prot_F-serratus_M_contig1195.1493.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1195.1493.1
Unique Nameprot_F-serratus_M_contig1195.1493.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length794
Homology
BLAST of mRNA_F-serratus_M_contig1195.1493.1 vs. uniprot
Match: D7FJN4_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN4_ECTSI)

HSP 1 Score: 764 bits (1972), Expect = 3.070e-249
Identity = 475/846 (56.15%), Postives = 544/846 (64.30%), Query Frame = 0
Query:    1 MSGPTQRLPFLSASEEACLRPGPSGRVAGVASAQDFFTLFLRDASEFAGLYHASLGDRAYKEWPWEEDGQKQYDGSLRKVQFMSPVRNAPAMSNETRVEEEQRWVSRGHTQGILEIRRKLPVLRDGKRFVVLVRWALTFDGFSCNLAVSCGTLFFKPSSHAKEIREGCGRGYAQSVKRWFVQAEKYAKTHGHVQLMRTSSXXXXXXXXXXXXXXXXXXXXSKDKKEGKCMSGRVPVLEAMRSSVGSSNSIQLSKCHAFLGEYIYLTREIKRVIQGEAAGDLVLEEDLKTGGGGIPVGQEEHGSGLDGLESRKGRGP-GPQSSGDMEDSTAISSAMSHVSVESARSGSWSGSVVGGFGFVDYPAGIPPKQWGRVQDRTVRWLQRSMGVDNSAVSGGAPAGHSNRERSGSVLSGST-FSTGGSRLS-----------LRLQASSNPFGSVSGGSGGGGRVASGEPSSPGTSSSKEDDVLHLKWLEQLRVVSQREKDPPALESNQEHQQKLQASGD------------------------------------ITAGVSDVYLTQTQVQGGGFDAVFDGEEAGPAGDAGETEA-------TEVLIYQVKLTFGDGXXXXXXXXXKVVATAALTDPAARKAA-------AAHRPYTVVFHGRRLGLQLRELHDIPIVGGLEGYDPDGARDGREYGEASLMDDDXXXXXDGPPVEVSPEPSAFDELSLALLGPPGGG----RG-DDIQTIYGGSGGAGGGLGTETSSVLDSQSDYDVTVKCIVQCPQLFGEGVKKLWRWRPAGGPAANASDEPSNPNAALEAFMKGLKQRLGLGEGSPGVTVSYLDMDVGGG 778
            MSGPTQRLPFL+A+EEACLRPGPSGRV GVA+A DFFTLFLRDASEF+G YH ++GDR  +EWPWEEDGQ+QY+GSLRKV FMSPVRNAP +SNETRVEEEQRWVSRGH Q  LEIRR+LP LRDG+RFVV VRW + +DGF C+LAV CGTLF+KPSS+AKEIREGC RGYA SVKRWFVQAEKY K HG VQL ++   XXXXXXXXXXXX           ++GK MSGRV                                  +KRVIQGEAAGDLVLEEDLK GG GIP+GQE  G+GLDGL  ++GR P GP  SGD+E+S    SAMSHV+VESARSGSWSGS+VGGFGFVDYPAGIPPKQWGR+QDRTVRWL RSMG + +  +  A    ++RE  GSV+SGST FS GG R                         V G  G         P SPG  S +EDDV+H KWLEQLRVV Q +K          HQ+   +SG                                              +     +G G D+    E     G    TE         +V   + K   GDG              A +TDPAA + A       AA +PYTV+FHGRRLG+QLRE+H IPIVGGL+GYDPDG +D R  GE    DD      DG PVEVSPEPSAFDELSLA LG  GGG    RG DD+QTIYGGSGGAGGG+GTETSS++DSQSDYDVTVKCIVQC QLFGEGVKKLWRW+PA  PAA+ +D+ ++P+ A+ AFMKGL  RLGLGE +PGV VSYLDM+VG G
Sbjct:    1 MSGPTQRLPFLTAAEEACLRPGPSGRVLGVATAGDFFTLFLRDASEFSGQYHTTMGDRGLEEWPWEEDGQRQYEGSLRKVHFMSPVRNAPELSNETRVEEEQRWVSRGHAQATLEIRRRLPELRDGRRFVVAVRWVMKYDGFGCSLAVFCGTLFYKPSSYAKEIREGCVRGYALSVKRWFVQAEKYVKAHGAVQLRQSKDGXXXXXXXXXXXX-----------RDGKKMSGRV----------------------------------VKRVIQGEAAGDLVLEEDLKIGGAGIPIGQEGAGAGLDGL--KEGRRPKGPYMSGDLEES----SAMSHVTVESARSGSWSGSIVGGFGFVDYPAGIPPKQWGRIQDRTVRWLIRSMGGNTNTAAVVAATHAASRENEGSVVSGSTSFSAGGGRSGRPSSXXXXXXXXXXXXXXXXXAGVPGVEG---------PPSPGAVSIREDDVVHAKWLEQLRVVWQGDKKEXXXXEGS-HQRSSPSSGKEAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPEGEEGSGKDSDGVAEAKQDEGAPSSTEQGGGGVPEEDVSSEENKSGDGDGGGSGDRP------VAGVTDPAAAEGALTAGRRAAAEKPYTVLFHGRRLGIQLREMHKIPIVGGLQGYDPDGTQDSR--GEDGEDDDGSEEEIDGLPVEVSPEPSAFDELSLARLGTLGGGSAAGRGADDLQTIYGGSGGAGGGMGTETSSMMDSQSDYDVTVKCIVQCSQLFGEGVKKLWRWKPA--PAAS-NDDAADPSVAVSAFMKGLSVRLGLGEDNPGVRVSYLDMEVGDG 774          
BLAST of mRNA_F-serratus_M_contig1195.1493.1 vs. uniprot
Match: A0A6H5KV84_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV84_9PHAE)

HSP 1 Score: 754 bits (1946), Expect = 2.280e-246
Identity = 455/788 (57.74%), Postives = 523/788 (66.37%), Query Frame = 0
Query:   55 LGDRAYKEWPWEEDGQKQYDGSLRKVQFMSPVRNAPAMSNETRVEEEQRWVSRGHTQGILEIRRKLPVLRDGKRFVVLVRWALTFDGFSCNLAVSCGTLFFKPSSHAKEIREGCGRGYAQSVKRWFVQAEKYAKTHGHVQLMRTSSXXXXXXXXXXXXXXXXXXXXSKDKKEGKCMSGRVPVLEAMRSSVGSSNSIQLSKCHAFLGEYIYLTREIKRVIQGEAAGDLVLEEDLKTGGGGIPVGQEEHGSGLDGLESRKGRGP-GPQSSGDMEDSTAISSAMSHVSVESARSGSWSGSVVGGFGFVDYPAGIPPKQWGRVQDRTVRWLQRSMGVDNSAVSGGAPAGHSNRERSGSVLSGST-FSTGGSR----LSLRLQASSNPFGSVSGGSGGGGRVASGEPSSPGTSSSKEDDVLHLKWLEQLRVVSQREKDPPALESNQEHQQKLQASGDITAGVSDVYLTQTQVQGGGFDAVFDGEEAGPAGDAGETEATEVL----------------------------------------------IYQVKLTFGDGXXXXXXXXXKVVATAALTDPAARKAA-------AAHRPYTVVFHGRRLGLQLRELHDIPIVGGLEGYDPDGARDGREYGEASLMDDDXXXXXDGPPVEVSPEPSAFDELSLALLGPPGGG----RG-DDIQTIYGGSGGAGGGLGTETSSVLDSQSDYDVTVKCIVQCPQLFGEGVKKLWRWRPAGGPAANASDEPSNPNAALEAFMKGLKQRLGLGEGSPGVTVSYLDMDVGGG 778
            +GDR  +EWPWEEDGQ+QY+GSLRKV FMSPVRNAP +SNETRVEEEQRWVSRGH Q  LEIRR+LP LRDG+RFVV VRW + +DGF C+LAV CGTLF+KPSS+AKEIREGC RGYA SVKRWFVQAEKY K HG VQL ++   XXXXXXX                  GK  SGRVPVLEAMRSSVGSSNSIQLSKCH FLGEYIYLTRE+KRVIQGEAAGDLVLEEDL  GG GIP+GQE  G+GLDGL  ++GR P GP  SGD+E+S    SAMSHV+VESARSGSWSGS+VGGFGFVDYPAGIPPKQWGR+QDRTVRWL RSMG + +  +  A    +NRE  GSV+SGST FS GG R     SL         G       G   V    P SPG  S +EDDV+H KWLEQLRVV Q +K     +  +E +Q+  +             +  ++         +GE++    + G+T+  E                                                +   +   GDG              A +TDPAA + A       AA +PYTV+FHGRRLG+QLRE+H IPIVGGL+GYDPDG +D R  GE    D       DG PVEVSPEPSAFDELSLA LG  GGG    RG DD+QTIYGGSGGAGGG+GTETSS++DSQSDYDVTVKCIVQC QLFGEGVKKLWRW+PA  PAA+ SDE ++P+ A+ AFMKGL  RLGLGE +PGV VSYLDM+VGGG
Sbjct:    1 MGDRGLEEWPWEEDGQRQYEGSLRKVHFMSPVRNAPELSNETRVEEEQRWVSRGHAQATLEIRRRLPELRDGRRFVVAVRWVMKYDGFGCSLAVFCGTLFYKPSSYAKEIREGCVRGYALSVKRWFVQAEKYVKAHGAVQLRQSKDGXXXXXXXEGGY--------------GKKTSGRVPVLEAMRSSVGSSNSIQLSKCHKFLGEYIYLTREVKRVIQGEAAGDLVLEEDLTIGGAGIPIGQEGAGAGLDGL--KEGRRPKGPYMSGDLEES----SAMSHVTVESARSGSWSGSIVGGFGFVDYPAGIPPKQWGRIQDRTVRWLIRSMGGNTNTAAVVAATHAANRENEGSVVSGSTSFSAGGGRGGRPSSLXXXXXXXXVGKXXXXXAGVPGVEG--PPSPGAVSIREDDVVHAKWLEQLRVVWQGDK-----KEEEEGKQQRPSPSSCKEAXXXXXXSTDEID---KTTSKEGEDSKDKSEDGDTDTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEQEVSSEEKQSGDGDHGGSGDKP----VAGVTDPAAAEVALTAGRRAAAEKPYTVLFHGRRLGIQLREMHKIPIVGGLQGYDPDGTQDSR--GEDGEDDGGSEEEIDGLPVEVSPEPSAFDELSLARLGTLGGGSIAGRGADDLQTIYGGSGGAGGGMGTETSSMMDSQSDYDVTVKCIVQCSQLFGEGVKKLWRWKPA--PAAS-SDEAADPSVAVSAFMKGLSVRLGLGEDNPGVRVSYLDMEVGGG 749          
BLAST of mRNA_F-serratus_M_contig1195.1493.1 vs. uniprot
Match: A0A835YQM7_9STRA (VPS9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM7_9STRA)

HSP 1 Score: 161 bits (407), Expect = 8.560e-37
Identity = 92/210 (43.81%), Postives = 120/210 (57.14%), Query Frame = 0
Query:    1 MSGPTQRLPFLSASEEACLRPGPSGRVAGVASAQDFFTLFLRDASEFAGLYHASLGDRAYKEWPWEEDGQKQYDGSLRKVQFMSPVRNAPAMSNE-------TRVEEEQ-------------RWVSRGHTQG--ILEIRRKLPVLRDGKRFVVLVRWALTFDGFSCNLAVSCGTLFFKPSSHAKEIREGCGRGYAQSVKRWFVQAEKYAK 188
            MSGPTQ LPFL ASEEACLR     RV GV S  +F+TL L  +SEFAG  H  LGDR  +E PW+EDG +QY G +R+V F S VR AP            TRVEEEQ              + ++ +  G   LE+RR L  L DG +F V+ +WA++FDGF   + + CG  F  PS  A  +  GC +GY  + ++W   AE++A+
Sbjct:    1 MSGPTQFLPFLCASEEACLRDVGCARVRGVTSPSEFYTLLLASSSEFAGAVHRGLGDRDVREEPWQEDGYQQYAGLVRRVHFKSAVRGAPTSDEGADDRRSFTRVEEEQTTAGAXXXXXXXXHFTAKPNRLGGATLEVRRALRDLVDGDKFRVIAKWAVSFDGFGTTVRLHCGVHFRAPSDLAAALSVGCVKGYTHTFEKWCRLAERFAR 210          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1195.1493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJN4_ECTSI3.070e-24956.15VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KV84_9PHAE2.280e-24657.74VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YQM7_9STRA8.560e-3743.81VPS9 domain-containing protein n=1 Tax=Tribonema m... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031968VASt domainPFAMPF16016VAStcoord: 31..165
e-value: 5.2E-9
score: 36.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1195contigF-serratus_M_contig1195:233808..260644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1195.1493.1mRNA_F-serratus_M_contig1195.1493.1Fucus serratus malemRNAF-serratus_M_contig1195 233722..283118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1195.1493.1 ID=prot_F-serratus_M_contig1195.1493.1|Name=mRNA_F-serratus_M_contig1195.1493.1|organism=Fucus serratus male|type=polypeptide|length=794bp
MSGPTQRLPFLSASEEACLRPGPSGRVAGVASAQDFFTLFLRDASEFAGL
YHASLGDRAYKEWPWEEDGQKQYDGSLRKVQFMSPVRNAPAMSNETRVEE
EQRWVSRGHTQGILEIRRKLPVLRDGKRFVVLVRWALTFDGFSCNLAVSC
GTLFFKPSSHAKEIREGCGRGYAQSVKRWFVQAEKYAKTHGHVQLMRTSS
SSKERKNGEDDEEEEGEEKKSKDKKEGKCMSGRVPVLEAMRSSVGSSNSI
QLSKCHAFLGEYIYLTREIKRVIQGEAAGDLVLEEDLKTGGGGIPVGQEE
HGSGLDGLESRKGRGPGPQSSGDMEDSTAISSAMSHVSVESARSGSWSGS
VVGGFGFVDYPAGIPPKQWGRVQDRTVRWLQRSMGVDNSAVSGGAPAGHS
NRERSGSVLSGSTFSTGGSRLSLRLQASSNPFGSVSGGSGGGGRVASGEP
SSPGTSSSKEDDVLHLKWLEQLRVVSQREKDPPALESNQEHQQKLQASGD
ITAGVSDVYLTQTQVQGGGFDAVFDGEEAGPAGDAGETEATEVLIYQVKL
TFGDGGGGGGNGDSKVVATAALTDPAARKAAAAHRPYTVVFHGRRLGLQL
RELHDIPIVGGLEGYDPDGARDGREYGEASLMDDDEDDDEDGPPVEVSPE
PSAFDELSLALLGPPGGGRGDDIQTIYGGSGGAGGGLGTETSSVLDSQSD
YDVTVKCIVQCPQLFGEGVKKLWRWRPAGGPAANASDEPSNPNAALEAFM
KGLKQRLGLGEGSPGVTVSYLDMDVGGGRASTCRWTGKPGTTS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031968VASt