKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAIKNFEKNPAID 124          
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: W7UC88_9STRA (Iron-sulfur cluster assembly 2 mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC88_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.210e-42
Identity = 83/151 (54.97%), Postives = 103/151 (68.21%), Query Frame = 0
Query:   80 SRSLSSSTPL-FDDTVIVTKRCAKRVNELRTVKSQPNLRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAADDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
            S ++S+S  +  D+ V+VT  C KR+  L+    + NL+LRLSVEGGGCSGF Y F +ED            DD          D  + R+GA +VVD  SLEFV+G+TVDF EDMMRSAFAVV+NP+SESACGCGSSFA+KNFEKNPA+D
Sbjct:   61 SNAVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVE--------DD----------DKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMKNFEKNPAID 193          
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: A0A7S2RUW2_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUW2_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.160e-39
Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 0
Query:   86 STPLFDDTVIVTKRCAKRVNELRTVKSQPNLRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAADDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
            ST   +D ++VTK CA+R+ EL+   S   ++LRL+VEGGGCSGFQY+F ++     E  DE             E D  FERDGA +V+D  SLEFV GATVDF E+M+RS+F VVNNP SESACGCGSSFALK F  NPA+D
Sbjct:   34 STASLED-IVVTKSCARRILELQKESSSEYVKLRLTVEGGGCSGFQYQFHMD----SEPVDE-------------EEDSVFERDGASVVIDEASLEFVTGATVDFVEEMIRSSFVVVNNPNSESACGCGSSFALKAFSDNPAVD 159          
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: A0A7S3NJQ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJQ0_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.560e-38
Identity = 79/138 (57.25%), Postives = 95/138 (68.84%), Query Frame = 0
Query:   92 DTVIVTKRCAKRVNELRTVKSQPNLRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAADDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
            D +IVT   AKR+  L+T   + + RLRL V+GGGCSGFQY F  E AAT +                AE D  F RDG  +VVD TSLEFV+GATVD++E+M+RSAF V+NNP SESACGCGSSFALKNF+ NPA+D
Sbjct:   26 DGLIVTAAAAKRIAVLKTNDGEAS-RLRLGVDGGGCSGFQYTFTTE-AATAK---------------LAEDDSVFSRDGHDVVVDETSLEFVRGATVDYQEEMIRSAFVVINNPNSESACGCGSSFALKNFDSNPAID 146          
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: D7G8E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E7_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.280e-36
Identity = 86/156 (55.13%), Postives = 93/156 (59.62%), Query Frame = 0
Query:   80 SRSLSSS------TPLFDDTVIVTKRCAKRVNELRTVKSQPNLRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAADDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
            SR LSS+      T LF DT+IVTKRCA+ V   +  +            GGG  G   +  L                            EFERDGAVLVVD TSLEFVKGATVDFEEDMMRSAFAV+NNPVSESACGCGSSFALKNFEKNPALD
Sbjct:   13 SRQLSSAASAAAPTVLFGDTIIVTKRCAE-VKRAQRGQDAAGPEAPAFGGGGGVLGVSVQVLLGRRGGGS---------------------EFERDGAVLVVDATSLEFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPALD 146          
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: A0A7S2CX78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CX78_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.010e-35
Identity = 72/138 (52.17%), Postives = 91/138 (65.94%), Query Frame = 0
Query:   94 VIVTKRCAKRVNELRT--VKSQPNLRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAADDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
            +I+TK CA+R+  L      + P+  LRLSVEGGGCSGFQY F L+ +                       D  FERDG+ +V D +SLEFV+G+T+DF ++M+RS+FAVVNNP SESACGCGSSFALK+F  NPALD
Sbjct:   42 LIITKSCARRIANLNAHAADTSPSKYLRLSVEGGGCSGFQYSFELDGSELGPE------------------DLTFERDGSRVVTDESSLEFVRGSTIDFTQEMIRSSFAVVNNPNSESACGCGSSFALKSFSDNPALD 161          
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: B8BT66_THAPS (Fe-S_biosyn domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT66_THAPS)

HSP 1 Score: 127 bits (318), Expect = 3.380e-33
Identity = 69/137 (50.36%), Postives = 93/137 (67.88%), Query Frame = 0
Query:   96 VTKRCAKRVNELRTVKSQPN-LRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAA--DDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
            +T  CA R+ +L + +  P+ + LRL V+ GGCSGFQYKF L      E  D N +  DD        + D  F +DG  +VVD TSLE ++G+T+D+ ++M+RS+FAV++NP SESACGCGSSFA+KNFE NPALD
Sbjct:   39 ITASCAARIKQLASTRPNPDSIYLRLYVDAGGCSGFQYKFLL----LSEDNDMNNSLEDDEEDGAIDPDEDIIFVKDGMRVVVDQTSLELLRGSTIDYVQEMIRSSFAVMSNPQSESACGCGSSFAVKNFETNPALD 171          
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Match: A0A7S2G7Q7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7Q7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.180e-32
Identity = 65/118 (55.08%), Postives = 80/118 (67.80%), Query Frame = 0
Query:  112 SQPNLRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAADDXXXXXXXAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFAVVNNPVSESACGCGSSFALKNFEKNPALD 229
            + P+  LRLSVEGGGCSGFQY F L+ +                       D  FERDG+ +V D +SLEFV+G+T+DF ++M+RS+FAVVNNP SESACGCGSSFALK+F  NPALD
Sbjct:    6 TSPSKYLRLSVEGGGCSGFQYSFELDGSELGPE------------------DLTFERDGSRVVTDESSLEFVRGSTIDFTQEMIRSSFAVVNNPNSESACGCGSSFALKSFSDNPALD 105          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1197.1514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCK6_9PHAE8.190e-6173.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZPC5_9STRA1.110e-4354.12Fe-S_biosyn domain-containing protein n=1 Tax=Trib... [more]
A0A4D9DG01_9STRA5.410e-4357.14Fe-S_biosyn domain-containing protein n=1 Tax=Nann... [more]
W7UC88_9STRA2.210e-4254.97Iron-sulfur cluster assembly 2 mitochondrial-like ... [more]
A0A7S2RUW2_9STRA1.160e-3955.56Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S3NJQ0_9STRA3.560e-3857.25Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D7G8E7_ECTSI2.280e-3655.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2CX78_9STRA1.010e-3552.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B8BT66_THAPS3.380e-3350.36Fe-S_biosyn domain-containing protein n=1 Tax=Thal... [more]
A0A7S2G7Q7_9STRA2.180e-3255.08Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000361FeS cluster biogenesisPFAMPF01521Fe-S_biosyncoord: 96..214
e-value: 1.5E-8
score: 34.8
IPR035903HesB-like domain superfamilyGENE3D2.60.300.12coord: 93..219
e-value: 1.5E-28
score: 100.9
IPR035903HesB-like domain superfamilySUPERFAMILY89360HesB-like domaincoord: 93..203
IPR016092FeS cluster insertion proteinTIGRFAMTIGR00049TIGR00049coord: 95..218
e-value: 1.1E-24
score: 84.6
NoneNo IPR availablePANTHERPTHR43011:SF1IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIALcoord: 33..220
NoneNo IPR availablePANTHERPTHR43011FAMILY NOT NAMEDcoord: 33..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1197contigF-serratus_M_contig1197:262538..271274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1197.1514.1mRNA_F-serratus_M_contig1197.1514.1Fucus serratus malemRNAF-serratus_M_contig1197 261931..271390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1197.1514.1 ID=prot_F-serratus_M_contig1197.1514.1|Name=mRNA_F-serratus_M_contig1197.1514.1|organism=Fucus serratus male|type=polypeptide|length=230bp
MVTPLRSLCSKLLSSSSIRNRFGASAVSVPLNIRSHRRQLSEQSQSSTSR
DFRQTRPHARYHLQYVRGADVMPTARRPPSRSLSSSTPLFDDTVIVTKRC
AKRVNELRTVKSQPNLRLRLSVEGGGCSGFQYKFFLEDAATMERTDENAA
DDDEEDEDDAEIDHEFERDGAVLVVDNTSLEFVKGATVDFEEDMMRSAFA
VVNNPVSESACGCGSSFALKNFEKNPALD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000361FeS_biogenesis
IPR035903HesB-like_dom_sf
IPR016092FeS_cluster_insertion